Ficedula albicollis (collared flycatcher): 101812454
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Entry
101812454 CDS
T02815
Symbol
CACNA1B
Name
(RefSeq) calcium voltage-gated channel subunit alpha1 B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04010
MAPK signaling pathway
fab04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101812454 (CACNA1B)
04020 Calcium signaling pathway
101812454 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
fab04040
]
101812454 (CACNA1B)
Ion channels [BR:
fab04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
101812454 (CACNA1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
101812454
NCBI-ProteinID:
XP_016157875
LinkDB
All DBs
Position
17:2224327..2570391
Genome browser
AA seq
2328 aa
AA seq
DB search
MARFGDDLPTRYGGGGPAGAGRGSSRQGGPQAGQRMYKQSMAQRARTMALYNPIPVKQNC
FTVNRSLFIFSEDNVIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATAGTDFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYMGK
FHKTCFSNETGEEVGDFPCGEEPPARQCESGTTCREYWQGPNYGITNFDNILFAVLTVFQ
CITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENR
RAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDVLKRAAIKKSKNDLI
HAEEGEDHFTDICSVGSPFARASLKSGKNESSSYFRRKEKMFRFFIRRMVKAQSFYWVVL
CVVALNTLCVAMVHYDQPEKLTTALYFAEFVFLGLFLTEMSLKMYGLGPRNYFHSSFNCF
DFGVIVGSIFEVIWAAVKPGTSFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSI
ISLLFLLFLFIVVFALLGMQLFGGQFNFQDETPTTNFDTFPAAILTVFQILTGEDWNAVM
YHGIESQGGVHSGMFSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEMEEAT
NQKLALQKAKEVAEVSPMSAANISIAAKQQNSSKSKSVWEQRTSQIRMHNFRASCEALYN
ELDPEERVRYATTLHIRPDMKTHLDRPLVVEPRGEGRNNISKLSPGDAQEVVEHPKPTAG
DGAEAPRKHHRHRDKEKLGEQEKGDGTKDESGDAGAGGKEERHRQHRSRSKEVEGKSDRS
RGQEGGKRHHRRGSVEEGADKEHRRHRSHRHPSERPGKDGNGNGSRGERRSRHRGAPRSA
HRDGEPRAESGDEPHRRHRLRNRALAACEALEKDGGDKEGEAGDKEHRNHQPKENQCELE
ASGSGSGPGSVPVHTLPSTYLQKVPEQPEDADNQKNVTRMIQPPLDKTTTVNIPVTITAP
PGDTTVIPMNNVEFESKTEEKKDVDDLTKNGPKPILPYSSMFILSPTNPIRRLFHYIVNL
RYFEMVILIVIALSSIALAAEDPVQAESPRNDALKYLDYIFTGVFTFEMVIKMIDLGLLL
HPGSYFRDLWNILDFIVVSGALVAFAFSGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLK
AVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGRFFYCTDESKELEKDCRGQYLDY
EKNEVEAQPREWKKYEFHYDNVLWALLTLFTVSTGEGWPTVLKHSVDATYEEQGPSPGYR
MEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACIDFAISAKPL
TRYMPQNKQSFQYKMWKFVVSPPFEYFIMVMIALNTIVLMMKFYDAPEAYEEMLKCLNIV
FTSMFSMECVLKIIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIADTDNFINLSFLRL
FRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALDDE
TSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSNRACDPLSGLTKKECGSDFAYFY
FVSFIFLCSFLRPDKIKGIKSTSIYWGPSDLCFLVCLPFSLPSFSFAPLCCLSPTPSPFS
