Ficedula albicollis (collared flycatcher): 101811438
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Entry
101811438 CDS
T02815
Symbol
SPTBN1
Name
(RefSeq) spectrin beta, non-erythrocytic 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04517
IgSF CAM signaling
fab04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101811438 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101811438 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
fab04812
]
101811438 (SPTBN1)
Cytoskeleton proteins [BR:
fab04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
101811438 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
101811438 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
101811438
NCBI-ProteinID:
XP_005042733
UniProt:
U3K9Y0
LinkDB
All DBs
Position
3:527560..644169
Genome browser
AA seq
2359 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSVVRLLSKHKAFEDEMSGRSGHFQQAIKEGEDMIAEEHFGSEKIRERIK
DIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIASYRPTIDSLHEQAKALPQEHAESPDVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPGEKIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNYH
LECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAEK
LESEHPDQAQAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSRT
QTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLR
QRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTTL
EGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKNR
EAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMA
ELASNKEWLEKIEKEGMQLIAEKPETEAVVKEKLTGLHQMWDELESTTQTKAQRLFDANK
AELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQS
QARALSQEGKSTDEVDGKRLTVEKKFLELLEPLNERKANLLASKEIHQFNRDVEDEILWV
GERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITESSPNAEV
IQQRLADLKQLWNLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYAG
LKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQ
LQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVRD
LMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKH
YASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLSS
REIGQSVDEVEKLIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRQPPT
PEPKVAEDGDSQQQWDGTKGEQVSQNGLPSDQESPRVAETAETNEMVNGAAEQRTSSKES
SPVPSPTSERKAKSGVQAQTAATLPAKTQEIPSAQMEGFLHRKHEWETHSKKASSRSWHN
VYCVINNQEMGFYKDSKAAASGIPYHNEIPVSLKDAVCEVAVDYKKKKHVFKLRLTDGNE
YLFQAKDDEEMNTWIQAITSAISSDKIEVSPTTQSTPASSRAQTLPASVTITSESSPGKR
EKDKEKDKEKRFSLFGKKK
NT seq
7080 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacggtagcgacagattacgacaacatcgagatccagcagcagtacagcgac
gtcaacaaccgctgggatgtcgacgactgggacaacgagaacagctctgctcggctcttc
gagcgctcccgcatcaaggccctggcagatgaacgtgaggcagttcagaagaagaccttc
acaaagtgggtgaattcccacctggctcgtgtgtcctgccggatcacagacctgtacact
gaccttcgagatgggaggatgctcatcaaactcctggaagtgctttcaggagagagactt
cctaaaccaactaaaggaaggatgcgcatccattgcctggagaatgtggataaagccctc
cagttcctgaaagagcaacgagtgcacctggaaaacatgggatctcatgatattgtggat
gggaatcacaggctgacacttggcctcatttggactattatcctgagattccagatccaa
gatatcagtgttgaaactgaagacaacaaagagaagaaatctgctaaagatgctttgctt
ttgtggtgccagatgaaaacagctgggtaccccaacgtcaatatccacaacttcacaaca
agctggagggatggcatggcgttcaatgcactgatccataagcacaggcctgatttgatt
gattttgacaagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaacctt
gcagagcagcaccttggtcttaccaagctcctggaccccgaggatatcagtgttgatcac
