Ficedula albicollis (collared flycatcher): 101811757
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Entry
101811757 CDS
T02815
Symbol
TAF1A
Name
(RefSeq) TATA-box binding protein associated factor, RNA polymerase I subunit A
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fab03021
]
101811757 (TAF1A)
Transcription machinery [BR:
fab03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
101811757 (TAF1A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
Mob1_phocein
Motif
Other DBs
NCBI-GeneID:
101811757
NCBI-ProteinID:
XP_005043108
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Position
3:17664844..17676672
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AA seq
466 aa
AA seq
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MDSFLEEEEDEEAPAAVGKRRRRSSPGAPAAPQPPLRLPFLPERPVSSNEHKLNFRKSKE
ACLSYVQDALLQKQWKRAAEFLTCYVESLEKDYSREHISPSEMIWRIGTEILWHHSQSSM
KEFNCFIEQMKTLGVKRFLKVCLEHVFHLLCNGQIDEAYQNLSLAESWRFGEQTAIQDKE
MKLIQAYRGLLDYYSWSKQKNILLEHGEDGFSDLAVEQEMHGYFRKAAVNLKEIIKIPGV
WDIFVKSYVDLLEFYGDHNEAHQVLNEYAYNSKFPANPNAHVYLYQFLKRQGESKKSLIS
ALKILHDIVPSHELMIDFNTMLQKSKKRKKRRLGLEVIFTALDYAGWKENAKAWSCLARQ
VKQIVISEKHLDWIKQEWSSRKDWWPAFHFSRYLAKRNWQENKSLSYEKALVAGLLLGKD
CKYFKYVSHQGCKAQLKRFRMLKKFVNRHNLVYMRISGPPDSSVQP
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggacagcttcctggaggaggaggaggacgaggaggcgccggcggcggtggggaagaga
aggaggaggagcagccccggcgccccggcggccccgcagccgcccctgcgcctgcccttc
ctgccggagcggccggtatcttccaacgaacacaagttaaacttcaggaagagtaaggaa
gcatgtttaagttacgttcaggatgccttactccaaaagcagtggaaaagggctgcagag
ttcctgacctgctatgttgagtcgctagaaaaggactattccagagaacacattagtcca
tcagagatgatttggagaataggaactgaaattttgtggcatcattcccaaagcagcatg
aaagagttcaactgtttcatagaacagatgaaaactttaggagtaaaaaggttcttgaag
gtctgcttggagcatgtctttcatcttctctgtaatgggcaaatagatgaagcctaccag
aacctgtccctggcagaaagctggaggtttggagagcaaacagccattcaggataaggaa
atgaagctgattcaggcttacagaggactcttggactactatagctggtctaagcaaaag
aatatcctgttagagcatggtgaggatggattttcagacttggctgttgagcaggaaatg
cacggttactttcggaaggcagcagtgaacttgaaggagattattaaaatacctggagtc
tgggacatctttgtgaaaagctatgtggatttgttggagttctatggagaccacaacgag
gcccaccaagtgttaaatgaatatgcctacaactccaagttccctgctaaccccaatgct
catgtctacctctatcagttcctcaagaggcagggtgaatccaagaaatccctcatatct
gcactgaagatcttgcatgatattgttccttctcatgaactgatgatagattttaatacc
atgcttcaaaaatcaaagaaaagaaaaaaacgtcggctgggcctagaagttatttttaca
gccttggattatgctggctggaaagaaaatgcaaaagcatggagctgtttggcaagacag
gtgaaacaaattgtaatctctgagaagcatcttgactggatcaagcaagagtggagctcc
aggaaggactggtggccagccttccattttagccgttacttggcaaaaaggaattggcag
gaaaataaaagcctttcatatgaaaaagccctggtggctggactcctactgggaaaggat
tgcaaatactttaaatatgtatcacaccaaggctgcaaagctcagttgaaaaggtttcgg
atgctgaagaagtttgtgaacaggcacaatcttgtctacatgagaatatctggtcctcca
gattcctctgttcagccttga
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