Ficedula albicollis (collared flycatcher): 101812497
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Entry
101812497 CDS
T02815
Symbol
NRXN1
Name
(RefSeq) neurexin 1
KO
K07377
neurexin
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101812497 (NRXN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fab04131
]
101812497 (NRXN1)
Membrane trafficking [BR:
fab04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
101812497 (NRXN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
EGF_2
Motif
Other DBs
NCBI-GeneID:
101812497
NCBI-ProteinID:
XP_005043015
LinkDB
All DBs
Position
3:12971861..13681812
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AA seq
1505 aa
AA seq
DB search
MGAVLVRRGGCLLLWLALLLGCWAELGSGLEFPGAEGQWTRFPKWNACCESEMSFNMKTR
SSSGLVLYFDDEGFCDFLELILTHGGRLQLSFSIFCAEPATLLSDTAVNDNLWHAVVIRR
HFKNTTLIIDRAEAKWVEVKSKRRDMTVFSGLFLGGLPPELRSATLKLTLSSVKDREPFK
GWITDVRVNYTQASPLESQEVRLDDEQSRLCARDDVCLNGGVCSVLNDQAVCDCSQTGFR
GKDCSEEDNYVEGLAHLMMGDQGKSKGKEEYIATFKGSEYFCYDLSQNPIQSSSDEITLS
FKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVK
VTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVS
NNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITFETPESFI
SLPKWNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKHPQMVKVDFFAIEMLDGHLY
LLLDMGSGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVNTLRTPYTAPGESEILDLDD
DLYLGGLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEIQSTAGVKPS
CSRETAKPCLSNPCKNNGVCRDGWNRYVCDCSGTGYLGRSCEREATILSYDGSMFMKIQL
PVVMHTEAEDVSLRFRSQRAYGILMATTSRESADTLRLELDAGRVKLTVNLDCIRINCNS
SKGPETLFAGYNLNDNEWHTVRVVRRGKGLKLMVDDQQAVTGQMAGDHTRLEFHNIETGI
ITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIADPVTFKT
KASYVALATLQAYTSMHLFFQFKTTSLDGLILFNSGDGNDFIVVELVKGYLHYVFDLGNG
ANLIKGSSNKPLNDNQWHNVMISRDTNNLHTVKIDTKITTQSTAGARNLDLKSDLYIGGV
AKEMFKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEVALMKADLQG
PSTTCQEDSCANQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYTWPPN
DRPSTRADRLAIGFSTVQKEAVLVRVDSSTGLGDYLELHIHQGKIGVKFNVGTDDIAIEE
MNAIINDGKYHVVRFTRSGGNATLQVDNWPVIERYPAGNNDNERLAIARQRIPYRLGRVV
DEWLLDKGRQLTIFNSQATIKIGGKERGHPFQGQLSGLYYNGLKVLNMAAENDANIVIEG
NVRLVGEVPSSMTTESTATAMQSEMSTSVMETTTTLATSTARRGKAPTKEPIGQATDDIL
VASAECPSDDEDIDPCEPSSGGLANPTRAGGGREYPGSSEVIRESSSTTGMVVGIVAAAA
LCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVIKEKQPNSAKSSNKNKKNKD
KEYYV
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgggggcggtgctggtgcggcgcgggggctgcctgctgctctggctggccctgctgctg
ggctgctgggctgagctgggcagcgggctggagttcccgggtgcggagggccagtggacc
cgcttccccaagtggaacgcctgctgcgagagcgaaatgagcttcaacatgaagacgcgc
agctccagcgggctggtgctctactttgatgacgagggtttctgtgacttcctggagctc
atcctcacccacggagggcggctacagctcagcttctccatcttctgcgccgagcctgcc
accctactctcggacacggcggtcaacgacaacctctggcacgctgtggtcatccgccgc
cacttcaagaacacgacgctgatcatcgaccgagccgaggccaagtgggtggaggtgaag
tccaagcggcgggacatgactgtcttcagcggcctcttcctaggaggactcccgccggag
ctgcggtcggcgacactaaagctgacgctctcctccgtcaaggaccgggagcccttcaag
ggctggataacagacgtgcgggtgaactacacgcaggcctcgccgctggagagccaggag
gtgcggctggatgacgagcagagccggctgtgcgcccgggacgacgtctgcctcaacggg
ggcgtctgctcggtgctcaacgaccaggccgtctgcgactgctcccaaacgggcttccga
gggaaagactgcagcgaagaagacaactatgtggaaggtctggcgcacctgatgatgggc
gaccaaggtaaaagtaaaggaaaagaagaatatattgcgacattcaagggatcagaatac
ttctgctatgatttatctcagaaccccatacagagtagcagtgatgaaataactctgtca
tttaaaacacttcagaggaacggactgatgcttcacacaggaaaatcggctgattatgtc
aatcttgcactgaaaaatggagctgtctccttggtcattaatttgggctcaggggccttt
gaagcactggtggaacctgtgaatgggaaatttaatgacaatgcctggcatgatgtgaaa
gtaaccaggaatctgcgtcagcactcaggcattggacacgctatggtgacaatatcagtg
