Ficedula albicollis (collared flycatcher): 101811185
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Entry
101811185 CDS
T02815
Name
(RefSeq) neural-cadherin-like
KO
K27892
neural-cadherin
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
fab04515
]
101811185
Cell adhesion molecules [BR:
fab04515
]
Cadherins
Cadherin related
101811185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Ig_Shg
CADH_Y-type_LIR
Cadherin_CELSR2_9th
EGF
Cadherin_pro
hEGF
Fibulin_C
Cadherin_4
Y_Y_Y
EGF_2
Laminin_G_3
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
101811185
NCBI-ProteinID:
XP_016151605
LinkDB
All DBs
Position
2:133635924..133680859
Genome browser
AA seq
2549 aa
AA seq
DB search
MMMKAEMKGFLYETCTHLDDDWYLCQVTLVAPEEELLSWAMHPFPFLARVNPDARKGTLV
YQLVARSSSHGNTSAGITYTLLAGGEERFRVDEDTGIIMTTGLPLTWNKEYVVTVEASDE
NGNKSPYASVSILAGSRPPQFTNMSYSVFVPENTPAGERVAVVEAVSFQSQPLSYSLLTN
PSGLFRVRQESGELSLTHPVDYESEHHLYQLLLRAMEAESTLSTVTEVMVHITDENDCSP
EFQRSIYSRDNVPETIPVGTSLLQVLATDCDSGSNAEISYFIQSTDFSITRHGVVNSNQR
LNFERANHMYEFVVIAVDKGHPPRTGTASVRIRVANVNDEAPVFSQPVYRTFLSEDAGPG
TLVATVRAEDPDGDGLLYLITGGNEEGNFELDSQKGIIKLRRNPPPSLKGPQYTLNVTAI
DDNASGGPTPLSSFAEVIVGVNDINNNKPVFRECAYYSDSTWVLENQPPGTHVLQVEAYD
ADLGINGEVKYGLMHRDGASLGFSIDPDTGAISTTRSFDREEQREHTLCVTATDQAREPL
IGVCQLTVLIADLNDNDPTFENSRYQYFLSEDTPVGMSFLRVAAHDSDQGVNAAVTYSML
EHQLEYFQINPSTGWVYVNCPLPQPMRISRYIVATDGGNRSSTVELTVTVTSALSQPPRW
EQGTYWVTIPENTIRDTSIVTIKATSPLGDPRVTYNLEEGQVPETNMPVRFYLKPNRADG
SASLLVAEPLDFETTKFFTLTVRAQNVAMTPLASFATVCVNITDVNDNVPFFMSSNYEVS
VPEGADVGTSVVQVLAMDLDSGLHGEIHYLILKDANEDYQFFTIEPETGIISTQASFDRE
KRASYLIEVQSRDLSESARPGVHGQPNTDTAYVRVFVSDVNDNAPAFPRSVYEVSVDEDR
DVGTPVVTATANDQDEGANAKLRYQITSGNVKGVFDVEPEIGTVFIAQPLDYEQEQHYEL
RLVASDGKWENHTLIIINVVNKNDEAPVFTQNEYQGSVLEELTDLPVLVLKVSATDPDQA
ADQNAINYSLHGQGASSEFSINESTGEISAHKRLDREKRSTWRFLVLATDEGGEGLTGFA
DVIIEVGDVNDNAPLFLCVSDGCFTGRIPEDSPADTPVMEMTAVDLDDPKAGINAVLTYS
IIQNVKNEINLNLFSIDPVSGTISTVLGALDREKEDKYLVVVEARDGGGLTGTGTATILV
TDVNDHAPVFLQGIYTAFVSENASINTEVVVVSAVDRDEGENAMVTFSIVDGDNDRKFSI
ETDEVNNCGFIRLRKQIDFEKPHERVFNLTVKAEDMDFFSIAHCVIYVEDANDHAPVFYP
QFYEVAALGEDVPIGTKVIQVSAVDLDSGLNGRFFFHLLNKSDPSGQFSLDSDGWLMVAG
LLDHETVAQYQLTVIATDMGQPPLTGSATVLVTLQDVNDNGPEFEAHYNPVVWENTASPQ
VVQMNETCRLLYAKDRDTAANGAPFSFRLLGDLDSLTSFSLQDFHNGSAMLTALRTFDRE