SPQSGWIPVSWCFCLHPCGPSGRISYTDMYEMLRHMSPPLGLGKKCPARVAYKRLVRMNM
PISPEDLTVHFTSTLMALIRTALEIKLASGGVKQHQCDAELRKEISLVWPNLSQKTLDLL
VPPHKPDEMTVGKVYAALMIFDFYKQNKNSREQVQPPGGLCQPGPVSLFHPLKATLEQSQ
PTSFSNAKAFLRQKSSASLNNGGALPPPEGGIKESSSWGTQRTQDVFYETRSPAFERGHS
EEIPIERVVEMKEISPTVANGEPQPGLESQGRAASMPRLAAETQPIPDTSPMKRSVSTLA
PQRPHAMHLYEYSLERMPPEQGHHHHHHRCHRRKEKKQKSLDRAAHHLPDGQAVGQSGES
SSKDKKQERGRSQERKQHSSSSSEKQRFYSCDRYGSRDRAQPKSAEQSRPTSPNGGPEHG
PHRQGSGSVNGSPLLSTSGANTPCRGRRQLPQTPLTPRPSITYKTANSSPVHFATFQTPP
FSPGRLSRGLSEHNALLRGDPPPPPPPPRDAAAASPQRAAHEDALTFEEAVATNSGRSSR
TSYVSSLTSQPHQTRRVPNGYHYTLGLSAGPGARGRSYYHEADEDDWC
NT seq
6987 nt
NT seq
+upstream
nt +downstream
nt
atggctcggtttggggatgatctgccaacccgctatggaggtggagggccggccggggct
ggaagagggagcagccggcaaggtggcccccaagccggccaaaggatgtataaacagtcg
atggctcagagagccaggactatggctctctacaaccccatccctgtcaaacagaactgc
ttcacagtcaacagatccctcttcatcttcagtgaagataatgttatacggaaatacgcc
aagcgaataacagagtggcctccatttgaatacatgattttagctacaatcatagccaat
tgtattgtgctggctctggaacaacatttgccggatggagacaagacaccgatgtcagag
agactggacgacaccgagccgtactttattggaatattttgttttgaagctggtatcaaa
atcatcgctctgggctttgtttttcacaaaggctcttacctgaggaacggctggaacgtg
atggattttgtcgtggtcctaacagggatcctggcgactgctggcacagattttgacctg
cggaccctgcgagcggtgcgggtgctgcggccgctcaaactcgtgtcgggaatcccaagc
ctgcaggttgtcctcaagtccatcatgaaggccatggtgcccctgctgcagattgggctg
ctcctcttctttgccatcgtgatgtttgccatcattgggctggagttttacatgggcaaa
ttccacaaaacctgcttttccaacgagacaggtgaggaggtgggggattttccctgtgga
gaggagcctcctgccaggcagtgtgagagtgggaccacgtgcagggagtactggcagggc
cccaactacggcatcaccaactttgacaacatcctgttcgccgtgctcaccgtgttccag
tgcatcaccatggagggctggactgacatcctctacaacacgaacgacgctgcaggaaac
acctggaactggctttacttcatccctctcatcatcattggctctttcttcatgctcaac
ttggtgctgggcgtcttatcaggggagtttgccaaggagcgggagcgggtggagaaccgc
cgggcgttcctgaagctgcgccggcagcagcaaatcgagcgggagctcaacgggtacctg
gagtggatcttcaaagcagaggaggtcatgctggccgaggaggacaagaacgcggaggag
aagtcccctctggacgtgttgaaaagagccgcaataaagaagagcaaaaatgacctgatt
catgcagaagaaggtgaggaccatttcacagacatttgctccgttgggtctccctttgcc
cgtgccagtttgaagagtgggaagaacgagagctcgtcctacttcaggaggaaggagaag
atgttccgcttcttcatccggcgcatggtgaaggctcagagcttctactgggtcgtgctc
tgcgtggtggccctcaacaccctgtgtgtggccatggtgcactatgaccagcctgagaag
ctgaccactgctctctatttcgctgagtttgttttcctggggctgttcctcactgagatg
tctttgaagatgtatgggctggggccaaggaattacttccactcttccttcaactgcttt
gactttggggtcatcgtgggcagcatttttgaggtgatttgggctgcagtgaagccggga
acctccttcggcatcagcgtcctgcgagccctgcgcctgctcaggatcttcaaggtgaca
aagtactggaattccctgaggaatctggtggtgtccttgctgaactccatgaagtccatc
atcagtttgctgttcctgctcttcctgttcatcgtggtctttgctctgctggggatgcag
ctctttggaggacagttcaatttccaagatgaaactccaaccacgaatttcgataccttc
