Ficedula albicollis (collared flycatcher): 101811007
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Entry
101811007 CDS
T02815
Symbol
DENND4A
Name
(RefSeq) DENN domain containing 4A
KO
K20163
DENN domain-containing protein 4
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fab04131
]
101811007 (DENND4A)
Membrane trafficking [BR:
fab04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
101811007 (DENND4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR_long
PPR_3
PPR
Papo_T_antigen
Motif
Other DBs
NCBI-GeneID:
101811007
NCBI-ProteinID:
XP_005051757
UniProt:
U3K635
LinkDB
All DBs
Position
10:4350843..4402496
Genome browser
AA seq
1885 aa
AA seq
DB search
MEDKGARVADYFVVAGLTDISKPLEEEIHFNDACHKIAKPKEPITDVTVLNKTLGEEVPQ
GYKCIDVTPSGLSADLNNGSLVGPQMYLCYRRGRDKPPLTDLGVLYDGKERVKQGCEIIQ
STPYGRLANISGSASSQRVYITYRRASENMTQNTLAVTDICIIIPSKGETPPHTFCKVDK
NLNNSMWGSAVYLCYKKSVAKTNTISYKAGLICRYPEEDYESFPLPESVPLFCLPMGATI
ECWPSNSKYPLPVFSTFVLTGASAEKVYGAAIQFYELYPEENLTEKQKSQLGLAAAVEGK
DTCRTVQTNKCICLLSHWPFFDAFKKFLTFLYRYSISGPHVLPIEKHISHFMHKVPFPSP
QRPRILVQLSPHDNLILSQPVSSPLPLSGGKFSTLLQNLGPENAVTLLVFAVTEHKILIH
SLRPSVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGIDSRYFDLYDPP
PDVSCVDLDTNTISQTGDKKAIAWKILPKKPCKNLMNTLNTLYQQLAELQQRPREDAFME
LAMNDYDFNSGKKLHLLDLEIQEAFLCFMASILKGYRSYLRPITEAPSETATDASSLFEL
QGFLKSRDRSHQKFYTLMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKVDMDKTGETR
LIELDESYKSEHTVFITPPEIPHLPNGEEHPLQYSYNGFPVLKLELFERPEGFLTAPNNK
LSSKASSPNSPSPMFRRTKQEIKSAHKIAKKYSSIPQMWSRCLLRHCYGLWFICLPAYVK
VCHSKVRALRTAYDVLQKMHTKKIDPPDEVCYRVLMQLCGQYGQPVLAVRVLFEMQKAGI
DPNAITYGYYNKAVLESTWPSSNRGGYFLWMKIRNVVLGIAQFKKALKKLPASTAHPSVP
GGLSDTANNTSLKEEAKQGKTCLQDIQEQKEDKRESDSSSLSEVESTKGSGDCLPKLNYQ
NSRNDKATSSIVRLNGTVDNTVAEGNRESSVGLLFTSSFEDANEAEVIKNKSLRKRHKSA
VEADLREMPWESRNRNLSGDGLVGLMINRINQEANPGEIVEKLGADAKILSSALQKSIRP
KTLNIRSSSLESKRESLEKESSDEDAAFDCSFTDKTESPVIFDLEDLDAEPETPTAVKTS
SEKSKRLQRKSSFPVKPVEKTDVETGFDPLSLLVAETEQQKEEEEEDDDRSVSTPSARRD
LAEEIVMYMNNMSSPLSSRAPSIELQKPFDDRNASKRSPTIIQPCRRSSLPPNSPRPPSL
TKSKSYHSKNEERPRDRLWSSPAYSPNSPAKEQPQDTTSALTLVSSPSFNLDTLLTPKFD
VLKSSMFSAGKGVAEKASKWYSKFAMYAASAKDQNSDRASVSSLGALDSESTSLTDEDVC
NDFESASPQENTTSEIKGISISKTSLESSASHDSSAKQFDQCGSLSKFPLPDKSELVSSC
STSSTSVFQNYAMEVLISSCSRCRTCDCLVHDEEIMAGWTADDSNLNTTCPFCGNLFLPF
LSIEIRDLRRPGRYFLKSSPSTENMQVPSLFSNQSGRSCNTTATVGLTTSVMPVQEDINS
NSKSKQHDSVYARSIQIPSGRRQNASGSECTSHPVARSISTFGPLEEDEKENQISHIIPT
GSLPATLQGPTDSLGLEWRLPSPDPITVPYLSPLVVWKELESLLENEGDHAITVADFVDH
HPIVFWNLVWYFRRLDLPSNLPGLILSSEHCNKNSKIPRNCMSEDSKYVLIQMLWDNMKL
HQDPRQPLYILWNAQSQNRTLLFETQKYPMVQLLQKDDDSFNQELLRSMVKSIKMNDVYG
PMSQILERLNKWPHIKRQRSLYREILFLSLVALGRDNIDIDAFDREYKMAYDRLTANQVK
NTHNCDRPPSTGVMECRKIFGEPYL
NT seq
5658 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaaaggggcccgtgttgctgattactttgttgtggcaggactaacggatatc
tcaaagccgctggaggaggagatccacttcaacgatgcctgccataaaatcgccaagccc
aaggagcccatcacagatgtgacagtccttaataaaaccctgggggaggaggttccccag