cctgatgaaaagtcaatcatcacctatgtggtgacatattaccactacttctccaagatg
aaagctttggctgtcgaaggaaaacggattggaaaggtgcttgacaatgccattgaaaca
gagaaaatgatagaaaaatacgagtccctggcttctgacctgctggagtggattgagcaa
accattatcatcctcaacaatcgcaagtttgccaactccctggttggggtgcagcagcag
ctgcaggcgttcaacacttaccgcacagtggagaaaccacccaaatttacagaaaaagga
aacctggaagtgctgctttttaccatccaaagcaaaatgagagccaacaatcagaaagtg
tacatgccgagggagggcaaactcatctctgacattaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgaaatgagctcatcagacaagagaaactg
gaacaactcgcacggagattcgatcgcaaggcagctatgagagaaacttggctgagcgaa
aatcaacggctcgtctctcaggacaattttggctttgacctcccagcagtggaggctgcc
acgaagaagcacgaggccatcgagacggacatcgcggcgtacgaggagcgggtgcaggcc
gtggtggcggtggccaaggagctggagaccgagaactaccacgacatcaagcgcatcacc
gccaggaaggacaacgtcatccgcctctgggagtacctcctggagctgctgcgggcgcgc
cggcagcgcctggagatgaacctgggcctgcagaagatcttccaggaaatgctctacatc
atggactggatggacgagatgaaggtgcttttgctgtcccaagactatggcaaacatttg
ttgggagttgaagacctgctgcagaaacatgctctggtagaagctgacattgctattcag
gctgagagagtgagaggggtcaatgcctctgctcagaagtttgccactgatggagaaggt
tacaagccctgtgacccgcaggtgatcagggaccgcgtggctcacatggagttctgctac
caggagctctgccagctggcggccgagcgccgcgcgcgcctcgaggagtcccggcgcctc
tggaaattcttctgggaaatggctgaggaggaaggctggatcagggagaaggagcagatc
ctgtcgtccgatgactacgggaaggacctaaccagcgtcgtccgactcttgagtaagcac
aaggcgtttgaggacgagatgagcggccgcagcggccactttcagcaggcgattaaagaa
ggtgaagacatgatcgcggaagagcattttgggtctgagaagatcagagaaagaattaag
gatatccgggagcagtgggctaacctggagcagctgtctgccatcaggaagaagcggctg
gaggaagcctctctccttcaccagttccaggctgacgccgacgatatcgacgcgtggatg
ttggacatcctcaagattgtgtccagcaatgatgttggccacgatgaatattccactcag
tccttggtgaagaagcacaaagacgtggccgaggagattgcgagctaccggccgaccatc
gactcccttcacgagcaggccaaggccctgccgcaggagcacgccgagtccccggacgtg
cagggcaggctgtccgggatcgaggagaggtacaaggaggtggctgagctgacccggctg
cgcaagcaggccctgcaggacacccttgctctctataagatgttcagtgaggctgatgct
tgtgagctttggatcgacgaaaaggagaagtggctgaacaatatgcagattccagagaag
ctggaggacctggaggtgatccagcacaggtttgaaagcttggagccagaaatgaacaac
caggcatcccgtgtggccgtggtgaaccagattgccaggcagctgatgcacagcggccac
cccggggagaagatcaaagcacagcaagataaactcaacacaaggtggagccagttcaga
gaactggtagataggaagaaggatgctctgctctctgctctgagtatccagaactaccac
cttgaatgtaatgagaccaaatcctggatcagggaaaagaccaaagtgattgaatccaca
caagacctgggtaatgacctggctggagtgatggccttgcagaggaagctgacgggcatg
gaacgggacctggtggccatcgaagccaagctcagtgacctgcaaaaggaggcagagaag
ctggagtcagagcatcctgaccaggcacaagccatcctgtcacggcttgcagagatcaat
gatgtgtgggaggaaatgaagaccaccctgaagaaccgggaagagtccctgggagaggcc
agcaagctgcagcagttcctgagagatctggatgacttccagtcctggctctccagaaca
cagactgcaattgcctccgaggacatgcccaacaccctgacagaggctgagaagctgctc
actcagcacgagaatatcaagaatgagatcaacaactacgaggaagattatcagaagatg
agggacatgggtgagatggtgacacaagggcaaaccgacgctcagtacatgttcctgcgc
cagcgcctccaggctttggacaccggctggaatgagcttcacaaaatgtgggagaacagg
caaaatctcctttcccagtctcatgcctaccagctgtttctcagagataccaagcaagca
gaagctttccttaataaccaggagtatgttctggcgcacacggagatgccaactaccttg
gaaggagcagaagctgctattaaaaagcaggaggatttcatgaccaccatggatgccaat
gaagaaaagatcaacgcagttgtggagacaggcaggaggctcgttagtgatgggaacatt
aactctgataaaatccaggagaaggtggactctattgatgacagacataggaagaaccgt
gaagcagccagtgaacttctgatgagactgaaagataacagggatctccaaaagtttctt
caagattgccaagagctctccctctggatcaatgagaagatgctcacagcccaggatatg
tcctatgatgaggcaaggaacctgcacagcaagtggctgaagcatcaggcattcatggca
