Ficedula albicollis (collared flycatcher): 101811031
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Entry
101811031 CDS
T02815
Symbol
LMO7
Name
(RefSeq) LIM domain 7
KO
K06084
F-box protein 20
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
101811031 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fab04121
]
101811031 (LMO7)
Ubiquitin system [BR:
fab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
101811031 (LMO7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
PDZ
PDZ_6
LIM
PDZ_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
101811031
NCBI-ProteinID:
XP_016155565
LinkDB
All DBs
Position
1:complement(52273891..52412533)
Genome browser
AA seq
1623 aa
AA seq
DB search
MHDSHKDDRSYRRISVIEPKPITDFNRFLPNKNKQTAYVPAPLRKRRTERNEDNRRSWAS
PVFTESDGTFSSGRETNPVASCQNSRAECGLTNPASLQIIYEYDSGSDSEEERRLPDLVL
DDLANRRFLVKKSPVSSAAPGHHFMLRNDSPKSCSRESYPAGPLAAMLEPLSNQRRQRQL
DTKEENKPRVNNPSQLSGCFDEDEEEVGIPNIEKDDLYFRKLNSSAPNTVVAFDKFLPKF
WTPEEELLWKKIKKSSFKPWYKEIQGFRKRSDSEDEEFAYKQSCTIVANQTRPSFDWNNS
CRRDQNYKPTAEYIGSSLSQIAEGKILESPDQPSQFSLLQALQKYTDYVSSEMETRIDPT
SGPRLIKCRKNVSFIPGGKQGDEENGYLYPDLENDDLFVRKTGAFHVNQVVLQDPRYLKK
LSEQEPPLEGEIILQPREGQTVIPDLEKDDMIFRKVLSQKKEVPLSGAPDKYHPALFPDP
WSLPEEIRSKFLCLLEKNAVPEERKSNGRVLSPSLHHKKDDMLTRKIESWKVGGNVQPVN
FIPGPCSEEDWKKWEAIREASKVRHKKRQMVERLFQKLSDEQGSKSLNDVNAEELQTMRK
IRYEELQKIKEQLQEQDLKWQEDLAKWKSRRKSYTSELQKKKEEREEIERRASEVSGRST
KSLKEMQQEREERDQDSYEQQKQEHNWTYSLNDDVFSEEKAPSTAAKDWSAGRDYRLEED
ASSSPRDSRSVYGTQAARESLLESSAAREAPAPPESLAQEREQSPALLSTRYSVNAQTGS
AQVSASLPRTYQKTDTSRLTSVVTPRPFGLHSRGISSLPRSFTMDDAQKYNGEVEKSKRT
QTLFTSMSFSQPDSAHSLSTGAFGSRGEEEEEEKGVQSAPPPSLALPLGSQDRDAGSSIP
KPEYGIPPDSLSLASSAEIASSTEPKDSKSMEQFSEMRISINQRPGHSRSFGFTTNWSSS
GAIVQTVEEGSPAALCQLHVDDEIIAVNGTKVSHMDYSQWEEALSRALETGNLVMDVRRY
GKNDWGKDLPSLPHVRHKILNLTSMGTNIIGTSENKWIDATSGEKVSHASTMSTLRDFSS
SLQSSDTETKLINGMQGDLGSNEQRASEPISLKNLKRRSQFFEQGGPEPAMPDLPVPSIS
APSRRVWDQEEERKRQEKWQKEQDRLLQEKYQREQEKLREEWLRAKQEAEKESSKYFDEE
QTVLTLNTTSITSQAPPVSSWRASPETNAPEEPERDGENELAGSLLQEEEERRRLQEERR
MQEEAARRLEREQQELELERQRKEREQQHAEEQRRQAEMEEQRRQERQRDASVEVPQYQR
HYERYEVSKTIEDRDGHPVIDRHYERYEVSKTIEEQPGQSFGDRSKSKSTTELNEFNRIR
NGTQSKYSERSWNMGESQKKSQKEQNLSAAELERQQILQEMRKKTSLHTDSSWIRQRSAS
IHKEPVSLYSSSMRRGESLDNLDSSGMRSWRHHSWLNQSASSSSLSSSQDFSRPVSTSNR
AYMCTPSSSKAPPVATSARAPSTSQTAPRAQSPLSASQPGSQTRSRSVSGKKICSYCNNI
LGKGAAMIIESLGLCYHLHCFKCVACGCDLGGSRSGAEVRIRNNQLFCNDCYIRFKTGQP
TSM
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atgcatgattcccataaagacgacaggtcttaccgtaggatttctgtgattgaaccaaaa
