Ficedula albicollis (collared flycatcher): 101811787
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Entry
101811787 CDS
T02815
Symbol
PPARGC1B
Name
(RefSeq) PPARG coactivator 1 beta
KO
K17962
peroxisome proliferator-activated receptor gamma coactivator 1-beta
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
fab03029
]
101811787 (PPARGC1B)
Mitochondrial biogenesis [BR:
fab03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
101811787 (PPARGC1B)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
101811787
NCBI-ProteinID:
XP_005053728
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All DBs
Position
13:complement(1099696..1114118)
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AA seq
993 aa
AA seq
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MYGLAKNKSLCLCSHGKIWGEGGDKVVTRLFLEQGQEGRDKPQQYEVSGEEHLYSDFPEI
DLSQLDAGDLDSAGCFSELHWAGERSETDSSQYSTDDSELFQIIDSENEALLAALTETLD
DIQGDDMGLAAFPTMEEGDTLNPATTSPAPSPKPTAPVSGGPPPAPECDELSLLKKLLLS
PSPPSCEVQRDGSARRPGTPKSRPARPCTKVEGPRDRRASIPQAQSRSCTELHRHLTSSS
SCSQTKAPQAPEECPGSGHHPSLGDCAQHEDDSDCSEDSLSSGDSVEDGPGSQFSCQGEL
HSVLELIRYMHTYCLPPRKLPAREPADSKPQPCCSPFKRAKADCAPAPGAAQSRPGSCKK
PGASFSILKELLARDLLCDVSKPYRLGKPVYAALARPPGSCSPVPEGEDASGTCTSRVRA
AAAEKGEPRQSPEAEVPGELGGPEDDAGRQEGTLGTAKVARKQDSAVHAVRRSKRLNPEF
GHWLSFLEPPTECSVPLGCREAQCPVLEGFSAEEPAAEVEVGGTAPPAEPQPLCLGSLGD
GELGTESQRCALLEQTETPRCLTLSLAQTDPTFGKRNFEPMLTVELCGTAGLTPPTTPPY
KPAEEDLYKPDIPQEPGKEEGITPGPGGTGDVAASRKAPRKHPERTELLAHLSRPLPEQQ
GLLKRPFSRSFGDHDYCQVLKPEAALQRKVLKSWEPPSQVETEHKRRVPAAHYQGLELGK
DTGTEMLWKDGVKQLRDQEIRASLTKHFGFLDSALDDEDMVFCKTPEYDTVFEDSCSESG
SPGEEEEEEEEEEEEEEHGNTKLCLRRNPLSRTSLHYCSRSRSSSGSSCCRSRSPASRRT
FRCENGEQCQLGSGHRGQLKKRREKAIGEGRVVYIRNLSSSMSSSELKKRFEVFGEIVEC
QVLSRTNRGEKYGFITYRYSEHAALSLRNGPSLRKRNEPSFQLSSGGLGRFFWTRYADLD
CSTDESSPAPVKSKFETMDFDSLLQEAQLSLHR
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgtatggcttggctaaaaataaaagcctttgcctgtgttcccatgggaagatttgggga
gaagggggagacaaagttgtcacaagactttttctggagcagggacaggaaggcagggac
aagccacagcagtatgaggtgtctggcgaggagcacctctactctgacttccctgagatc
gatctgtcccagctggacgccggtgacctggactctgctggctgcttcagcgagctgcac
tgggctggggagcgctcagagaccgactccagccagtacagcaccgacgactccgagctc
ttccagataatagacagcgagaacgaagcactgctggcagccctcaccgagactttggat
gatatacagggagatgacatgggcctggctgccttcccaactatggaagagggggacacg
ctcaaccctgccaccacctcacctgccccctcccccaaacccaccgccccggtctcgggg
gggccgcccccggcccccgagtgtgatgagctgtctctactgaagaagctgctcctgtct
ccatcacctccgagctgtgaggttcagcgggacgggagcgcccggcgcccggggacccca
