Ficedula albicollis (collared flycatcher): 101811638
Help
Entry
101811638 CDS
T02815
Symbol
ARID1B
Name
(RefSeq) AT-rich interaction domain 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101811638 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fab03000
]
101811638 (ARID1B)
03021 Transcription machinery [BR:
fab03021
]
101811638 (ARID1B)
03036 Chromosome and associated proteins [BR:
fab03036
]
101811638 (ARID1B)
Transcription factors [BR:
fab03000
]
Eukaryotic type
Helix-turn-helix
ARID
101811638 (ARID1B)
Transcription machinery [BR:
fab03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101811638 (ARID1B)
Chromosome and associated proteins [BR:
fab03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101811638 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
101811638
NCBI-ProteinID:
XP_016152850
UniProt:
U3KDG9
LinkDB
All DBs
Position
3:complement(54106844..54443801)
Genome browser
AA seq
1831 aa
AA seq
DB search
MGMGKDMGAQYGAANPAWAAAQQRNHPAMSPGNTGQAISRTQQGSAMDPMVMKRPQLYGM
GNNPHSQAQQSSPYPGQSYGPPGPQRYPVGMQGRAPAAMAGMQYPQQQIPPQYGQQGVSG
YCQQGQQPYYNQQPQPQHLPPQAQYLSQAQQRYQAQQDMSQEGYGTRSQPPMAPGKPNHE
DLNLIQQERPSSLPVEVLASEDATFGHKDLSGSIDDLPTGTEATLSSAVSASGSTSSQGE
QSNPAQSPFSPHASPHLSGIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPPGS
QSESSSHPALSQSPMPQDRGFMAGIQRNPQMSQYGPQQTGPSMSPHPSPGGQVHPGIGSF
QQSNSSGTYGPQMSQYGPQGNYSRPPTYSGVPNTSYSGPGPGMGINANSQMHGQGPSQPC
GTMPLGRMPSAGMQSRPFPGNMSSMTPNSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQ
AAANSAQSRQGNFPAMNQSGIMGSSSPYTQPMNNSSGLMNPQAPPYSMAPNMVNSSAGNA
PMGLADMMTPGESKLPLPLKADGKEEGAPQPESKSKDSYSSQGISQPPTPGNLPVPSPMS
PSSASISSFHGDESDSISSPGWPKTPSSPKSSSSTTTGEKITKVYELGNEPERKLWVDRY
LTFMEERGTPVASLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATTLNVGTSSS
AASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKIQPPSPANSGSLQGPQTPQ
STGSNSMTEVPGDLKPPTPASTPHGQMTPMQGGRNSAVSVHDPFSDVSDSAFPKRNSMTP
NAPYQQGINMPDMMGRMPYEPNKDPFGGMRKVPGSNEPFMTPGQMPNSGIQDMYNQSPSG
AMSNMSMSQRQQFSYGSGYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGMYPQQQNYKRHM
DGMYGPPAKRHEGDMYNMQYGNQQQEMYNQYGNAYTGPDRRPMQGQYPYPYNRERMQGPG
QMQQHGIPPQMIGGPMQSSSSSEGPQQNMWPTRNDMPYPYQNRQGPGGPAQAPPYPGMNR
TDDMMVPDQRINHESQWPSHVNQRQPSYMSSSASMQPITRPPQSSYQTPPSMPNHISRAP
SPASFQRSLENRMSPSKSPFLPSMKMQKVIPTVPVSQVTGPPPQPPPIRREITFPPGSVE
ASQPVLKPRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLS
QLSGFLELLVEYFRKCLIDIFGILMEYEVGDPGHKALDHKAAKKDDSQSLAEDTGKDEND
ECIDYFDEDEEEGEDEKVEGEEKSVVFSTPGAIADPSERPKQASKFDKLPIKIVKKNNLF
VVDRSDKLGRVQEFDSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRKAPPPLNSPSKKKD
LEGKGESEEQQEKSITATIDDVLSARPGALPEDSNSGSQTESSKFPFGIHQAKSHRNIKL
LEDEPRSRDETPLCTITHWQDSLAKRCICVSNIVRSLSFVPGNDTEMSKHPGLVLILGKL
ILLHHEHPERKRAPQTYEKEEEEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLS
AYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDL
ILATPPFSRQEKLYATLVRYVGDRKNPVCREMSMALLSNLAQGDTLAARAIAVQKGSIGN
LISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLH
EGRLLDISISAVLNSLVASVICDVLFQIGQL
NT seq
5496 nt
NT seq
+upstream
nt +downstream
nt
atgggcatgggcaaggacatgggcgcccagtacggagcggcgaacccggcctgggcagcg
gcacaacaaaggaaccacccggcgatgagccccgggaacaccgggcaggccatcagcagg
acccagcagggcagcgcgatggacccgatggtgatgaagcggccgcagctgtacggcatg
ggcaataaccctcactctcaggcacagcagagcagcccctaccccgggcagtcctacggc
cctcccggcccccagcgctatcccgtgggaatgcagggccgagccccggcagccatggca
ggaatgcagtatccacagcaacagatcccacctcagtatggtcagcaaggtgtaagtggc
tactgccagcagggccagcagccgtactacaaccagcagccgcagccccagcacctgccg
ccccaggcacagtatctgtcgcaggcccagcagaggtaccaggctcagcaggacatgtct
caggaaggctatggaaccagatctcaaccccctatggccccaggaaagcctaaccatgaa
gacttgaatctaatccagcaagaaagaccatcgagcttaccagttgaagtcttggcctcc
gaggatgctacatttggacacaaggatttgtctggatccattgacgacttgccgactgga
actgaagcaaccctcagctcagccgttagcgcatcaggctctacgagcagccaaggggag
cagagcaaccctgcacagtctccgttttcccctcatgcttctccacatctctctggcatc
cctgggggcccatcgccttcccctgtaggctcacccgttggaagcaaccagtcaagatct
ggtcccatttctccagcgagtattccaggcagtcagatgccaccacagcctcctggcagc
cagtcagaatccagctcccaccctgccttgagccagtcaccaatgccacaggaccgaggt
tttatggcaggcatacagaggaacccccaaatgtcacagtatggacctcaacaaactgga
ccttccatgtcaccacacccttcacctggaggtcaagtgcatcctggaattggtagcttt
cagcagagtaattcaagtggtacttatgggcctcaaatgagccagtatggaccacaagga
aactactccagaccaccgacgtacagcggtgtgcccaacacaagttacagtggcccagga
cctggcatgggtataaatgccaacagtcagatgcatggacaggggccaagccagccttgt
ggtaccatgcccctgggacggatgccatcagctgggatgcagagcagaccatttcctgga
aacatgagcagtatgacccccaattctcctggcatgtctcagcagggaggccctgggatg
ggcccacccatgccgactgtgaaccgtaaggcacaggaggcggctgctgcagtgatgcag
gctgctgcaaactccgctcagagcaggcaaggcaattttcctgccatgaatcagagtggc
attatgggatccagctctccctacactcagccgatgaacaacagctctggcctgatgaac
ccgcaggctcctccttacagcatggcacccaacatggtgaacagctcagcaggtaacgca
cctatgggtcttgcagatatgatgacacccggtgagtccaaactcccccttcctctcaaa
gcagatggcaaagaagaaggagccccccagcccgagagcaagtcaaaggatagctacagc
tctcagggtatttctcagcccccaaccccaggcaacctgccagtcccttccccaatgtcc
ccaagctctgctagcatctcctcatttcatggagatgaaagtgatagcattagcagccca
ggctggccaaagactccatcaagccctaaatcaagttcctccaccacaactggagagaag
atcactaaagtctatgagctaggaaatgagccggagcgcaagctgtgggtggatcggtac
ctgacgttcatggaggagaggggcactcctgtggccagtctgccagctgtgggcaagaag
cccttggacctgttcaggctctatgtctgtgtcaaagagatcggaggtttagcacaggtt
aataaaaacaagaagtggcgtgagctggcaaccaccttgaacgttggcacttcgagcagc
gcagccagctccctgaaaaaacaatacattcagtacctgtttgccttcgagtgcaagatt
gagcgaggggaggagccccctccagaagtcttcagcactggagataccaagaaacaacct
aagattcagccgccatctcctgctaattctggttccttgcaaggcccacagactccacag
tccactggtagtaattccatgacagaagtgccaggcgatttgaagcccccaacaccagca
tccacacctcatggacagatgacacctatgcagggtggcagaaacagcgccgtcagtgtg
catgatcccttttctgatgtaagcgattcagcgttcccaaagcgaaactccatgacgcca
aatgcaccataccagcagggaataaacatgccagatatgatgggaaggatgccatatgag
ccgaataaagatcctttcggtggaatgagaaaagtgcctggaagcaatgagcctttcatg
acccctggacaaatgcctaacagtggaatacaagatatgtataaccagagtccatctgga
