Ficedula albicollis (collared flycatcher): 101812235
Help
Entry
101812235 CDS
T02815
Symbol
LRPPRC
Name
(RefSeq) leucine rich pentatricopeptide repeat containing
KO
K17964
leucine-rich PPR motif-containing protein, mitochondrial
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
fab03029
]
101812235 (LRPPRC)
Mitochondrial biogenesis [BR:
fab03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
101812235 (LRPPRC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR_2
TPR_24
PPR
PPR_1
PPR_3
PPR_long
ANAPC3
DASH_Spc19
Motif
Other DBs
NCBI-GeneID:
101812235
NCBI-ProteinID:
XP_005043203
UniProt:
U3KE40
LinkDB
All DBs
Position
3:complement(25592456..25669605)
Genome browser
AA seq
1335 aa
AA seq
DB search
MNQIRFLTLAPQEEGTVKEEPVSEVRTRPTWQFDWALNKVDNSVRKTGRIPKALLLKIFQ
EISKAGCPGSNQTLLLLQSCGAVLPEVLSPERTELAHMMWDKMKELGAVYDTSHYNALLK
VYLQNEHKFSPTEFLARMEEANVQPNRVTYQRLIAAYCNEGDIEGASKILGFMKSKDLPI
TEAVFSSLVKGHARSGDMKSAENILSVMRMAGVEPGPDTYLSLLNVYAEKGDADSIKKTL
EQIEKTKGYLMDRILVQVIFSLAKAGYPQHIEDVKGRIKFEKELIPDVMNLCLTLITHGF
EDISFSILKSLSHLSREDLDQGSFFLQHCVNRDLPVSKLKQFCTELKEAKMHSAPLPFVL
RCALETNRLALAIDVMKLMKEEGLPLRPHYCWPLLVAYQKQNNLKGIFEVLKTMHKLGVD
LDAETYTDYVFKNFADTETAHAQLKENGCLFESVGLYTAELRSEALKGRLDKVLSILSSA
NTPATDSRLFRNSLIWGFKSSDDVQLWSKITELLYKDERYCLTPPGPTEAVGYFLYHLID
SMSDSEVQAKEERLRQYFHQLKKMNIVIPTSHYNGICRLLDSTQVPELIKDARLLCNKKS
LSTDISESAKSDVSALEKKLEQRKAENQPITDVLKQLIHALCEEENMQKALEVKAKYEPD
MVVGGYAALINLCCRHDNVEEAMNLKEKVFPRNSPVALDSGKYVALIEVLEKHGRLEDAI
NILTEMKEKDVPISGRTVASFLRILNAAATRGDVETVNRLHETIANLGLVQTAALHAPLI
TVHLEKDDMPAALEALISCYKKYGKILQLHNIYCKLVEKGDADLLQKVSDFVSREYGDMM
ALYDLFFAFLRTGKYKEAKKVIETPGLRAHSGRLQWFAKKCILNNQMEALEQLVELTRNL
FECDRDAMYYHLLELCESSKEWGKAEAIWTKIQEENIVPREKTLILLADIFKKNGQVVPF
EVPKGRPEDSRSAASGEELKIQMLCKKNKAKEAYNIFRRMPEKDESHYRSCDILVKALLA
QNCLDEALDVKRIAETHIKGFTLNSAASSLLIISQVRRDYLKDALAALKGMLDRGMLPTR
SAVTALIQALAEKGDIKSLQVLENILGDITKSLGISDSIIPNAIALAHTKSNDLDAAVKY
LEPLLISGVQNPDQAVKSISFLLRIVSEEGLEPALEKFGAMAERLASQFGIYRPVTDLFL
QYISADRVDDARSLIQRWDAIAQEKRTLGRFMARSASKPGQAKKIETLLELIPERLDPAT
AYRYLLRCYELDGDVASVKATYEKTKAKNIELHEISLKSLATFLKKVGEPVPFTEPPETF
KFYVEKWKNRRLEAS
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaaataagattccttacacttgcacctcaagaggaaggaactgtcaaagaagaa
ccagtttcagaagttcgaaccagaccgacctggcagtttgactgggcattaaataaagtg
gataactctgtcagaaaaactggccgcatccctaaagctcttctactaaaaatcttccag
gaaataagcaaagcagggtgtccagggagtaaccagaccttgcttttgttacaaagttgt
ggtgctgtcttaccagaagtattgtcacctgaaagaacagaactggcccatatgatgtgg
gacaagatgaaagaacttggtgctgtgtatgatacaagccattacaatgctttgcttaaa
gtctatcttcagaatgagcacaagttttctccgacagaattcttggccaggatggaggaa
gctaatgtacagcccaatcgagttacataccaaaggttgattgctgcttactgcaatgag
ggtgacattgaaggagcaagtaagattcttggatttatgaagagcaaagatctccccatc
actgaggcagtattcagtagccttgtgaaaggacatgcaagatcaggagatatgaagagt
gcagaaaacatcctttcagtgatgaggatggctggtgttgaaccaggtccagacacctat
ttatcactgctgaatgtatatgctgaaaagggtgatgctgatagcatcaaaaagactcta
gagcagattgagaagactaaagggtaccttatggacaggattctggtacaggtgattttt
agccttgccaaggctggatatccacagcacattgaggatgttaaaggacgcataaaattt
gaaaaggaattaattccagatgtaatgaacctgtgtttgactctgataactcatggcttt
gaagatattagcttcagcattttgaagtctttaagtcatttatcacgtgaagatttggac