cctgctgccatcctcacagtcttccagatcctgacaggggaggactggaatgctgtgatg
taccacgggatcgagtcgcagggcggtgtccactcggggatgttctcctccatctacttc
atcgtcctcaccctgtttggcaactatactctcctgaacgtcttcctggccatcgctgtg
gacaacctggccaacgcccaggagctgaccaaggacgaggaggagatggaggaagccacc
aaccagaagctggccctgcagaaggccaaggaagtggcagaagtgagccccatgtcagca
gccaacatctccatagctgccaagcagcagaattcctccaaatccaagtcggtttgggag
cagaggacgagccagatccggatgcacaacttccgagccagctgcgaggcgctgtacaac
gagctggaccccgaggagcgggtccgctacgccaccaccctgcacatccgccccgacatg
aaaacgcacctggaccggccgctggtggtggagccccgcggcgagggcaggaacaacatc
agcaagctgagccccggcgatgcccaggaggtggtggagcaccccaaacccaccgccggc
gatggggcagaggcgccgcggaagcaccaccggcatcgggacaaggagaagctgggagag
caggagaagggagacgggaccaaggatgagagcggcgacgccggggcgggcggcaaggag
gagaggcaccggcagcaccgcagccgcagcaaggaggtggaagggaaaagcgaccgaagc
agggggcaggaaggggggaagaggcaccaccggcgcggctcggtggaggaaggggctgac
aaggagcaccgcaggcaccgcagccaccggcacccgtccgagcggccgggcaaggacggg
aacggcaacgggagccgcggcgagcggcgctcccggcaccgcggcgcgccccgcagcgcg
cacagggacggggagccccgggcagagagcggggacgagccccaccgccggcaccgcctc
aggaacagggctctggccgcctgcgaggccctggagaaggacggcggcgacaaggagggc
gaggctggcgacaaggagcaccgcaatcaccagcccaaggagaaccagtgtgagctggag
gccagtggcagtggcagtggccctgggagtgtccctgtgcacaccctgcccagcacttac
ctgcagaaggtgcctgagcagccggaggatgccgacaaccagaagaacgtgacgaggatg
attcagccccccctggacaaaaccaccactgtgaacatccctgtcaccatcactgcccct
ccaggggacaccactgtcatcccaatgaacaacgtggagttcgaaagcaaaacagaggag
aagaaagacgtcgatgacttgacgaaaaatgggcccaaaccaatcctgccttacagttcc
atgttcatcctcagccccacaaacccgatccggcgcctgttccactacatcgtcaacctg
cgctactttgagatggtgatcctgatcgtcatcgccctcagcagcatcgccctggctgca
gaggaccctgtgcaagctgagtctcccaggaatgatgctctgaaatacctggattatata
tttacaggagtcttcacctttgagatggtgatcaagatgattgacttggggctgctgctc
caccctggctcctacttccgtgacctgtggaatatcctggacttcattgtggtcagtggg
gccctcgtggcttttgccttctcaggaaccaaaggcaaggacatcaacaccatcaagtcc
ctgcgagtcctgcgtgttctcaggcctctgaagaccataaaacggctgccaaaactgaag
gctgtctttgactgcgtggtgaactccctgaagaacgtcctcaacatcctcatcgtttac
atgctcttcatgttcatcttcgccgtcatcgccgtgcagctcttcaagggccgcttcttc
tactgcacggacgagtccaaggagctggagaaggactgcaggggtcagtacctcgattat
gaaaaaaatgaggtggaggcacagcccagggaatggaaaaaatacgagttccactacgac
aacgtgctctgggctctgctcacgctcttcaccgtgtccacaggggaagggtggccaact
gtgctgaagcactcagtggatgccacctacgaggaacaggggcccagccctggctacagg
atggaaatgtccatcttttacgtggtgtattttgttgtcttcccttttttctttgtcaac
atctttgtggcgttaatcatcatcaccttccaggagcaaggagataaagtgatgtcagag
tgcagcctcgagaaaaacgagagagcctgcatagactttgccataagtgccaagcccctg
acccgctacatgcctcagaacaagcaatccttccagtacaagatgtggaaattcgtggtg
tcccctccctttgagtattttatcatggtcatgattgctctcaacaccatcgtcctcatg
atgaagttctatgatgctccagaagcatacgaagaaatgctgaaatgcctgaatattgtg
