Ficedula albicollis (collared flycatcher): 101812569
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Entry
101812569 CDS
T02815
Symbol
LRP4
Name
(RefSeq) LDL receptor related protein 4
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fab04131
]
101812569 (LRP4)
Membrane trafficking [BR:
fab04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
101812569 (LRP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
SGL
Vgb_lyase
cEGF
DUF5050
EGF_LRP2
EGF_CA
EGF_3
EGF
Motif
Other DBs
NCBI-GeneID:
101812569
NCBI-ProteinID:
XP_016154393
LinkDB
All DBs
Position
5:24165179..24231597
Genome browser
AA seq
1934 aa
AA seq
DB search
MVGTTPASLIISDKSMAAFRKLAPRIPARPSSGAMESLQNIFFFFSFFAGVASSTECSCG
RNHFTCAVSAFGECTCIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRRSW
VCDGDNDCEDDSDEQDCPPRECEEDEFSCQNGYCIRSLWHCDGDNDCGDNSDEQCDMRKC
SEKEFRCSDGSCIAEHWFCDGDTDCKDGSDEENCPSDVPAATCSLEEFQCAYGRCILDIY
HCDGDDDCGDWSDESDCSSHQPCRSGEFMCNSGLCINAGWRCDGDFDCDDQSDERNCTTS
MCTADQFRCKSGRCVRLSWRCDGEDDCSDNSDEENCENTGTPQCAPDQFLCGNGRCIGQR
KLCNGANDCGDGSDESPHQNCRPRTGEENCNVNNGGCAQKCQMVRGMVQCTCHTGYRLLE
DGRSCQDVNECAEEGYCSQGCTNSEGGFQCWCEQGYELRPDKRSCKALGPEPVLLFANRI
DIRQVLPHRSEYTLLLNNLENAIALDFHHSKELVFWSDVTLDRIMRANLNGSNVEEVVST
GLESPGGLAIDWIHDKLYWTDSGTSRIEVANLDGTHRKVLLWQNLEKPRAIALHPMEGTI
YWTDWGNTPRIEYSNMDGSNRRIIADTHLFWPNGLTIDYAGHRMYWVDAKHHVIERADLD
GRNRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIH
TLHPQRQPAGRNRCGDNNGGCTHLCLPSSKGYTCACPTGFRKTSSHACAQSLDKFLLFAR
RMDIRRISFDTDDLSDDVIPLADVRSAVALDWDSKDDYVYWTDVSTDSISRAKWDGSNQE
VVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVSNTDGTMRTVLIWENLDRPRDIVVDP
VGGFMYWTDWGANPKIERAGMDASNRLVIISSNLTWPNGLAIDYESQRLYWADAGMKTIE
YASLDGRHRKVLIGNNLPHPFGLTLYGERIYWTDWQAKSIQSADRRTGQSRETLQDNLEN
LMDIHVFHRHRPPVHTACEVNNGGCSHLCLLAPLPKGYSCTCPTGINLLSDGKTCSSGMT
SFLIFARRTDIRMVSLDIPYFADVVVSVNVTMKNTIAIGVDPHEGKVYWSDSTLRKISRA
ALDGSQFEDIITTGLLTTDGLAVDAVGRKIYWTDTGTNRIEVGNLDGSMRKVLIWQNLDS
PRAIALYHEMGYMYWTDWGENAKLERSGMDGSGRVVLISNNLGWPNGLAVDKAASQLLWA
DAHTERIEAADLNGANRRTLLSPVQHPYGLTLLDSYIYWTDWQTRSIHRADKDTGANVIL
VRANLPGLMDIQAVDRARPLGFNKCGVRNGGCSHLCLPHPTGFSCACPTGIQLKRDEQTC
DSSPETYLLFSSRASIRRISLDTSDHTDVHIPVPELNNVISLDYDSVDGKIYYTDVFLDV
IRRADLNGSNMETVIGQGLKTTDGLAVDWVARNLYWTDTGRNTIEVARLDGSSRKVLINN
SLDEPRAIAVFPKKGYLFWTDWGHIAKIERANLDGSERKILINTDLGWPNGLTLDYDTRR
IYWVDAHLDRIESCDLNGKLRQVLVSQVSHPFALTQQDRWIYWTDWQTKSIQRVDKYSGR
NKETVLANVEGLMDIIVVSPQRQTGSNACGVNNGGCTHLCFARASDFVCACPDEPDGRPC
STIPGVVPLGPEPTSVNERSQTPPGRLGTSTIKPLTSLETVEGNCSDKDARQGLCTRANE
AVLATMGEGLHVSYIIGGLLSILFILLLIAALIIYRHNKSKFTDPGLGNLTYSNPSYRTS
TQEVKIESIPKPTMYNQLCYKKETGPDHSYTKEKIKIVEGICLLSSDDSEWDDLKQIRSS
RGGILRDHVCMKTDTVSIQASSGSLDDTETEQLLQEEQSECSSVNTAAATPERRGSLPDT
GWKHQRKPSTESEV
NT seq
5805 nt
NT seq
+upstream
nt +downstream
nt
atggtgggaacgactccggcctcacttatcatcagtgacaaatcaatggcagccttcaga
aagctggcccccaggatccccgctcggcccagctctggagcaatggaatctcttcaaaac
atctttttctttttttctttctttgcaggtgttgcaagtagcactgagtgctcctgtgga
cgtaatcattttacctgtgctgtcagtgcttttggtgaatgcacgtgcatccctgctcag
tggcaatgtgatggagacaatgactgtggggaccacagtgatgaagatggctgcatgctg
cccacttgctcccccttggacttccactgtgacaatggaaagtgtatccgccggtcatgg
gtctgcgatggagacaatgactgcgaggatgactctgatgagcaggactgccctccaagg
gagtgtgaggaagatgagttctcatgtcagaatggatactgcattcgcagcttgtggcac
tgtgatggtgacaatgactgtggggacaacagtgatgagcagtgtgatatgagaaagtgc
tcagagaaggagttccgttgcagcgatggcagctgcatagctgagcactggttctgcgac
