Ficedula albicollis (collared flycatcher): 101811275
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Entry
101811275 CDS
T02815
Symbol
SH3TC2
Name
(RefSeq) SH3 domain and tetratricopeptide repeats 2
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fab04131
]
101811275 (SH3TC2)
Membrane trafficking [BR:
fab04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
101811275 (SH3TC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_2
TPR_12
SH3_1
SNAP
SH3_9
TPR_1
TPR_2
Motif
Other DBs
NCBI-GeneID:
101811275
NCBI-ProteinID:
XP_016157206
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All DBs
Position
13:1383047..1407222
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AA seq
1362 aa
AA seq
DB search
MPVVLPAAPMVPREKERAGRSSRIRGSPGWRMLDGPQLDIPTGEECESCWPRSPELPPRW
QRGQWRWDTSTAPGSQHQGMAPGMHLQGMASGKAEQSSPTPEAGHGSPDPSVALLALRDT
FPPEISLSFSVESRSSRGRNSQLQEAARKKLWALESDDRSVCALFKELSARLVCMQAHED
RFLLTFKTLEEVWKFSTYLTLGYVGSCLEQLLFAQEFWLDCALVEDTELRVTMDEEHLAT
IYMDLLLQEGNFFSRAVPGAWKSEQEEEEGLQLCRNELIHVKSAGQDSRWEGMSLLTGQR
GLVPLTALEPIAQPFYQWFLKNYAVSFGLSQEISGTSSQAIGKGRCIATKEHRGAAWDEL
SFSKGDPIEIIGFFIPGLPWFVGKSLSTGSIGFVPTQHVNPEACEPLGKGFVFLSEEEKS
PVLQVPCNGDEQHFVTLLGDLAHTDITSVYRLAGFEPTAAFPQAPPEAAFHGSKEIQVLQ
SWEEISDWAASSTSELSSPGSETAPATLEDVLLDKLDDLDYPKFFIDLNAGHMEDADVFD
PMLTFLNQDSFVPSFQSFYDLSFSFLHSTFYGFSDEDELVLYLETSRNWAKRTHSVWAHV
RLCFLLGKLCIKKVKLSQARVYFEEAMSVLDRGFGDLPLLAALHVSLASIYLKQNMKHKF
SSLLGKTVTLLVCLPGRSFSWENELELLTYVLRESIAAGNALLEARTCFLIVRLLLQLGR
TEEVLPFLEHLQCLSSTWLSPGSRAGPLDAAATLGYLYDKKCLPNVALACVRAFAPSSTK
GTPTPIWKAGFILQNASKLVGKQLDGSSIPAVACLYLKRALQFCCHSRAVPAQRTLCAVL
SRLLLQHGRLDGALCDAARAAGLARLLGEEEAFESSLSLGWLHLLQQQPGPAGAVLRRCL
RGTAGESQAGAVHNLLAMALGGQGRLQEAAENFLRALHKAKETGSGRNQAVALANLGQLS
LSCGAAQLAELYLLWAVRLFAPLQGHRQLDTELAQVLLWLAQAMVDRQRMEDAKLCYELA
LGFALRWQNLRSQLHVTERLCHFYSRVCPELQACIAYHEHWASLARQLQDRELEGNARQA
LSQLYQALGTPQALRQSLDCTKQCLRIFIDLEEAARAAEAWLQAGKLYYLLQEDELVEMY
FQAGIQTALRGDNFSLAMDLYEKAGDTFFNGSRNRARAVEFYRGGAVPLARKLKATQTEL
RLFNKLAELQISLQGYEKALEFATLAARLSLRVGDQLQELVAFHRLATAYELLHMYEMAE
DCYLKTLALRPPVLQSSAEALYYCKLYWHLGNLTLHKLKDEQDASSYFLLALAAAAELGD
QELQAQLCAKLAAVPRAPGAPEGTAGCATERPRWLSEGGHVV
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtggtgctgccagctgcccccatggtgccaagggaaaaggagcgggcagggagg
agctccaggatcagaggcagccctggatggaggatgctggatgggccccagctggacatc
cccacaggtgaggagtgtgagtcctgctggccccgctcccccgagctcccgccccgctgg
cagcggggacaatggcggtgggacacgagcacggcaccagggagccagcaccagggaatg
gcaccagggatgcatcttcagggaatggcatcagggaaggcagagcagagcagccccact
cccgaggcaggacacggctccccagacccctctgtggcgctgctggctctcagggacacc
tttccaccagagatctcgctctccttctccgtcgagagccgctcctcgcggggccgcaat
tcccagctccaggaagctgccaggaagaagctgtgggctctggagagcgatgacagaagt
gtgtgtgccctgttcaaggagctgtcagccaggctggtctgcatgcaggcacacgaggat
cgcttcctcctcaccttcaaaaccctggaggaagtctggaagttttccacgtatctgact
ttaggatacgtggggtcctgcctggagcagctgctctttgcccaggagttctggctggac
tgtgccctggtggaggacaccgagctcagggtcaccatggatgaagagcacctggccacc
atctacatggatctgctcctccaggaagggaattttttctccagggcagtgcctggtgcc
tggaaatcagagcaggaggaagaggagggtctgcagctctgcaggaatgagctgatccat
gtgaagagtgctggacaggattccagatgggaaggcatgtccctgctgacgggacagcga
ggcttggtgcccctgacagctctggagccaatagctcagcccttctaccagtggttcctg
aagaattatgctgtgagctttgggctctcccaggagatcagcgggacgagctctcaggcc