tttacatccatgttttccatggaatgtgtgctgaagatcattgcctttggtgtgctgaat
tatttccgagatgcctggaatgtctttgattttgtaacagtgttgggaagtattactgat
attttagtaacagagattgcggacacggacaacttcatcaacctcagcttcctgcggctc
ttccgggcagccaggctcatcaagctcctccgccagggctacaccatccgcatcctgctc
tggacgttcgtgcagtccttcaaggccttgccttatgtgtgtctcctcattgcaatgctc
ttcttcatctatgccattattggcatgcaggtatttgggaacattgccttagatgatgaa
acctccattaatcggcacaacaacttccggaccttcctccaagccctgatgctcctcttc
aggagtgctacgggggaagcctggcacgagatcatgttgtcctgcttgagcaacagagcc
tgtgaccccctctctggcctcaccaaaaaggaatgtggcagtgattttgcctatttctac
ttcgtgtcattcattttcctctgctccttcctgaggccagacaaaatcaagggaataaaa
agcacttctatttattgggggccttcagatctctgttttcttgtctgccttcccttctct
ctgccctccttttcatttgctccactgtgttgcctctcccccaccccctccccgttctcc
tctcctcaatccggttggattcctgtgtcctggtgcttttgcctccatccctgtggtccc
agcgggcgcatcagttacacagacatgtatgagatgctgagacacatgtccccacctcta
ggccttgggaagaaatgcccagctcgtgttgcctataagcgcctggtgaggatgaacatg
cccatctctcccgaggatttaaccgtgcacttcacctccacgctgatggccctgatccga
acagccctggagatcaaactggcctcaggaggtgtgaagcagcaccagtgtgatgctgag
ctgaggaaggagatctctctggtctggcccaacctgtcccagaagactctggatttgctg
gtgcctcctcacaaacctgatgagatgactgtggggaaggtctatgcagccctgatgata
tttgacttctacaagcagaataagaacagcagggagcaagtccagccccctgggggcctg
tgccagcccgggccagtgtccctgttccaccccctgaaggccaccctggagcagagccag
cccacgagcttcagcaacgccaaggctttcctgcgccagaagagctcggcctccctcaac
aacgggggagccctgccacccccagagggagggatcaaagagtccagttcttgggggacc
cagcgcacccaggacgtgttttatgaaaccaggagcccagcctttgagcgaggccactcc
gaggagatccccattgagagggtggtggaaatgaaggagatcagccccacagttgccaac
ggagagccccagccaggcctggagagccagggccgggcagcctccatgcctcgcctggct
gctgaaacccagcccatcccggacaccagccccatgaagcgctcggtctccacgctggcc
ccgcagcgccctcacgccatgcacctctacgagtactccctggagaggatgcctccggag
cagggccaccaccaccaccaccaccgctgccaccggcgcaaggagaagaagcagaagtcc
ttggatagggccgcccatcacctgcctgatggacaagctgtaggccagtctggagagtct
tcttccaaggacaagaagcaggagcgtggccgctcccaggagaggaagcagcactcctcc
tcctcctccgaaaagcagcgcttctactcctgcgaccgctacggcagccgggaccgcgcc
cagcccaaatctgctgagcagagcaggcccacctcccccaacgggggcccagagcacggc
ccgcacagacagggcagtggttcagttaatgggagccccttgctgtcgacatctggtgct
aataccccctgccggggtcggaggcagctcccacagactccactgaccccacgccccagc
atcacttacaagaccgctaactcctcgcccgtgcacttcgccacgttccaaacccccccg
ttctccccgggccgcctgagccgcgggctgtccgagcacaacgcgctgctgcggggcgac
cccccccccccccccccccccccccgcgacgccgccgccgccagcccgcagcgcgccgcg
cacgaggacgcgctcaccttcgaggaggccgtggccaccaactcgggccgctcctcgagg
acttcctacgtctcctcgctgacctcgcagccgcaccaaacccgccgcgtgcccaacggg
taccactacacgctggggctcagcgcgggccccggcgcccgaggacgcagttactaccac
gaggccgatgaggatgactggtgctag
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integrated database retrieval system