gcaatgtccaacatgagcatgagccagcgacagcaattctcttatggaagtggctatgac
aggaggcatgaaccgtatgggcagcagtatccaggacaaggacctccctcaggacagcca
ccatatggaggacatcaacctggaatgtatccacagcagcagaactacaagagacacatg
gatggcatgtacgggcctccagccaaacgccacgaaggggatatgtataacatgcagtat
ggcaaccagcagcaggaaatgtataaccagtacggcaacgcttacacagggcctgacagg
aggcccatgcagggacagtacccttatccatataacagggagaggatgcagggcccagga
cagatgcagcagcatggaatacctccccagatgattggtggccccatgcagtcgtcatcc
tccagtgaaggtcctcagcagaacatgtggccaacacgaaatgatatgccttacccttac
cagaacaggcaaggtccaggaggccctgcacaggcccctccgtatccagggatgaatcgc
actgatgatatgatggtacctgaccagaggataaaccacgagagtcagtggccttctcat
gtcaaccaacggcagccttcttatatgtcatcctcagcttccatgcagcctatcactaga
cctcctcagtcatcctaccagacaccaccctctatgccaaaccacatctccagagctcca
agcccagcgtccttccagcgctcgttggaaaaccgtatgtctccaagcaagtctcctttc
ctgccctccatgaagatgcaaaaggttattcccacagttccagtgtcacaggtcacagga
cctccaccccaaccaccaccgattaggcgagagattaccttccccccaggctctgtagaa
gcatcccaaccagtcttaaaaccaagacgaaagattacctcaaaagatatcgtaactcct
gaggcctggagagtgatgatgtctcttaaatctggtcttttggctgaaagtacctgggcg
ctagacactattaatattcttctgtatgatgacagcactgttgctactttcaacctctct
cagttgtctggatttcttgagcttttagtagaatattttagaaaatgcctgattgacatt
tttggaatccttatggaatatgaagtgggagatccaggccacaaagcacttgatcacaaa
gcagccaagaaagatgatagtcagtccttggcagaggatactgggaaagatgagaatgac
gaatgtattgactattttgatgaagatgaggaggagggggaggatgaaaaggtagaagga
gaagaaaagagcgttgttttttccactcctggtgccattgctgatccaagtgagaggcca
aaacaagctagtaaatttgacaagctgccaataaagattgtaaagaaaaataatctattt
gttgttgaccgatctgacaaacttggacgcgttcaggaatttgatagtggacttctccac
tggcagcttggtggtggtgacacaactgagcatatccagactcactttgaaagcaagatg
gagattccaccacgcaggaaagcccctcctcccttgaactctccaagcaaaaagaaggac
ctcgaggggaaaggcgaatctgaggagcaacaagaaaagagcataacagcaaccattgat
gatgtcctctcagctcggccaggagcattacctgaagactcaaactctggctcccaaaca
gagagcagtaaatttccctttgggatccatcaagccaaaagccaccggaatattaaattg
ctagaggatgagccaaggagccgggatgagactcctctatgcaccataactcactggcaa
gactccttggccaaacgctgcatctgtgtgtcaaatatcgtccgtagcttgtcttttgtg
cctggcaatgacaccgaaatgtccaaacatccaggcttggtgctgatcttgggaaagttg
atccttcttcaccacgagcatccagaaagaaagcgagcgccgcagacttacgagaaagag
gaagaggaggacaaaggggtggcctgcagcaaggatgagtggtggtgggactgcctcgag
gtcttgagggataatacattggtcacattagccaacatttctgggcagctagacttgtct
gcttacacagaaagcatctgtttgccaattttggatggcttgctgcactggatggtgtgc
ccgtctgcagaggcacaggatccttttccaaccgtggggcccaactcagttctttcgcct
cagagacttgtgctggagaccctgtgtaagctcagtatccaggacaataatgtggacctt
atcttggccacccccccgttcagccgtcaggagaaactctacgctactttagttaggtac
gttggggaccgcaaaaacccggtctgccgagaaatgtccatggcgctcctatcgaacctt
gcccagggggacacattagcagcaagggcaatagctgtgcagaagggaagcattggaaac
ttgataagcttcctggaggatggggtcactatggcccagtaccagcagagccagcataac
ctcatgcacatgcagcctccgcctctggagccgcctagcgtagacatgatgtgcagggca
gccaaggccttgctggccatggcgagagtggacgagaaccgctccgagttccttttgcac
gagggtcgtttgctggatatctcaatatctgctgtcctgaactctctggttgcatctgtc
atctgtgatgtactttttcagattgggcagttatga
DBGET
integrated database retrieval system