caaggtagcttcttcttgcaacattgtgtaaatagagatctgcctgtgagcaagctgaag
caattctgtaccgaattaaaagaagcgaagatgcactcggcaccgttaccatttgtcttg
cgctgcgctttggagaccaacagattggccttggccattgacgtgatgaagctgatgaag
gaggaaggcttgccactcagacctcactattgctggccgctgctagttgcataccagaaa
cagaataatcttaaaggtatctttgaggtcctcaaaacaatgcataaattgggggtggac
cttgatgcagaaacatatacggactatgtttttaaaaactttgctgatactgaaactgcc
catgcccagctgaaggaaaatggctgcctgtttgaaagtgttgggctctatacagcagaa
ctaagaagtgaagccctgaaggggagactggacaaagttctttctatactgtcttcagca
aacacacctgctactgatagtcgtctatttagaaacagcctcatttggggttttaaaagc
tcagatgatgtacagctatggagcaagataacagaactgttgtacaaggatgaacgttat
tgcctgacgcctccaggaccaactgaagctgttggctattttctttatcacttgattgac
agcatgagtgactcagaggtacaggccaaggaggagcgtttgagacaatacttccatcag
ctgaagaagatgaatatagttatccctacaagccactacaacggcatttgcagactgctg
gactccactcaagttcctgaattaattaaggatgcaaggttactgtgtaacaaaaaatcc
ctgtctacagacatttcagaaagtgctaaatctgacgtgtctgctttggagaagaaacta
gaacagcgaaaagctgaaaaccagcctattacagatgtcttgaaacaactcatacatgct
ctttgtgaagaagagaatatgcaaaaagcccttgaagtgaaagccaaatacgaaccggac
atggttgtcggtggctatgcagccttaataaatttgtgctgtcgacatgataatgtagaa
gaggcaatgaacctgaaagaaaaagtcttccctaggaattcacctgttgctcttgacagt
ggaaagtacgtagcactgatagaagtcttagaaaagcatggtagactagaagatgctatt
aacattctaacggagatgaaagagaaggatgttcctatctcaggcagaacagttgcatct
tttctccgcattcttaatgctgctgccacgcgaggtgatgttgaaacagtgaatcgatta
catgagaccattgcaaacctggggttggtgcaaactgctgcccttcatgcccctctgatt
acagttcaccttgaaaaggatgacatgcctgcagctctggaagctttaatcagctgttac
aagaagtatggtaaaattcttcaacttcataacatctactgtaaactggtagaaaaagga
gatgctgatcttctgcagaaggtttcagattttgtaagcagagaatatggtgacatgatg
gctctttacgatctcttcttcgccttcttgcgaacagggaaatacaaagaggccaagaag
gtcatcgagactcctggcttgagagcacattctggaagattgcagtggtttgcaaaaaag
tgtatattaaataatcagatggaagctttggaacagttggtagaattaactcgaaatctg
tttgaatgtgatagagatgcgatgtactaccacctgctcgaactgtgtgagagcagcaag
gagtggggaaaggctgaagctatttggactaaaattcaagaagaaaatattgttcctcgt
gagaaaacactgattttacttgctgatatatttaagaaaaacggtcaggttgttccattt
gaagtacctaaggggagacctgaagatagcagaagtgctgctagtggggaagaactgaaa
atacaaatgctttgcaagaaaaataaagcaaaagaggcctacaatattttcaggagaatg
ccagaaaaggatgagtctcattatcgttcctgtgacatccttgtaaaagcattgttagca
cagaattgtcttgatgaagcccttgacgtgaaacgcattgctgagacccacatcaagggc
ttcacactgaacagtgctgccagcagcctcctcatcatatcgcaagttaggcgggattat
ttgaaagatgccttggctgctttaaaaggaatgcttgacaggggcatgttgcctactaga
tcagcagttactgctcttattcaggccctggcagaaaaaggagatataaagagcctgcaa
gtacttgaaaacatcctgggagacatcacaaaatcacttggtatatctgactcaataata
cctaatgcaattgcattggctcatactaaaagcaatgaccttgatgctgctgtgaagtac
cttgagcctctgcttatctctggcgtacagaatcctgatcaagctgtcaaaagtatttcg
tttttgttaagaattgtgtctgaggaaggattagaaccagctttggaaaaatttggtgcg
atggcagaacgactggccagtcagtttggaatttacagacctgtcacagatcttttcctt
cagtatatcagtgcagacagagtggatgatgccagatcgttgatacagaggtgggatgca
atagctcaggagaagagaactttagggcgttttatggctagatcagcatctaaacctgga
caggcaaagaagattgagactcttctagaactgattcctgagcgtctcgatccagcaaca
gcctaccggtacctcttgagatgttatgaattggatggggatgttgcttctgtaaaggct
acgtatgagaaaacaaaagccaagaatatagagctgcacgagatctctttgaaatcttta
gcaacctttctgaagaaagtaggagagcctgtccctttcactgaaccccctgagacattc
aagttctatgtggaaaaatggaagaacagaagattggaagcgtcatga
DBGET
integrated database retrieval system