VHKAFYLPILITDSGMPPMSSTNTLTVNIGDQNDHPHSAGYMECLIYSYDGILPTTVLGQ
VSAPDADDWDRKIYQFEGKASRYFILNDNSGLLTIKEGTPPGTYNIRVRVIDGVWPDVIS
TVKVIVKEIKDDALQNAGSVRIKGITPEQFISQSPEKQSKYYQMKKLLSEILSVQLENVH
IFSVLNSPSPIRGVDVWFAVYGPPYYKAEKLNGNVAASRAWLESVLHINITQAGIDECVT
ADCTHSSGCISKHEQTHVPTITTAGSVSLVSVTVLSQAVCGCAARENPHLSCSSYQTNPC
LNGGTCVDTVLGYRCKCAANFHGPDCQQTKHSFRGHGYAWFPPLQPCFESRISLEFITEV
VDGLLLYHGPAAQGQPGEREHFLALELSGGVPSLTVSHSSGELFLQLSQKVNVADRRWHY
IKIINDGKEVKLILDNCMNVSVRDNGNVTKKVSQMDLSVCEASGEIVGSQSLGKLFSGHQ
PLQLGGVKKTLPYHSSQRHFRGFVGCIRNVIVDSKVYDLEHPAESLNSAPGCVLMDEMCQ
SGGVASCGTHGKCVGGWDFFRCDCSPGYAGLACEKVLPEWAFGRDSWIHFEPRSILSPRS
TRIQLMVRTRLSHSTLLSLASAGGNGHIQLQVVEGFFSVNFSLGDKNHSLRMKTLRINNG
QWVLLTMERYNNEFTLRVNSGGGDQEVTSVLGVNRWFEMDWASIVLGNHLPSHSESDFQG
CMRDVQLDGHPLLVEGTSTEFGLILRRQGVTMGCHSSACSSQPCYSPFLCVDLWRKYECR
CPAGKVEVTDTLTGLRHCTSSPCGHWTCRNGGTCVAQSQDKTICQCPEGYKGRWCEISQV
KAGRPVGLSSGSILAISMCLLVFLALLVSYTVWSQWGSSGFRKGGIYHIPEERESWEDVR
ENVFNYNEEGGGERDQNAYDIDELKKPLHKIPRSSSRAAAPHSRTQTGPKRDSIPKHAHQ
KQSISAATSIPDFKEYVSQIIRDADNDLKSLPADTIHFYCLEGQCSLAGSLSSLDSISGD
EDLNYDCLQDWGSKFEKLKELYVVSDENL
NT seq
7650 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgaaggcagagatgaaaggtttcctgtatgagacatgcacacatctggatgat
gactggtacctgtgccaggtgacactggtggccccagaggaggagctgctgtcctgggcc
atgcacccgttcccgttcctggcgcgcgtcaaccccgatgcacgcaagggcactctcgtc
taccagctggtggcacgctccagcagccatggaaacacctctgctggcataacttacaca
ctccttgcaggtggtgaggagcgattccgggtggatgaggacactggcatcatcatgacc
actggcttgcccttgacgtggaacaaggagtatgtggttactgtggaagcctctgatgag
aacggcaacaagagcccctacgcctccgtttccatcctggcaggctcccgacctcctcag
ttcaccaacatgtcctacagcgtgtttgtccctgaaaacactccagcaggagaaagagta
gcagttgttgaggctgtttctttccagagccagcctctttcctacagtctcctgacgaac
ccgtccgggctgttccgggtgaggcaggagagtggggagctcagcctgacccaccccgtg
gactacgagagcgagcaccacctctaccagctgctgctgagagccatggaagctgagagc
accctcagcactgtgactgaggtcatggtccatatcactgatgaaaacgactgttctccc
gaattccagcgctccatctacagcagagacaacgttcccgaaaccattcctgttgggacg
tcccttctgcaagtgcttgcgacagactgcgactctggctccaacgctgagatctcttac
ttcatccagagcactgatttttccatcacacgtcacggggtcgtcaattctaaccagagg
ctgaactttgagcgggcaaaccacatgtacgagtttgtggtgatagctgtggacaaagga
catccccctcggacggggacggcgtccgtgcgcatccgagtggccaacgtcaacgacgag
gctcctgtcttctcccagcccgtttacaggactttcctttcggaggatgctggtcccggc