aaatcccgtcctgcacggccctgcacaaaggtggagggtccccgggacaggagggcgagc
atcccgcaggcgcagagccgcagctgcacggagctgcaccggcacctgacctccagcagc
tcctgctcccagaccaaagccccccaggcacccgaggagtgcccgggcagcggccaccac
ccgtccctgggtgactgtgcccagcacgaggacgacagcgactgcagcgaggactcgctg
agctctggtgactcggtggaggacggccctggcagccagttctcctgccagggggagctg
cactcggtgctggagctgatccgctacatgcacacctactgcctgcccccccgcaagctg
cccgcccgcgagcccgccgacagcaaaccccagccctgctgcagccccttcaagagagcc
aaagcggactgtgcccccgcgccgggcgctgcccagagccgccctggcagctgcaagaag
cccggagcgtccttctccatcctgaaggagctgctggcgcgggacctgctgtgcgacgtg
agcaagccgtaccgcctgggcaagcccgtgtacgcagccctggcgcggccccccggctcc
tgctcccccgtgcccgagggtgaggatgccagcgggacgtgcacgtccagagtgagagca
gcggcggcggagaagggagagccccggcagagccccgaggcggaggtgccaggggagctg
ggtggccctgaggacgatgctggcaggcaggagggcaccctgggcacggccaaggtggcc
cgcaagcaggacagcgctgttcacgccgtgcgccgctccaagagactcaaccccgagttt
gggcactggctctccttccttgagcctcccaccgagtgctcggtgcccctgggctgcagg
gaggcccagtgcccagtgctggagggcttctctgccgaggagccggctgctgaggtggag
gtggggggcacagccccgccggcagagccccagcccctctgcctgggctccctgggggat
ggcgagctgggcactgagagccagcgctgtgccctgctggagcagacagaaacaccccgg
tgtctcacgctgtccttggcacaaactgacccaacctttgggaagagaaactttgagcca
atgctgactgtggagctgtgtgggacagcaggtctcactccgcccaccactccaccatac
aaacccgccgaggaggacctgtacaagccagacatcccccaggagccagggaaggaggag
gggatcacccccggccccgggggcaccggggacgtggcagcctcgaggaaagcccccagg
aagcacccggagaggacagagctgctggcccacctgagccggccgctccccgagcagcag
gggctgctcaagagacccttctcccgctccttcggggaccacgactactgccaggtgctg
aaacccgaggctgccctgcagaggaaggtgctcaagtcctgggagcccccgagccaggtg
gagacagagcacaagaggagggtcccagctgctcactaccagggactggagctgggcaag
gacacgggcaccgagatgctgtggaaggacggcgtcaagcagctgagagaccaggagatc
agagccagcttaacaaagcactttggctttctggacagtgccctcgacgacgaggacatg
gtcttctgcaagacccccgagtacgacaccgtctttgaggacagctgcagtgagagcggc
tcccccggggaggaggaggaggaggaggaagaggaggaggaagaggaggagcatggcaac
accaagctgtgcctgaggagaaaccccctttccaggaccagtttgcattactgctccagg
agcaggtccagctcgggctcctcgtgctgccgctcgcggtcacctgccagcagacgcacc
ttcaggtgtgagaacggcgagcagtgtcagcttggcagcgggcaccggggccagctgaag
aagagacgggaaaaggccattggggaaggccgggtggtgtacatcagaaacctctccagc
agcatgagctccagcgagctgaagaaacgcttcgaggtgtttggtgaaatcgtggagtgt
caggtcctgtccaggactaacaggggggagaagtacggcttcatcacgtaccgctactcc
gagcacgccgccttatcgctgaggaacggcccctcgctgaggaagaggaacgagccctcc
ttccagctcagctctgggggcctgggccgcttcttctggaccagatatgctgacctggat
tgcagcacggacgagtcctccccagctccggtgaaaagcaagttcgagaccatggatttc
gacagcttgctgcaggaggcccagctcagcctgcatcggtaa
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