KEGG   Ficedula albicollis (collared flycatcher): 101810967
Entry
101810967         CDS       T02815                                 
Symbol
SMU1
Name
(RefSeq) DNA replication regulator and spliceosomal factor
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
fab  Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:fab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:fab03041]
    101810967 (SMU1)
Spliceosome [BR:fab03041]
 Complex B
  Other components
   Complex B specific factors
    101810967 (SMU1)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_EML WD40_Gbeta Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_ACSF4 LisH_TPL Beta-prop_VPS8 Beta-prop_Vps41 Beta-prop_TEP1_C Ge1_WD40 WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 Beta-prop_NWD2_C Beta-prop_Aladin Beta-prop_NUP159_NUP214 Beta-prop_WDR41 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_SCAP Beta-prop_WDR75_2nd WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_BBS7 Beta-prop_IP5PC_F Beta-prop_DCAF12 DUF7165 Beta-prop_RSE1_2nd TFIIIC_delta VPS8_N Beta-prop_NOL10_N PROPPIN LisH LisH_PAC1
Other DBs
NCBI-GeneID: 101810967
NCBI-ProteinID: XP_005061154
LinkDB
Position
Z:43167121..43182005
AA seq 599 aa
MRQARDPYHQPFTHTRAQPLLRLDSVLFPAAVGEAWYERGYENTQPKDCSGAGGETRRPR
GREGAEGCGRRSPGPGRAACVCGALGERAVRFPRSVIRLIMQYLKENSLHRALATLQEET
TVSLNTVDSIESFVADINSGHWDTVLQAIQSLKLPDKTLIDLYEQVVLELIELRELGAAR
SLLRQTDPMIMLKQTQPERYIHLENLLARSYFDPREAYPDGSSKEKRRAAIAQALAGEVS
VVPPSRLMALLGQALKWQQHQGLLPPGMTIDLFRGKAAVKDVEEEKFPTQLSRHIKFGQK
SHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFSR
DTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQILSASFDQTIRIH
GLKSGKTLKEFRGHSSFVNEATFTQDGHYIISASSDGTVKVWNVKTTECSNTFKSLGSTA
GTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRG
EWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP
NT seq 1800 nt   +upstreamnt  +downstreamnt
atgaggcaagctagagacccctatcaccagccgtttacccataccagagctcagcccctg
ctgcggctcgattcggtcctcttccctgcagctgtgggggaggcttggtatgaaagagga
tatgaaaacacccagcctaaggactgcagcggtgcaggaggcgagacccggcggcctcgg
ggtcgtgagggggcagagggttgcgggcggcgctcgccggggccggggagggcggcctgt
gtgtgcggtgccctgggtgagcgtgcggtgcgctttccccgcagcgtgatccggctcatc
atgcagtacctgaaggaaaacagcctccaccgggcgctcgccacccttcaggaggagacc
accgtgtccctcaacaccgtggacagcatagagagcttcgtggcagacatcaacagtggg
cactgggacacggtgctgcaagccatacagtctctgaagctgcccgacaagaccctcatt
gatctctatgagcaggtcgtgctggagttgatcgagctccgggagctgggtgctgccagg
tctctgctgaggcagacagatcccatgatcatgctgaaacaaactcagccagaacgctac
atccacctcgaaaaccttctggccagatcttacttcgatcctcgcgaggcatacccagat
gggagcagcaaagagaagcggagagctgctattgcacaagctttggctggagaggtcagc
gtggtgcctccatctcgtctcatggcattgctggggcaggcattgaaatggcagcagcac
cagggcctgcttcctcccggtatgacaattgacttgttcagaggcaaagcagctgtgaaa
gacgtggaagaagagaagttccccacgcagctgagcaggcatattaagtttgggcagaaa
tcacatgtggagtgtgctcggttttctccagatggacagtatctggttactggctcagtt
gatggcttcattgaagtctggaacttcactactggaaagattaggaaggatctgaagtac
caggcacaagataatttcatgatgatggatgatgcagtgctgtgcatgtgcttcagtaga
gatacagaaatgctagcaactggagcacaagatggaaagatcaaggtgtggaaaatccag
agcggtcagtgtctgagaagatttgaacgagctcacagtaaaggtgttacgtgcctcagt
ttctctaaagacagcagccaaattcttagtgcttcttttgatcagacaatcaggattcat
ggtttaaaatctgggaaaaccctgaaggaattccgtggtcattcttcctttgtcaatgaa
gctacttttactcaggatggccactatattatcagtgcctcctctgatggcacagtcaag
gtttggaatgtgaagacaacagagtgctccaacaccttcaaatctcttggcagcactgct
gggacagacattactgtgaacagtgtcattctgctgcctaaaaacccagaacactttgtt
gtttgcaacaggtcgaatacagttgtcatcatgaatatgcaaggacaaattgtaagaagc
tttagctctggtaagagagaaggtggtgactttgtctgctgtgcactttctcctcgtggt
gaatggatctactgcgttggtgaagattttgtgctgtactgtttcagcacagtgacgggc
aagctggagagaactctaactgtccatgaaaaagatgtcattggcattgcacatcacccc
caccagaacctgattgccacttacagtgaagatggcctcctcaagctctggaagccatag

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