ccaatcactgacttcaaccgtttcttacccaacaaaaacaagcagacagcatatgtgcca
gcccctttaaggaagaggaggacagagaggaacgaggacaacaggaggagctgggcaagt
cctgttttcactgagtcagatggaacgttttcaagtggacgtgaaacgaatcctgtagct
tcctgccaaaatagcagagcagagtgtgggctcacaaatccagcttccctccagatcatc
tatgagtatgacagtggctctgattcagaagaggaaagaaggctacccgaccttgttttg
gatgacttagcaaatcgtagatttctagtcaaaaagagccctgtaagctctgctgcacct
ggacatcatttcatgttgcgcaatgactctcctaaatcttgctcgcgagaaagttatcca
gctggtccactagctgcaatgcttgaaccactgagtaaccagaggaggcagaggcagttg
gatactaaagaggaaaacaaaccaagagttaacaatccttcacaattatctgggtgtttt
gatgaggacgaggaagaagtaggcatcccaaacattgaaaaagatgatctttattttcgc
aagctaaattcttcagcgccaaatacagttgttgcttttgacaaatttcttcctaaattt
tggactccagaggaagaattgctatggaaaaaaatcaagaaatcctccttcaaaccctgg
tataaagagattcaagggttcagaaagagatcagattctgaagatgaggaatttgcttac
aaacaaagctgtaccattgttgctaatcaaacaagaccaagttttgactggaacaatagc
tgcagaagagatcagaattataagccaactgctgaatatataggaagctcattgtcacaa
attgcagaaggaaaaatcttggagtctcctgatcagcccagtcagttttcgttacttcag
gctctgcaaaaatacactgactacgtgtcttctgaaatggagaccagaattgatcctact
tctggccctaggctcataaaatgtagaaagaatgtttcctttataccaggaggcaagcaa
ggagatgaggaaaatggatatctatatccagatttggaaaacgatgatttgttcgttcgg
aaaactggggctttccatgtgaatcaagttgttcttcaagatccccggtatttaaagaaa
ttatctgagcaggagcctcctctagagggtgagataattctgcaacccagagagggccaa
actgtgattccagatttggaaaaggatgacatgatttttcgtaaagtcctctctcaaaaa
aaagaggtgcctttatcaggtgctcctgacaagtatcacccagcactgtttcctgatcca
tggagtcttccagaagagatccggtccaaatttctatgtttgcttgaaaaaaatgcggta
ccagaggaaaggaagagcaatggcagagtgctgtcaccatctttacaccataagaaggac
gatatgctgacccgcaagattgaatcttggaaagtgggaggcaatgtccagccagtaaat
tttatcccaggtccatgcagtgaagaagactggaagaagtgggaagcaatcagggaggcc
agcaaagttagacacaagaaacggcagatggtggagagactgtttcaaaagctttctgat
gagcaagggagtaaatctttgaatgatgtcaatgcagaggagctgcagacaatgcgcaaa
atccgttatgaagagctgcagaagataaaagaacagctacaagagcaagatctaaagtgg
caagaagatctagcaaaatggaagagtcgtagaaagagttacacttcagaattgcaaaag
aaaaaggaagagagagaagaaattgaaaggagagcctctgaggtgtctggaaggagtacc
aagtcactgaaagaaatgcagcaggagagggaggagagagatcaggactcctacgagcag
cagaaacaggagcacaactggacgtattcgctgaatgacgatgtgttcagtgaagaaaaa
gcaccttccacagcagcaaaggattggtcagcaggcagagattaccgtttggaggaagac
gcttcctccagccctagggacagcagaagtgtgtacggcacacaggcagccagggagagc
ctgctggagagctcggctgcccgcgaggctcctgccccgccggagagcctggcgcaggag
cgggagcagagcccggctctgctgtccactcgctactcagtgaatgctcaaactgggtca
gctcaggtttcagcttctctcccgagaacttaccagaaaactgatacctccaggttaaca
tctgtggttacaccaagaccttttggtctccactcaagaggaatctcgtcacttccacgg
tcgttcacgatggatgatgctcagaaatacaatggagaagtagaaaaaagtaaaagaact