gagcttgcatccaacaaagagtggctggagaagattgaaaaggagggaatgcagctcatt
gcagagaagccagagacggaggccgtggtgaaggagaagctgacaggtctccaccaaatg
tgggacgagcttgaatccaccacccagaccaaggctcagcgtctcttcgatgccaacaag
gcagagcttttcacccagagctgtgcagacctggacaagtggctgaatggtttggagagc
caaatccagtcggatgactacggaaaggatctcaccagtgtcaacatcctgttgaagaag
cagcagatgctggagaatcaaatggatgtccgtaagaaggagatagaggagctgcagagc
caggcaagggctttgagccaagagggcaagagcacagatgaagtcgatggcaaacgcctt
actgtagaaaagaaattcttggagctgctggagcctttgaatgagagaaaggccaacctg
ctggcctccaaagagatccaccagttcaaccgggatgtggaagatgaaattttgtgggtc
ggagagaggatgcccatagctacatctactgatcatggacacaacctccagactgtgcag
ctactaataaagaaaaatcagacccttcagaaagaaatccagggccaccagcctcgtatc
gatgacattttcgagaggagtcagaacatcatcacagagagcagccccaatgctgaggtc
attcagcagagacttgcagacctgaagcagctgtggaacctgctcatcgaggagacggag
aagcgccacaagcgcctggaggagtctcacagggcgcagcagtattacttcgatgcggcc
gaggccgaggcctggatgagcgagcaggagctctacatgatgtcagaagagaaagccaag
gatgaacagagtgcggtgtccatgctgaagaaacaccagattttggaacaagctgtagaa
gattatgctgaaactgtgcaccagctttcaaagaccagcagaactttggtggcagataat
cacccagaaagcgagcgcatcagcatgcggcagtccaaggtggacaagctgtacgcaggc
ctgaaggacctggctgaggagaggaggggcaagctggacgagaggcaccggctgttccag
ctcaaccgcgaggtggatgacctggagcagtggatcgccgagagggaggtggtggcaggg
tcccacgagctgggccaggactacgagcacgtcacgatgctgcaggagcgcttccgcgag
ttcgcccgggacaccgggaacatcgggcaggagcgcgtggacaccgtgaaccacatggcc
gacgagctcatcaactccggccactcggacgccgccaccatcgccgagtggaaggacggg
ctcaacgaggcctgggccgacctgctggagctcattgacaccaggacacagatcctcgca
gcctcctacgaactgcacaaattctaccacgacgccaaggagatcttagggcgcatccag
gacaagcataagaaactgcccgaggagcttggcagagaccaaaacacggtggaaacacta
cagagaatgcacacgacgtttgagcacgatatccaggccctgggcacccaggtgcggcag
ctgcaggaggatgcagcacgcctccaggctgcctacgctggggacaaggctgatgacatc
cagaagagggagaacgaggtcctggaggcgtggaaggcactgctggatgcctgtgagggc
cgcagggtgaggctggtggacacaggagacaaattccgcttcttcagcatggtgcgggat
ctcatgctctggatggaggatgttatccggcagatagaggcccaggaaaagccaagggat
gtttcatctgtggaactcctcatgaacaatcaccaggggatcaaagcagaaattgatgcc
cgaaatgacagcttcactacgtgcattgagcttggcaagtctctgctggccaggaaacac
tacgcatctgaggagatcaaggaaaagctcctgcagctgacagaaaagagaaaagaaatg
attgacaagtgggaagacagatgggagtggctgagactgattttggaggtgcaccagttc
tccagagatgccagcgtggctgaggcctggctgctgggacaggagccctacctgtccagc
cgtgagatagggcagagcgtggatgaggtggagaaactaatcaagaggcacgaggcgttt
gagaaatccgcagccacctgggacgagaggtttgcagcgctggagagactgaccacgctg
gaactgctggaagtgcgtcggcagcaggaggaggaggagcggaagaggcagccgcccacc
ccggagcccaaggttgcagaggatggagactcccagcagcaatgggatgggacaaaagga
gagcaggtttcccaaaacggtttgccctcagaccaggaatctccacgggtggcagaaact
gcagaaaccaacgaaatggtcaacggagctgcagagcagaggacgagttccaaagagtcc
agtcccgttccctccccgacgtcagagcgcaaagccaagagcggcgttcaggcgcagact
gctgccaccctcccagccaaaacgcaggagatcccctcggcccagatggagggcttctta
caccgcaagcacgagtgggagacacacagcaagaaagcctccagcaggtcatggcacaac
gtgtactgtgtcatcaacaaccaagagatgggcttctacaaggactcaaaagctgctgct
tctggcatcccttaccacaacgagatccccgtcagcttgaaggacgccgtgtgcgaagta
gcggtggattacaaaaagaagaagcatgtgttcaagctcagattgaccgatggcaacgaa
tacctcttccaagccaaagacgatgaggagatgaacacgtggatccaggccatcacatca
gcgatctcttcagacaaaatcgaggtgtccccgaccacccagagcactccagcctccagc
cgtgcccagaccctgcctgccagcgtcacaataaccagcgagtccagccctggcaagcgg
gagaaggacaaagagaaagacaaggagaaaagattcagcctttttggtaaaaagaagtga
DBGET
integrated database retrieval system