ggctataaatgcatagatgtcactccctcgggcctgtctgcagatctcaataacggcagc
ctggtaggaccacagatgtacctttgttatcggcgagggagggataagcctccacttact
gatttgggggttttatatgacgggaaagaaagagtaaagcaaggctgtgaaatcattcag
agcaccccgtacgggcggcttgccaacatcagcggcagcgcctcgtcccagcgcgtgtac
atcacctaccgcagggcctccgagaacatgacccagaacaccctggctgtcactgacatc
tgcatcatcatccccagcaaaggagagactcctccacacaccttctgcaaggtggacaag
aatctgaataacagcatgtggggctctgcagtatatttgtgttataaaaagtctgtggca
aaaaccaacaccatatcatacaaagctggtttaatatgcagatatcctgaagaagattat
gaatcattcccattaccagaatctgtgcctcttttttgtctccctatgggtgcaacaatt
gaatgttggccatctaacagtaaataccctctcccagttttttctacatttgtactaact
ggagcttctgcagaaaaggtatatggtgctgctattcagttttatgaattgtatcctgag
gagaacctcacagagaaacaaaaatctcagctgggattagcagctgctgtcgagggaaaa
gacacgtgcagaacagtgcagacaaataaatgcatctgtctgctctctcactggcctttc
tttgatgctttcaagaagtttcttaccttcctgtatcgttactccatttctgggccacat
gtcctccccattgagaaacacatttcccatttcatgcataaagtaccttttccatcccct
cagaggccaagaattctggtgcagctatctccacacgataacctgattcttagccagcct
gtgtcatcaccactcccactgagtggtggcaagttttctacactacttcagaatttagga
cctgaaaatgcagtaactctgctggtgtttgctgtgacagaacataaaatcctcatccac
tcattgcgaccttctgtcctcacgagcgtgacagaggcattggtctctatgatctttcct
ttccactggccttgcccatatattcctctgtgtcccttggcactggcagatgtgctgagt
gccccgtgcccattcatagtgggaattgattccagatactttgatctctatgacccccca
cctgatgtcagctgtgttgacctggataccaacacaatttctcaaactggagacaagaaa
gctattgcatggaagatcttaccaaagaaaccttgtaaaaatctgatgaacacgttaaat
actttatatcagcaactggcagaattgcaacagcgaccaagagaagatgcattcatggaa
ttggcaatgaatgattatgattttaattctgggaagaaattgcatctattggatttggag
atccaggaagcatttctctgtttcatggcttcaatcctgaaaggttacaggtcttatctc
aggccaataacagaggcaccctctgaaacagccacagatgcaagttctctctttgaacta
caaggattcctgaagagcagagaccgttcccatcagaagttctacaccctgatgaccaaa
acccagatgttcattcgcttcattgaggaatgctcttttgtcagtgacaaggatgccagc
cttgccttctttgatgactgtgtggataaagtagatatggacaaaactggggaaacacga
cttatagagctggatgagtcctacaagagtgagcacacagttttcataacaccccctgag
atccctcatctgccaaacggggaagagcaccctctacaatacagctataatggatttcca
gtattaaagctagaattgtttgaacgacctgaaggatttctcacagcaccaaataacaaa
ctgtcctcaaaagccagtagccccaacagcccatcaccaatgttcagaagaactaaacag
gaaattaaatctgctcacaaaattgcaaagaagtactcctccatcccccagatgtggtcc
aggtgtttgctccgccactgctacggcctttggttcatctgcctccctgcctatgtgaaa
gtctgccactccaaagtcagggctctgagaactgcttatgatgtgctacaaaaaatgcac
accaaaaaaatagatccacctgatgaggtgtgctacagggtgctcatgcagctgtgtggg
cagtacgggcagcccgtgctggcagtcagggtgctcttcgaaatgcagaaggctggcatc
gaccccaatgccatcacctatggctactacaacaaggctgttttggaaagcacctggcct
tcaagcaatcgaggtggctatttcctctggatgaaaattcgaaatgttgtcttaggaata
gcacagtttaaaaaagcattgaaaaagctaccagcaagcactgcacatccatctgttcct
gggggactttcagacactgccaataacacatcactcaaagaagaagccaagcaagggaaa
acttgtcttcaagatatccaagaacaaaaggaggacaagagagagagtgactccagttct
ctgtctgaagtggagagcacaaaagggagtggggactgcctgcccaaactgaattaccag
aactccaggaatgacaaagccacttccagcattgtgcggctcaacggcaccgttgacaat
