Ficedula albicollis (collared flycatcher): 101812248
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Entry
101812248 CDS
T02815
Symbol
POLL
Name
(RefSeq) DNA polymerase lambda
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03410
Base excision repair
fab03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
101812248 (POLL)
03450 Non-homologous end-joining
101812248 (POLL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fab03400
]
101812248 (POLL)
Enzymes [BR:
fab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
101812248 (POLL)
DNA repair and recombination proteins [BR:
fab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
101812248 (POLL)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
101812248 (POLL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
BRCT
HHH_5
BRCT_2
NTP_transf_2
HHH
PTCB-BRCT
LIG3_BRCT
zf-LYAR
Motif
Other DBs
NCBI-GeneID:
101812248
NCBI-ProteinID:
XP_016154897
UniProt:
U3K1T5
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All DBs
Position
6:23230886..23241282
Genome browser
AA seq
579 aa
AA seq
DB search
MEPRGIVKAFPKRKKVRDDSGKSIPPKIPKEEGTDIPEAEWLKPVIAYVLQAGLGQARAE
IFHRQIVLHGGAVHSQLSSEVTHVIVAEDMDCDRALRLLRVTRLRPGLQLVKASWLSACL
RDQKLLSTAGYGVFVPHRYLEEEEFQKEQQQILDREKIQPPAEEGAVKPNTELQGEDSSQ
QGLGTLGQQQLAEKYSDDEDSEGEDAGVSQGDLEALITGRYPVKSSEEISDSSCTVAQPP
SKWVCALSSNTKKENHNQCITEKLEVLAKAYSVQGDKWRALGYYKAINALKSYHKPVTSY
QEACKIPGIGKRMAEKILEILESGHLRKLDHISESVPVLELFSNIWGAGVKTAQMWYQQG
FRTLDDIRSKATLSSQQAVGLKHYTDFLERMPREEAAEIEQTVRQAALALKPGLVCVACG
SYRRGKATCGDVDVLVTHPDGQSHRGVFSKLLDSLRRSGFLTDDLVSQEDNGDQQKYLGV
CRLPGPARRHRRLDIIVVPYREFACALLYFTGSAHFNRSMRALAKAKGMSLSEHALSSAV
LRGPGGAKVSAGRALPTPTERDVFLQLGLPYREPSERDW
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggagccacgagggattgtcaaagcctttcccaagaggaagaaggtgagggatgactcg
gggaaaagcatccctccaaagatcccaaaagaggaaggaacagacatacctgaggcagag
tggctgaaacctgtcatcgcctacgtgctgcaagctggccttggccaggccagggcggag
atcttccacaggcagattgtcctgcacgggggggccgtgcacagccagctctcctcggag
gtgacccacgtcatcgtggctgaggacatggactgcgatcgcgccctccggctcctcaga
gtgaccaggctgcgcccggggctgcagctggtgaaggcatcctggctcagtgcttgcctg
agagaccagaagctgctgagtactgctggctatggtgtctttgtccctcacaggtacctg
gaggaggaagaattccagaaagaacagcaacagatcctggacagagaaaaaatccagccc
ccagcagaggagggagcagtgaaaccgaatactgaattgcagggggaggattcctcacag
caaggcttgggcacccttggacagcagcaactggctgagaaatactctgatgatgaagac
agtgagggagaagatgctggtgtcagccagggagacctggaagcattgattactggccgc
taccctgtgaaatcatcagaggagatcagtgacagctcttgcacagtggcccagcctccc
agcaagtgggtttgtgctctgtcttccaacaccaagaaggaaaatcacaatcaatgcatc
acagagaaactggaagtgctggcaaaggcttactctgtccagggggacaagtggagagct
ctgggctactacaaagcaatcaatgcactcaagagctaccataaaccagtcacatcctac
caggaagcctgtaaaatccctgggattgggaagcggatggcagagaagatcctggagatc
ttggagagtggccacctgcgcaagctggatcacatcagtgagagtgtgcctgtgctggag
ttattttccaatatctggggagcaggagtcaagacagctcagatgtggtaccagcagggt
ttccggacgctggatgacatccgcagcaaggccaccctgagcagccagcaggctgtgggg
ctgaagcactacaccgatttcctggagcgcatgcctcgggaggaagctgcagaaatagag
cagactgtcagacaagctgccctggccctgaagcctggtttggtgtgtgttgcctgtggc
tcctaccgtcgggggaaggccacctgtggagatgtggatgtgctggtcactcaccctgat
gggcagtctcaccgtggggtgttcagcaagctgctcgacagcctccgcaggagcggcttc
ctcacagatgacctggtgagtcaggaggacaacggtgatcagcagaagtacctgggcgtg
tgccgcctgcccgggccggcgcggcgtcaccgccggctcgacatcattgtggtgccgtac
cgggagttcgcctgcgccctgctctacttcacgggctcggcgcacttcaaccgctccatg
cgcgccctggccaaggccaagggcatgagcctgtcggagcacgcgctcagctcggccgtg
ctgcgcggccctggcggcgccaaggtctcagctggccgcgccctgcccactcccaccgag
agagatgtcttcctgcagctggggctgccctaccgggagccctccgagcgggactggtga
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