Ficedula albicollis (collared flycatcher): 101812247
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Entry
101812247 CDS
T02815
Symbol
VCL
Name
(RefSeq) vinculin
KO
K05700
vinculin
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04510
Focal adhesion
fab04517
IgSF CAM signaling
fab04518
Integrin signaling
fab04519
Cadherin signaling
fab04520
Adherens junction
fab04810
Regulation of actin cytoskeleton
fab04820
Cytoskeleton in muscle cells
fab05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101812247 (VCL)
04518 Integrin signaling
101812247 (VCL)
04519 Cadherin signaling
101812247 (VCL)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101812247 (VCL)
04520 Adherens junction
101812247 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101812247 (VCL)
04810 Regulation of actin cytoskeleton
101812247 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
101812247 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
fab04812
]
101812247 (VCL)
04147 Exosome [BR:
fab04147
]
101812247 (VCL)
Cytoskeleton proteins [BR:
fab04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
101812247 (VCL)
Exosome [BR:
fab04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101812247 (VCL)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Spectrin_SYNE1_2
Motif
Other DBs
NCBI-GeneID:
101812247
NCBI-ProteinID:
XP_016154829
LinkDB
All DBs
Position
6:complement(15120637..15181338)
Genome browser
AA seq
1102 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVSAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVRAAQMLQADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKSQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKKDTEAMKRALALIDSKMNQAKGWLRDPNAPPGDAGEQAI
RQILDEAGKAGELCAGKERREILGTCKTLGQMTDQLADLRARGQGATPMAMQKAQQVSQG
LDLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHIRGIMNEARKVA
ELCEEPKERDDILRSLGEISALTAKLSDLRRHGKGDSPEARALAKQIATSLQNLQSKTNR
AVANTRPVKAAVHLEGKIEQAQRWIDNPTVADRGVGQAAIRGLVAEGRRLANVMMGPYRQ
DLLAKCDRVDQLSAQLAELAARGEGESPQARAIAAQLQDSLKDLKSRMQEAMTQEVSDVF
SDTTTPIKLLAVAATAPSDAPNRDEVFDERAANFENHAARLGATAEKAAAVGTANKTTVE
GIQATVKSARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDT
KSLLDASEEAIKKDLDKCKVAMANMQPQMLVAGATSIARRANRILLVAKREVENSEDPKF
REAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYKILGAVAKVREAFQPQE
PDFPPPPPDLEHLHLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEAINQPMM
MAARQLHDEARKWSSKPDVTVINEAAEAGVDVDEEDDADVEFTLPYDIEDDYEPELLLMP
TNQPVNQPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQ
CAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRT
NISDEESEQVRGAKAVMVAWSC
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcttccacacgcgcaccatcgagagcatcctggagccggtggcccagcagatc
tcccacctggtcatcatgcacgaggagggggaggtggacggaaaggccatcccggacctc
accgcccccgtgtcggccgtgcaggccgctgtcagcaacctggtgcgggttggaaaagag
actgtgcagacaacagaagaccagatcttgaaaagggatatgccaccagcatttatcaaa
gtggagaatgcctgcaccaaactggttcgggcagcccagatgctgcaagcagatccttac
tcagtaccagctcgtgactatctcattgatggatcaagaggaatcctttctggaacatca
gacttgctcctgacattcgatgaagcagaggtccgtaaaatcatccgtgtctgcaaagga