accttggtggctactgttcgggcagaggaccctgatggagatgggctcctttatctgatt
acaggaggcaatgaggagggcaactttgagctggatagccagaaaggtatcattaaactc
cgcagaaacccaccacccagtctgaaagggccacagtacaccctgaatgtcactgccata
gatgacaatgcctcggggggacccactcctctcagcagttttgctgaggttattgtagga
gttaatgacattaataacaacaagcctgtctttagagagtgcgcttactacagtgacagc
acctgggttctggagaatcagcctccaggcacgcacgtgctgcaggtggaagcctatgat
gcagaccttggcatcaatggagaagtgaaatatgggctcatgcaccgagacggagcttcc
ctgggcttcagcattgaccccgacacaggagccatcagcaccacgcgcagtttcgaccgg
gaggagcagcgggagcacactctgtgtgtcactgccacggaccaggcgcgggagccgctg
atcggcgtgtgccagctcaccgtgctcatcgccgacctcaacgacaacgaccccaccttt
gagaacagccgctaccagtacttccttagcgaagacactccagtgggaatgagtttcctc
cgagttgcagctcacgacagtgaccagggtgtgaatgctgctgtcacatactcgatgtta
gagcatcagctagaatacttccagatcaaccccagcacaggctgggtgtatgtgaattgc
ccgctaccccagccgatgcgcattagccgctatattgtagcgacagacggggggaacagg
agcagcacggtggagctgacggtgacggtcaccagcgcactgagccagccaccccgctgg
gagcagggcacatactgggtaaccatccccgaaaacaccattcgtgacaccagcattgtg
accatcaaagccacatcccctcttggtgatcccagggttacgtataatctggaggagggt
caagttccagagactaacatgccagttcgtttctatctgaagccaaacagagctgatgga
tctgcttctcttctagtcgctgagccacttgactttgagacaactaagtttttcaccctg
acagtccgggcacaaaatgtagcaatgactcctttagcttcctttgccactgtttgtgtg
aatataacagatgtcaatgataatgttccattcttcatgtcctcaaactacgaggtgtct
gtgccagaaggagctgatgttggcacgtccgtggttcaggtgttagctatggacttggac
tctggcctgcatggagagattcactacctaatattaaaagatgctaatgaggattatcag
ttcttcaccattgaacctgagacaggaattatttccacccaggcatcttttgacagggag
aaaagagcctcttacttgattgaagttcagtctcgggacttatcagaatctgctagacct
ggtgttcacgggcagcccaacacagacacagcctacgtgagggtttttgtcagcgatgtg
aatgacaacgctccggcatttcctcggtcggtgtacgaggtcagcgtagatgaggacagg
gatgttggaactcctgttgtgacagcaacagcaaatgatcaagatgagggtgcaaatgcc
aaactaaggtatcagatcacttcaggaaatgtgaaaggggtttttgatgtggaacctgag
attggaactgtcttcattgctcagcctctggattatgaacaagaacaacattatgagctt
cggcttgtagcttctgatggaaaatgggaaaaccacactcttatcatcatcaatgttgtc
aataagaatgatgaagcacccgtcttcactcagaatgaataccagggcagtgtcttggag
gagctcacagatctgcccgtacttgtcctaaaggtttctgcgacggatcccgaccaggca
gcagatcaaaatgccattaactattccctgcatggacagggagccagcagcgaattcagc
atcaatgagagcacaggtgagatcagcgcacacaaaaggctggaccgagagaagcgatct
acgtggcgcttcctcgttcttgcaacggatgagggcggagagggactgactggctttgca
gatgtcatcatagaagtgggggacgtgaacgacaacgcgccccttttcctctgcgtgtcc