caaactttgtttaccagcatgtccttttcacaaccagactctgcacactctctctccact
ggtgcatttggaagcagaggtgaggaggaagaggaggaaaaaggtgttcagtcagcacct
cctcctagtttggcattacctttagggtcccaagaccgagatgctggaagcagtattcct
aagccagagtatggcatccctcctgattctctttcacttgcatcttccgcagaaattgcg
agttcgacagagcctaaggattcaaagtccatggaacagttcagtgaaatgagaatcagt
ataaaccagagacctggccacagtcgcagctttgggtttacaacaaattggagttcttca
ggagccattgtacagacagttgaagaaggcagccctgcagcactctgtcagctgcatgta
gatgatgagatcatcgctgtcaacggcaccaaggtttcacatatggactacagtcagtgg
gaagaggccctcagcagagcactggaaactggaaacctggtcatggatgtcagacgatat
ggaaagaatgattggggcaaagacctgccttccctgccacatgtaaggcataaaatcctc
aatctcaccagtatgggtaccaacattataggtacatctgaaaataaatggattgatgca
acttcaggagaaaaagtttcacatgcttccaccatgtccacactaagagatttctccagc
agccttcagagttctgatacagaaacaaaattgataaatggaatgcaaggagatcttggc
tctaatgaacaaagagcatctgaacctatatctttgaaaaacttaaaaagacggtcacaa
ttttttgaacaaggaggcccagagcccgcaatgcctgatctcccagtcccatccatcagc
gctcctagtcgtcgggtttgggatcaagaggaagagagaaagcgacaggagaaatggcaa
aaagagcaggaccgtttgttgcaggagaaatatcaacgagaacaagagaaactgagggaa
gaatggctacgagctaaacaagaagcagaaaaagagagctccaagtattttgatgaggag
cagaccgttctaaccctaaatacaacatccatcacttctcaggctccacctgtgtccagc
tggagagcaagccctgagacaaatgctcctgaggagccggagcgagatggagaaaacgag
ctggcagggagcttgctgcaggaggaggaagagaggaggaggcttcaggaggagcggagg
atgcaggaagaagcagccaggcgtttggagcgagagcagcaggagctggagctggagcgg
cagcggaaggagagggagcagcagcacgctgaggagcagaggcggcaggcggagatggag
gagcagaggcggcaggaaaggcagagggacgcctcggtggaggtgcctcagtaccaaaga
cattacgagcgctatgaagtatctaaaacaatagaggatcgagatggccatcctgtcatt
gacaggcattatgagcgttatgaagtttctaaaaccattgaggaacaacctggtcagtca
tttggtgacaggagtaagtcaaagtcaactacagaactgaatgaattcaacagaatcaga
aatggtacccagagcaagtattcagagaggtcctggaacatgggtgagtcccagaagaag
tctcagaaggagcaaaacctgtctgcagcagagttggagagacagcaaatccttcaggaa
atgagaaagaaaacatctctacacacggacagcagctggattaggcagcgcagtgccagt
atacataaggagcccgtcagtctgtacagcagtagtatgaggagaggggagtctctggac
aaccttgattcttcaggaatgaggtcatggaggcaccactcatggctgaaccagtctgca
tcctcttcatctctatcttctagtcaagattttagtcgcccagtgtccacttccaaccga
gcttacatgtgtactccttcctccagcaaagcacctcctgtggccacgtctgccagagcc
ccctccacatcccagacagctccccgggctcagtctcctctctctgcgtcccagccaggg
tcccagacacgcagcaggtcagtcagtgggaagaaaatctgttcatactgtaataacatt
ctgggcaaaggagcagccatgatcattgagtctcttggtctttgttatcatttacattgc
tttaagtgtgttgcctgtggatgcgaccttggtggatcccgctctggagctgaagtcagg
atccgaaacaaccaactcttctgcaacgactgctatatcagatttaaaactggacaacca
acctccatgtga
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integrated database retrieval system