attggcaaaggcaggtgcattgccaccaaggagcacagaggagcagcgtgggatgagctg
agcttctccaaaggagaccccatagaaatcatcggcttcttcatccctgggctgccctgg
tttgtgggcaaatccctcagcactgggagcattggctttgttcccacccagcacgtaaat
cccgaggcttgtgaacctctgggaaagggttttgtgtttctgagtgaagaggagaagtcc
ccagtcctgcaggtgccctgcaatggtgacgagcagcactttgtcaccctgctgggggac
ctggcacacacggacatcacctctgtgtacaggctggctggttttgaacccacagctgca
ttcccacaagcgccaccagaggctgctttccacggcagtaaagaaatccaggtgctccag
tcttgggaggaaatcagtgactgggctgccagcagcacctcggagctgtccagcccaggc
agtgagacagcccctgccacgctggaagatgttctcctggacaagctggacgatttggat
tatcccaaattcttcatcgacctcaacgctggacacatggaggatgctgatgtctttgac
cccatgttgaccttcctcaaccaagacagtttcgtgcccagttttcaaagcttttatgat
ctcagcttttcctttctccactccactttttatggtttctctgacgaggatgagctggtc
ctgtacctcgagacttcccggaactgggccaagaggactcactcagtttgggctcacgtc
aggctctgtttcctcttgggtaaactctgcatcaaaaaggtcaagctctcccaggcccgg
gtgtactttgaggaagccatgagtgtcctggacaggggttttggggacctgcccctgctg
gcagcgctgcacgtcagcctcgcctccatctacctgaagcagaacatgaagcacaagttc
tcctccctgctggggaagacagtgaccctgctggtgtgcctgcctggccgctccttcagc
tgggagaacgagctggagctgctgacctacgtgctgagggaatccatcgctgcgggcaat
gccctgctggaggcccggacctgcttcctcatcgtcagactcctgctgcagctgggcaga
actgaggaggtgctgccttttctggagcatctccagtgtctcagcagcacctggctcagc
ccaggcagccgtgctgggccgctggacgccgctgccaccttgggctacctgtatgacaag
aagtgcctgcccaacgtggcgctggcctgcgtcagggccttcgctcccagcagcaccaag
gggacgcccacgcccatctggaaggctggcttcatcctccagaacgcttccaagctggtg
gggaagcagctggacgggagcagcatcccggcagtggcttgtttgtacctgaagcgagcg
ctgcagttctgctgccacagcagggccgtgcccgcgcagaggacgctgtgcgccgtcctg
tccaggctgctcctgcagcacgggcggctggacggggctctttgtgacgcagccagggct
gcaggcctggccaggctgctgggggaggaggaggcctttgagtcctcgctgtccctgggc
tggctgcacctcctgcagcagcagccgggcccggccggcgccgtgctgcggcgctgcctg
cgcggcacggccggcgagagccaggccggcgccgtgcacaacctgctggccatggccctc
ggcggccagggccggctgcaggaggctgcagagaacttcctgagggccctgcacaaggcc
aaggagacgggcagcggcaggaaccaggcggtggccctggccaacctgggccagctgagc
ctgtcgtgcggggccgcccagctggccgagctctacctgctgtgggcagtgcggctcttt
gccccgctccagggccaccggcagctggacacggagctggcacaggtgctgctgtggctg
gcacaggccatggtggacaggcagaggatggaagatgccaaactctgctatgagctggcg
ctggggttcgccctgaggtggcagaacctgaggagtcagctgcacgtcaccgagcgtctg
tgccatttctacagcagagtgtgccccgagctgcaggcctgcatcgcctaccacgagcac
tgggcatccctggcacggcagctgcaggacagggagctggagggcaatgccaggcaggcg
ctcagccagctctaccaggctttgggcacgcctcaggctctgagacaatccctggactgc
accaagcagtgcctgaggatcttcatcgaccttgaggaggctgcgagggcagcagaggcc
tggctgcaggcaggaaagctctattaccttctccaggaggatgagctggtggaaatgtac
ttccaggcaggcatccagactgctctgagaggggacaacttctccttggccatggatctt
tatgagaaagcaggtgacaccttctttaacggcagccggaacagggcccgagctgtggag
ttttacaggggaggtgctgtgcccttggccagaaaactcaaggccacccagacagagctg
aggctgttcaacaaactggcagagctgcagatcagcctgcagggctacgagaaggctctg
gagtttgccacgctggcagccaggctcagcctcagggttggggatcagctgcaggagctg
gttgccttccaccgcctggccacagcctatgagctgctgcacatgtacgagatggccgag
gattgctacctgaagacactggccctgcgcccccccgtgctgcagagctcagcagaggct
ctgtactactgcaaactctactggcacctgggcaacctgaccctgcacaagctcaaggat
gaacaggatgcatcctcctacttcctgctggccctcgctgcagctgctgagctgggagac
caggagctgcaagcccagctctgcgccaagctggctgccgtccccagagccccaggggca
cctgagggcacagcaggctgtgccacagagcggccacggtggctgagtgaaggtggccac
gtggtgtga
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