gatggctgtttcacgggccgcatccctgaggactctccggctgacactcctgtcatggaa
atgacagcagtggacctcgatgaccccaaggctggtataaatgctgtgctgacatacagt
atcattcagaatgtcaaaaacgaaattaatttgaacttgttctcaattgatccagtcagt
ggcaccatctctacggtgctcggggccctggaccgcgagaaggaagacaagtacctagtg
gtggttgaggccagagatggaggagggctcactgggacaggcaccgccactattttggtg
acagatgtaaatgatcatgctccagtcttcctgcaagggatttacacagcatttgtctct
gagaatgcgagtattaacactgaggtggtggtggtgtctgctgtggacagagatgaggga
gaaaacgccatggtgacattcagcattgttgatggggacaatgaccgcaagttctccata
gagacagatgaagtcaacaactgtgggtttatccgactacgcaaacagattgactttgag
aagccccatgagagggtgttcaatttgactgtgaaagcagaggacatggatttcttcagc
attgctcactgtgtgatctatgtggaggacgcgaatgatcatgctcctgtcttctatccc
cagttctatgaagtggctgcacttggggaagatgtaccaattggtaccaaagttattcag
gtttctgctgtggacttggattctggcctgaatgggaggttttttttccacctgctaaac
aagtctgatcccagtggccagttctctttggacagtgatgggtggctgatggttgcagga
ttgctggatcatgagacagtggctcagtaccaactcactgtgattgccactgatatggga
cagccccctctgactggcagtgccaccgttttagtgaccctgcaggatgtaaatgacaat
gggccagaattcgaggcccattataacccagtggtctgggaaaacacagcttctccacag
gttgtccaaatgaacgagacgtgcaggctgctgtacgccaaggaccgagacactgctgcg
aacggagcgcctttctcctttcgccttctcggggatctcgacagcctgaccagcttcagc
ctgcaggacttccacaatggcagtgccatgctgactgcactgcgtacctttgacagggag
gtgcacaaggccttctacctgcccatcctgatcacagacagcgggatgccccccatgagc
tccaccaacaccctgaccgtgaacatcggggaccagaatgaccacccgcattctgctggc
tacatggaatgcctcatttacagctatgatggtattctccccacgactgtactgggccag
gtcagtgcccctgatgctgatgactgggatcgcaaaatctaccaatttgaagggaaagca
tcaaggtactttatccttaatgataactcaggtttgctgactattaaagaaggaacccca
ccgggaacatacaacataagagttagagtcattgatggagtctggccagatgttatctcc
actgtaaaggttatagtgaaggaaatcaaagatgatgccctccaaaatgctggttctgta
cgaataaaaggtatcacaccagagcagttcatatcccagtcccctgaaaagcaaagtaaa
tactaccagatgaagaagctgctttcagaaattctctcagttcaactggaaaatgttcac
attttcagtgtactgaatagcccaagtccaatccgaggggttgatgtttggtttgcagtt
tatggtccaccttattataaagcagaaaaacttaatggcaatgtagcagcttccagagcc
tggctggaaagcgttctgcacataaatatcacccaggctggcattgatgaatgtgtgact
gcagactgcactcacagcagtggatgcatcagtaagcatgagcagacccatgtaccaacc
ataaccacagctggaagcgtttccctggtgtctgtgacagtcctgagccaggctgtgtgt
ggctgtgctgctcgggagaatcctcatctttcctgctcctcgtaccagacaaacccttgt
ctcaacggtggcacatgtgtggatactgtcttgggctacagatgcaaatgtgctgccaat
tttcacggaccagactgccagcagacaaaacacagcttcagaggccacggttatgcctgg
