Ficedula albicollis (collared flycatcher): 101811259
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Entry
101811259 CDS
T02815
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04110
Cell cycle
fab04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101811259 (SMC3)
04114 Oocyte meiosis
101811259 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fab03036
]
101811259 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
fab00535
]
101811259 (SMC3)
Chromosome and associated proteins [BR:
fab03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
101811259 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
101811259 (SMC3)
Proteoglycans [BR:
fab00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
101811259 (SMC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
101811259
NCBI-ProteinID:
XP_005048850
UniProt:
U3JHZ0
LinkDB
All DBs
Position
6:26871818..26899137
Genome browser
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEEIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYSKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVLNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTLARSDDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSTESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAEHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagcaggtaatcattcagggctttcgaagctacagggaccaaaccattgtg
gacccattcagctccaaacacaatgtcattgtgggaagaaatggatctggaaaaagcaac
ttcttttatgcaattcagtttgtcctcagtgatgagtttagtcatcttcgcccagagcag
agactggctttgttgcatgaaggtaccggtcctcgtgttatttcggcatttgtggagatt
atatttgacaattctgacaacaggttaccgatcgataaagaggaagtctcgcttcgcaga
gtcattggagccaagaaggaccaatatttcttagacaagaaaatggtgacgaaaaatgat
gtcatgaatctgcttgaaagtgctggattttctcgcagtaatccctactatattgtcaaa
caaggaaagatcaaccagatggccacagctcctgactctcaaagattgaagttactaaga
gaagtagctggtaccagagtgtatgatgaacgtaaagaggagagtatttcactaatgaaa
gaaacagaggggaagcgagagaagatcaacgagttgttgaaatacattgaagagcgactg
catactctggaagaggagaaagaagagctggcacagtaccagaaatgggataaaatgagg
agagcattagaatacaccatttataaccaggaacttaatgaaacccgagctaagcttgat
gagctttctgctaaacgagagacaagtggagagaagtcgaggcagctgagagatgcacag
caagatgctagagataaaatggaggaaatagaacggcaagttcgagaactgaagacaaag
atttctgcaatgaaagaagagaaagagcagcttagtgctgaaagacaggagcagattaaa
cagaggactaaattggagctgaaggctaaagatctacaggatgaattagctggcaacagt
gagcaaaggaaaagactgcttaaagagaggcaaaaacttcttgagaaaatcgaggagaag
cagaaagaattggcagaaacagagccaaaatttaacagtgtaaaagaaaaagaagagaga
ggaattgctagacttgcacaggctacacaagaaagaacagatctttatgcaaagcaaggt
cgagggagccagtttacttccaaagaggaaagggataagtggataaagaaagaactgaag
tctttagatcaagccatcaatgacaagaagcggcagattgcagctatacacaaggattta
gaggatacggaggcaaacaaggagaaaaacttggaacagtacagtaaactggaccaggat
cttaatgaagtgaaggctcgtgttgaagaattggacagaaaatactatgaagtgaaaaat
aaaaaggatgagctacagagtgaaagaaattatctatggagagaagagaatgcagaacaa
caagctcttgcagcaaagagggaggatctagaaaagaaacagcagcttctcagagcagca
acaggaaaggccattttgaatggtatagacagcataaacaaagttttggagcacttccgt
cgaaaaggcataaatcagcatgttctaaatggctatcatggaattgtgatgaataacttt
gaatgtgaaccagcattctacacctgtgttgaagtcactgcagggaacaggttgttttat
cacattgtggattctgatgaggtcagtacaaagatcctaatggaatttaacaaaatgaac
cttcctggagaagttactttcctgcctctgaacaagctggatgttagagacactgcttat
cctgagactaatgatgctattcctatgatcagtaaactgaggtacaatccaagatttgat
aaagctttcaaacatgttttcgggaagactttaatttgtcgtagcatggaagtgtctacc
cagctggccagagctttcacaatggattgtatcactctggaaggtgatcaagtcagccac
cgaggtgctctgactggaggttattatgacaccaggaagtctcggcttgaattgcaaaaa
gatgttagaaaagcagaagaagaacttggtgaactcgaagcaaagctcaatgaaaactta
cgtagaaacattgaaaggattaataatgagattgaccagctaatgaaccaaatgcagcaa
attgaaacacagcagagaaagttcaaagcctctcgagacagtattttgtcagagatgaaa
atgctgaaggagaaaaggcagcagtctgaaaagacatttatgcctaagcaacgtagcttg
cagagcctggaggcaagtttacatgctatggagtcaactagagaatcattaaaagcagaa
ctggggacagatttgttgtctcagctcagtcttgaagatcagaaacgtgtggatgctctt
aatgatgaaattcgacaactacagcaagaaaacagacagcttttgaatgagaggattaaa
ttggaaggcattatcacaagagttgaaacatacctcaatgagaatctgagaaaacgctta
gaccaagtggagcaagaactgaacgagcttcgagaaacagaaggtggcacagttcttact
gccacaacatcagaacttgaggctatcaacaaacgagtgaaggatacactggcacggtca
gatgatctggataactctattgacaaaacagaagcaggaattaaagaacttcagaaaagc
atggaacgctggaagaacatggaaaaggagcatatggatgccattaatcatgatacaaaa
gaacttgaaaaaatgacaaacaggcaagggatgctcctcaagaagaaagaggagtgcatg
aagaaaatacgagagttgggttcgcttccacaggaggcttttgaaaagtatcagacttta
agtttaaagcagttattccgcaagctggagcagtgcaatactgaactgaagaaatacagt
catgttaataaaaaagctttagatcagtttgtgaatttctcagagcagaaggaaaaattg
ataaaaagacaagaggaactggacaggggctacaaatctatcatggagctgatgaatgtc
cttgagctcaggaaatatgaggctattcagctgactttcaaacaggtgtcaaaaaatttc
agtgaagtatttcaaaagttagtgcctggtggcaaggccacattagtgatgaagaaagga
gatgtggagggtagtcagtcccaggatgaaggtgaaggcagcaccgagagtgaaagggga
tctggatctcagagcagtgttccatctgtggatcagttcactggagttggcataagggta
tcgttcacagggaagcagggtgaaatgagagaaatgcagcaactttcaggtggacagaag
tctttagtggccctggccctaatatttgccatccagaaatgtgatccagctccattttat
ttgtttgatgaaatcgaccaggccttggatgcccagcacagaaaagctgtgtcagatatg
attatggaactagctgaacatgctcagtttattacaacaacttttaggccagaactgctt
gagtcagctgacaagttctatggtgtaaaattcagaaacaaggtcagtcatattgatgtg
atcacagcagaaatggccaaagacttcgtagaagatgacaccacacatggttaa
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integrated database retrieval system