actgtggcagaagggaacagggagagttctgtaggattgctgtttacatcatcttttgag
gatgctaatgaagcagaagttataaaaaataaatccttaagaaaaagacataaaagtgca
gtggaagctgacctaagggagatgccatgggaaagcaggaacaggaacctgagtggagat
ggcttagtgggactcatgataaacagaatcaaccaggaagcaaaccctggagaaattgtt
gaaaaactgggagctgatgccaaaattctctctagtgcattacagaaaagcataaggcca
aaaactcttaatatcagatcttcctctttagagtctaagagagaaagcctggagaaagaa
tccagtgatgaagatgcagcctttgattgcagttttacagataaaacagagtcccctgtt
atctttgatctggaagacctggatgcagaacctgaaacacctacagcagtgaaaacttcc
agtgaaaaatctaaaaggttgcaaagaaagagcagctttccagtaaagccagttgagaaa
acagatgttgaaactggatttgacccattgtctctgctggttgctgagacagagcagcag
aaagaggaggaggaggaggatgatgacagaagcgtttctactccatctgcaagaagagat
ttagctgaagaaatagtcatgtacatgaacaacatgagcagccctttgtccagtcgtgcc
ccgagcattgagctgcaaaagcccttcgatgacagaaatgccagtaaaaggagcccaacc
attatccagccgtgtaggaggtccagccttcccccaaactccccaaggccacccagtctt
accaaatccaagagctaccactcaaaaaatgaagaaaggccaagggacaggctttggtct
tccccagcttattcccccaacagcccagccaaggagcagccccaggacacaaccagtgca
ttgacacttgtgtcatcaccatccttcaacttggacacgctgctgactcccaagtttgat
gttctgaaaagcagcatgttctctgctggaaaaggggttgcagagaaagcaagcaagtgg
tactccaaatttgcaatgtatgctgcatctgcaaaggatcaaaattcagaccgagcaagt
gtttcatctcttggagctctggactcagaatctacttctctcactgatgaagatgtctgc
aatgattttgaaagtgcttctcctcaggagaacaccacatcagaaattaagggaattagc
atcagcaagacaagcctggaaagctcagcttcccatgatagctcagctaagcaatttgac
cagtgtggttctctttccaagttccctttacctgacaaatcagagttggtgtcttcatgc
agcaccagcagtaccagtgtgttccagaactatgccatggaggtcctcatctcgagctgt
tctcgctgtcggacttgtgactgtttggttcacgatgaagaaatcatggcaggctggaca
gcagatgattcaaatctcaacaccacatgtcccttctgtggcaatttatttctgcctttt
ttaagcatagaaatccgagatcttcggcggcctggacggtattttctgaagtccagccct
tctacagaaaatatgcaggtcccatcccttttttccaatcagagtgggaggtcctgtaac
accacagctactgttggcctcactacatctgtgatgcctgtccaagaagatatcaattca
aatagcaaatctaagcagcatgacagtgtttatgccagaagtatccagatcccctcaggg
agaaggcaaaatgcctctgggtcagaatgtacaagtcaccctgtggcaaggagcatcagt
acatttggtcctttggaagaagatgagaaggaaaaccagatcagccatatcattcctact
ggtagcctgcctgctactttgcaaggaccaacagattccttgggcctggaatggcgcttg
cctagtcctgatcctataacggttccttacctcagtcctctcgtggtgtggaaagagctt
gaaagcttacttgaaaatgaaggggatcatgcaataacagtagcagactttgtagatcat
catcccattgtgttctggaacttggtgtggtatttcaggcgcttggacttgcccagcaac
ttaccaggattaatactttcttctgagcactgcaataagaactctaagattccacgaaac
tgtatgtcagaggacagtaaatatgtccttattcagatgctatgggacaacatgaaattg
catcaggatccgaggcagcctctgtatattctgtggaatgctcagagtcaaaatcgcact
cttttgtttgagacccagaagtacccaatggtccagttattgcaaaaagatgatgactcc
tttaaccaggagcttttgaggagtatggtgaaaagcattaagatgaatgatgtgtatgga
ccaatgagtcagatactggagaggctcaacaagtggccacatattaaaagacagaggagc
ctttacagagaaatactgtttctttcacttgttgctctgggaagagataacattgatata
gatgcttttgacagagagtacaaaatggcctatgatcgtctcaccgctaatcaagtgaag
aacactcacaactgcgatagaccacccagcactggagtgatggaatgcaggaagatcttt
ggagaaccatatctttaa
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integrated database retrieval system