atattggaatatctgactgtggcagaagtggtagagacaatggaagatctggtgacttac
acgaagaatttagggccaggaatgacaaagatggccaaaatgattgacgagagacaacag
gaattaactcatcaggaacatagggttatgctggtgaactccatgaatacagtcaaggag
ctattgccagtacttatttcagctatgaagatttttgtaaccacaaaaaactctaaaagc
cagggaatagaagaggccttgaaaaatcgcaatttcacagtagagaaaatgagcgctgag
ataaatgaaataattcgtgtgttgcaactcacttcgtgggatgaagatgcctgggcaagc
aagaaggacactgaagccatgaagagagctttagccttaatagattcaaagatgaatcag
gcaaaaggttggctgagagatccaaatgcacctccaggggatgctggtgaacaggccata
aggcagatccttgatgaagctggcaaagcaggagagctgtgtgcaggcaaagagcgcaga
gagatcctgggcacgtgcaaaaccctggggcaaatgactgatcagctggctgacctgcgg
gctagagggcagggtgctacacccatggctatgcagaaagcccagcaggtgtcccagggg
ctggacttgctcactgccaaagtggagaacgcagcccgcaagctggaggccatgaccaac
tccaagcaggcaattgctaagaagattgatgctgctcagaactggcttgcagatcctaat
gggggcagtgaaggagaagagcacattcggggaattatgaacgaagcaaggaaagttgca
gaactatgtgaggagcctaaagaaagagatgatatccttcgttccttgggggaaatctct
gctttgacagccaagctgtcagatctgcgacgacatgggaaaggtgactctcctgaggcc
cgtgctttggctaagcaaatagctacatcgcttcagaatttacagtccaaaacaaacagg
gctgtagcaaatacgaggccagtgaaagcagctgtccatttggagggcaagattgaacaa
gctcagaggtggatagacaatcctacagttgctgatcggggagtaggccaggctgccatc
cgcgggctggttgccgaaggccggcgcttggccaacgtcatgatgggcccgtaccggcag
gacctgctggccaagtgtgaccgcgtggaccagctctctgcccagctggctgagctggct
gctcgaggggagggcgagtccccccaggccagggccattgctgctcagctccaggactcg
ctgaaggatcttaaatcacggatgcaagaagcaatgacccaggaagtttctgatgttttt
agtgacaccacaactcctattaaattgttagcagtagcagccactgctccctctgatgct
cccaacagagatgaggtgtttgatgaaagagcagcgaactttgaaaaccatgctgctaga
ctgggagctacagcagaaaaagcagctgcagttggaactgccaataaaactaccgtggag
ggcattcaggcaacagtgaaatcagcaagggaactcaccccacaggtagtatcagcagct
cgtatcctcctgagaaatcctggaaatcaagctgcttatgaacattttgagaccatgaaa
aaccaatggattgacaatgtagaaaaaatgacagggttggtggatgaagccattgatact
aaatctctgttggatgcatcagaagaggccattaagaaggacctggataaatgtaaagtt
gcaatggccaacatgcaacctcagatgctggtagctggtgccaccagcatcgccagacga
gcaaaccgcatcctgctggtggcaaaacgggaggtggaaaattctgaagaccctaaattt
cgggaggctgttaaagcagcctctgatgagctgagcaaaactatctcacccatggtaatg
gatgctaaagctgtggcaggcaacatttctgatcctggtttgcagaagagtttcttggat
tctggatacaaaattctgggagctgtggccaaagtcagagaagccttccagcctcaggaa
ccagattttcctcctcctcctcctgaccttgagcaccttcatctgactgatgagcttgct
cctccgaaaccaccgctgccagagggtgaggttcccccgcccagaccaccaccacctgaa
gaaaaggatgaagagttcccagagcagaaggcaggagaagcaatcaatcagcccatgatg
atggctgctagacagctgcatgatgaagcccggaaatggtctagcaagcctgatgtgact
gtgattaatgaagcggctgaggctggtgtagatgtagatgaggaggatgatgcagatgtt
gaattcactctcccctatgacattgaagatgattacgagcctgagctgctgttaatgcca
accaatcagcccgttaaccagcccattctggctgctgctcagtctctccatcgggaagca
accaagtggtctagtaagggcaacgacatcatcgcggcggcgaagcgcatggcgctgctc
atggccgagatgtcgcgcctggtgcggggcggcagcggcaacaagcgcgccctcatccag
tgcgccaaggacatcgccaaggcgtccgacgaggtcacccggctcgccaaggaggtggcc
aagcagtgcacggacaagcgcatcaggacaaacctcctgcaggtctgtgagcgaatccca
accatcagtacacagctgaaaattctctccactgtcaaagctaccatgctgggcagaact
aatatcagtgatgaagagtcggaacaggtaagaggtgcaaaagctgtgatggtagcatgg
agttgttga
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integrated database retrieval system