ttccctcccctccagccttgctttgagagccgcatctccctagagtttatcactgaggtt
gtggatggccttctgttgtaccatggaccagcagcacaggggcagcctggggaacgggaa
catttccttgctttagaactctctggtggtgtcccgtcgctgaccgtgagccacagctct
ggtgagcttttcctgcagctgtcacaaaaagttaatgttgcagatcgccgctggcactat
attaaaattataaatgatggaaaggaagtgaagctgattcttgacaactgcatgaatgtc
tcagttagagacaatggcaatgtcactaagaaggtttcccaaatggatctctctgtctgt
gaagcctctggagagattgtgggatctcaaagcctgggtaagctcttcagtggccatcag
cccctgcagctgggtggagttaagaagaccttgccttaccacagctcacaaaggcacttc
agagggtttgtgggctgcatacgcaacgtcatcgttgatagtaaggtctatgatttagag
caccctgcagagtccctgaacagtgctcctggctgtgtccttatggatgaaatgtgtcag
agtggcggggtggcctcctgtggcacccatggcaagtgtgttggtggctgggatttcttt
cgctgtgactgctccccaggatatgctggattagcatgtgaaaaagttcttccagaatgg
gcttttggaagggacagctggatccatttcgagcccaggagcatcctcagcccccggagc
actcggatccagctgatggtgcgcacgcggctgtcccacagcaccctgctcagcctggcc
tctgcaggtggcaacgggcacatccaactgcaggtggttgagggtttctttagtgttaac
ttcagtttgggggacaaaaatcactctttgagaatgaaaacattacgtataaacaatggc
cagtgggttcttctgaccatggagcgctacaacaatgaatttaccctgcgtgttaacagt
ggtggaggtgatcaagaagtcacctctgtcttgggtgtgaatagatggtttgaaatggat
tgggcaagcatcgtgctgggaaaccaccttcccagtcattcagagagtgatttccaaggt
tgtatgcgtgatgtccagctggatggtcacccactcctcgtggaaggcacaagcacagag
tttgggttaattttgaggcggcaaggggtcaccatgggatgccattccagtgcctgcagc
agccagccctgttacagccccttcctttgtgtagacctttggagaaaatatgaatgccgg
tgcccagctgggaaagtagaagtgactgacacccttacagggctcagacactgtacttca
tccccttgtggacactggacctgtaggaatgggggtacctgtgtggctcaatcccaagac
aagactatctgccagtgccctgaaggttacaagggaagatggtgtgaaattagccaggtg
aaggctggaagacctgttggactaagctctggctctattctggcaatcagcatgtgcctc
cttgtcttcctagcacttttggtttcctacacagtgtggagtcagtggggaagctcaggg
tttcggaaaggaggaatttaccacattcctgaagagcgtgaaagctgggaggatgttaga
gaaaatgtcttcaattataatgaagaaggaggtggagagcgtgaccagaatgcttatgat
atagatgaactgaagaaacctctccataaaattccccgctcctcctcacgagcagctgct
ccacactccaggacacaaactggcccaaaaagagactcaatcccaaaacatgcacatcaa
aagcaatcgatatcagctgccaccagcatcccagacttcaaggaatatgtttctcaaatc
atacgggatgcagacaatgatctaaagagtctgccagctgacactattcatttttactgc
ttggaagggcaatgctctctagcagggagccttagctcattagattccatcagtggggat
gaagatctaaattatgactgcctacaagactgggggtcaaagtttgagaagcttaaagaa
ctctatgtggtctcagatgaaaatttgtaa
DBGET
integrated database retrieval system
