Ficedula albicollis (collared flycatcher): 101812380
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Entry
101812380 CDS
T02815
Symbol
RBM22
Name
(RefSeq) RNA binding motif protein 22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101812380 (RBM22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fab03041
]
101812380 (RBM22)
Spliceosome [BR:
fab03041
]
Complex B
Other components
Prp19-related factors
101812380 (RBM22)
Complex C
101812380 (RBM22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_3
zf-CCCH_10
zf-CCCH_12
zf-CCCH_PARP12
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
101812380
NCBI-ProteinID:
XP_005053530
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All DBs
Position
13:6442588..6450052
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AA seq
420 aa
AA seq
DB search
MSTSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSLKDEMPKSDVNKEYYTQN
MEREIANSDGTRPVGALGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLG
DTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNV
KWGRSQAARGKEKDKEGTTESGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPSAV
VNIALPPPPGIAPPPPPGFGPHMFHAMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtccacatcgctggggtccaacacctacaaccggcagaactgggaggatgcggacttc
cctatcctgtgccagacatgtcttggagaaaatccctatattcggatgaccaaagaaaaa
tatggaaaagaatgcaagatttgtgccaggccgttcacggtgttccgctggtgccccggg
gtgcggatgcgcttcaagaagacagaagtgtgccagacctgcagcaagctgaagaacgtc
tgtcagacctgcctgctcgacctggagtatggtttgcctatccaagtccgggatgcagga
ctgtcccttaaggatgaaatgcctaaatctgatgtcaataaagaatactacacccagaac
atggagcgagagatagccaattctgatggcactagaccagttggtgcactaggaaaagct
acttctaccagtgacatgctgctgaagctggctcgaaccactccgtactacaaacgcaac
cgtcctcacatctgttccttctgggtaaaaggagagtgcaagagaggagaggagtgtccc
tacagacatgagaaacctacagatccagatgatcctctggctgaccagaacatcaaagat
cgttactatggaattaatgatcctgtggctgacaaacttctgaaacgagcatcaaccatg
cctcgtctagatcctcctgaagacaagactattactacactgtatgttggagggcttgga
gataccatcactgaatcagatctcagaaatcacttctaccagtttggggagatccggaca
ataacagtggtgcagaggcagcaatgtgctttcatccagtttgccaccagacaggctgca
gaggtggctgctgagaaatccttcaacaagctcatagtcaatggccgcaggctcaacgtc
aaatggggaaggtcccaggcagcaagaggaaaagaaaaggacaaggaaggcactacagaa
tcagggataaagctggagccagttccaggacttcctggagccctcccccctcctccagct
gcagaagaggaggcttctgcaaattatttcaatctacctccaagtggcccttcagctgtg
gtgaacattgccctgccacctcctcctggcatcgctccaccgccgcctccaggtttcgga
ccacacatgttccatgccatggggcccccacctcccttcatgagagccccaggccccatc
cattacccatcccaggatccccagaggatgggtgcccacgcaggaaagcacagcagcccc
tag
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