gatggaattctgaccacaacgggatacacgcaagaagactacaccatgctgggctctgat
gactttttctatgttggaggcagtcctagcacagcagacctcccagggtcaccagtcagt
aacaactttatgggctgtctcaaagaggttgtatataaaaataacgatgtcaggttggag
ctgtctcgacttgccaagcaaggggatcctaaaatgaagattcatggggttgtagcattt
aaatgtgagaatgttgcaaccttagatccaatcacatttgaaacaccagagtctttcatc
tctctgccaaagtggaatgccaagaaaacaggctcaatatcatttgactttcgtacaact
gagccaaatggcctgattcttttcagtcatgggaaaccaaggcaccaaaaagatgccaaa
catccacagatggtgaaggttgatttttttgccattgagatgcttgatggccacctctac
ctactattagacatgggatcaggtactataaaaataaaagccttgcagaagaaggtgaat
gatggtgaatggtaccatgtggattttcagcgggatgggcggtcagggacgatatctgtg
aacacgttacgtactccatatactgcaccaggggagagtgaaatccttgacttggatgat
gacttgtatcttggaggcttaccagaaaataaagcaggcctggtcttcccaaccgaagtg
tggacagcactcctcaattatggatatgttggctgcattagagatttatttattgatggc
caaagcaaagatattcgacagatggctgaaattcaaagcacagctggagtaaaaccctca
tgctcaagagaaactgcaaaaccttgccttagcaacccctgtaaaaacaatggtgtatgc
agggatgggtggaacagatatgtgtgtgattgctctggcacggggtatcttggcagatcg
tgcgaaagagaggcaacaattttaagctatgacggaagtatgtttatgaaaatacagctt
cctgttgtgatgcacacagaggccgaagatgtttctttaaggttcaggtctcagcgggct
tatggcattttaatggcgacaacttccagggaatctgcagatacccttcggttagagctg
gatgcaggacgagttaagctaacggtcaacctagactgtatcaggattaactgtaattcc
agcaaaggcccagaaaccctttttgctggctataacctcaatgataatgagtggcacaca
gtgcgtgtggtgcggcgaggaaaaggtttaaagttaatggtggatgaccagcaggctgtg
acaggtcaaatggctggcgatcacacacgactggaattccacaacatagaaacaggaata
ataacagaacggcgctacctgtcttctgtgccttctaattttattgggcatctacagagt
ctcacatttaatggcatggcatacattgacttatgtaaaaacggagacatcgattattgt
gagctaaatgcaagattcgggttcaggaacatcatagcagaccctgtaacctttaaaaca
aaagcaagttatgttgcactggccacactgcaagcgtacacatctatgcacctttttttc
cagttcaaaaccacctccctggatggattgatactttttaacagtggcgatggaaatgat
ttcattgtggttgaattagtgaaagggtatttacactatgtgtttgacttgggaaacggt
gccaacctcatcaagggaagttccaataagcctctgaatgacaaccagtggcataatgtc
atgatatcaagggataccaacaacctacacactgtaaagattgacactaaaatcacaaca
cagagcacagcaggagccaggaatttagatctcaaaagtgatttatatattggaggagtg
gccaaagaaatgtttaaatccttgcccaaactggtgcatgcaaaggagggattccaaggc
tgccttgcatcagttgacttgaacggacggctccctgatctcatctcagatgctctcttc
tgcaatgggcaaatagaaagaggatgtgaagttgcattgatgaaagctgatttgcaaggc
cccagcacaacgtgccaagaggattcctgtgcaaaccagggcgtgtgcttacagcagtgg
gatggattcagctgtgactgtagcatgacctcctttagtggaccattatgcaatgacccg
gggacaacgtacatctttagcaaaggtggtggacaaatcacttacacgtggcctcccaac
gacaggccgagcacccgggcagacagactggccatagggtttagcactgtgcagaaagag
gctgtgctggtgcgagtggacagttctactggccttggggattatctagagctgcacatc
caccaggggaaaattggagttaaatttaatgttgggacagatgacatcgccatcgaagag
atgaacgccatcattaacgatgggaagtaccacgtggttcgcttcaccaggagcggtggc
aatgccaccctgcaggtggacaactggcccgtcatcgagcgttacccagcaggaaacaat
gataacgagcgcctggcgattgctagacagcgaattccatatcgacttggtcgagtagtt
gatgaatggctactcgacaaagggcgtcagctcacaatcttcaatagccaagcaaccata
aaaattggaggcaaggaacgaggccaccctttccaaggccagctctctggtctttactac
aatggcttgaaagttctgaatatggcagcagaaaacgatgccaacatcgtgatagaagga
aatgtgagacttgttggtgaagtgccttcctctatgacaaccgagtccacagccactgcg
atgcagtcagagatgtccacttcagtcatggaaacaactaccacgttggccacgagcacc
gccagaagaggaaaggctccgaccaaagaacccattggtcaggctacagatgacatcctg
gtggcctcggctgaatgtcctagcgatgacgaggacattgatccctgtgagccgagctca
ggtgggttagcaaaccctaccagggcaggaggaggaagggagtaccccggctcgtccgag
gtgatccgcgaatccagcagcacgacgggcatggtggtggggatcgtggcggcggcggcg
ctgtgcatcctcatcctcctgtacgccatgtacaagtacaggaaccgagacgaaggctcc
taccacgtggacgagagcagaaactacatcagtaactcagcacaatccaacggggctgtg
atcaaggagaaacagcccaacagcgctaaaagttccaacaaaaacaagaaaaataaggat
aaggagtactatgtctga
DBGET
integrated database retrieval system