ggggacacagactgcaaggatggctcagatgaagagaactgcccatcagatgttccagct
gccacctgcagcttggaggagttccagtgtgcatatggacgctgcatcttggacatctac
cactgtgatggtgatgatgactgtggggactggtctgatgaatctgactgctcatctcac
cagccttgtcgctctggagagttcatgtgcaacagtggcttgtgcattaatgctggctgg
aggtgtgatggcgacttcgactgtgatgaccagtcagatgagaggaactgcactacatct
atgtgcacagctgatcagttccgctgcaagtcgggtcgctgtgtccgtctgtcctggcgt
tgtgatggggaagatgactgctctgacaacagtgatgaggagaactgtgagaacacaggc
acccctcagtgtgccccagaccagttcttgtgtgggaatgggcgttgtatcggccagagg
aagctgtgcaatggagcaaacgattgtggagatggcagtgatgagagcccacatcaaaac
tgccgtccacgaacaggggaggagaattgcaatgtcaacaatggtggctgtgctcagaag
tgccagatggtacgagggatggtacagtgcacttgccacactggttacaggctcctggaa
gatggccgatcatgccaagatgtgaatgagtgtgctgaggaaggctactgcagccaaggc
tgtaccaacagtgaaggaggcttccagtgctggtgtgagcaaggctacgagctgcgacct
gacaaacgtagctgcaaagctctagggccagagcccgtgctgctctttgccaatcgaatt
gatatccgtcaagtgttgcctcatcgctctgagtatacgctgctcctgaacaacctggaa
aatgccattgcccttgacttccaccacagcaaggagctggtgttctggtctgatgtcaca
cttgatcgcatcatgagggccaatctgaatgggagcaatgtggaagaggtggtttccaca
gggctggagagcccaggtggacttgctattgattggatccatgacaaattatactggact
gactctgggacatcgcgtattgaagtagcaaacttggatggcactcacaggaaagtgctt
ttgtggcagaacctggagaagccccgagcaattgctctacatcctatggagggtactatc
tactggactgactggggcaacactccccgcattgagtattccaacatggatggctctaat
cggcgcatcattgcggatacgcacctcttctggcccaatggactgaccattgactatgca
ggacatcgaatgtactgggtggatgccaaacatcatgtcattgagagggctgaccttgat
ggacgcaataggaaggctgttattagccaagggctcccacacccatttgctatcacggtg
tttgaggacagtctgtactggacagactggcacaccaagagcatcaacagtgccaacaaa
tttacaggcaagaaccaggagatcatccgcaacaagctccacttccctatggacatccac
acgctgcatcctcagcgtcagccagcagggagaaaccgttgtggggacaacaacggaggc
tgcactcacctgtgcctgccgagcagcaagggttacacctgcgcctgccccacgggcttc
cgcaagaccagcagccatgcctgtgcccagagtcttgacaagttcctgctttttgcccga
aggatggacatccgtcggatcagctttgacacagatgacctgtcagatgacgtcatcccc
cttgcagatgttcgcagtgctgtggctctagactgggactcaaaggatgactatgtctac
tggacagatgttagcactgactcaatcagccgagcaaaatgggatggatcgaaccaggag
gttgtggtggacaccagcctggaaagtccagctggacttgcaattgactgggtcaccaac
aaactgtactggactgatgcaggaacagatcggatagaggtctccaatacagatgggacc
atgagaactgttctaatctgggagaatctagatagacctagagatattgtggtggaccct
gttggagggttcatgtactggactgattggggagctaacccaaaaattgaacgtgctggg
atggatgcctcaaaccgcttggtgatcatttcctccaacctgacatggcccaatggcttg
gccattgactacgagtcacagcgcttgtattgggcagacgcaggcatgaagaccatcgag
tatgccagtctggatggaaggcacaggaaggtgctgattgggaacaatctgcctcacccc
tttggacttactctttatggcgagagaatctactggacagactggcaggcaaaaagcatc
cagagtgcagacaggaggactgggcagtctcgggaaacactgcaggacaatctggagaat
cttatggatattcatgttttccaccggcacaggccaccagtacacacagcatgtgaagtt
aacaatggaggctgcagtcacctgtgccttttggcacctcttccaaaaggttacagctgt
acttgccctacagggatcaacctgctatctgatggcaagacctgctcctctggaatgacc
agctttctgatttttgctagaaggactgatatccggatggtctctctggatatcccctac
tttgcagatgttgttgtctcagtcaatgtcaccatgaagaacaccattgcaattggagtg
gatcctcatgaaggaaaggtttactggtcagacagcacattgcggaaaatcagtcgtgct
gcccttgatggctcacagtttgaggacatcatcactacaggtctgttgactacagatggg
ctggctgtggatgctgtcggcaggaagatatattggacagatacaggaacaaaccggatt
gaagtgggcaacctcgatggctccatgaggaaagtcttgatctggcagaacctggacagc
cctcgggcaatagctttataccatgaaatggggtatatgtactggacagactggggtgag
aatgccaagctggaacgctctgggatggatggctctggacgtgtggtgttgatcagcaac
aacttgggctggcctaatggactggcagtggataaggctgcgtcccagctgctctgggct
gatgcacacactgagcggatcgaggctgcggatctcaatggcgcgaaccgccgcaccctg
ctgtctccagtgcaacatccctatggcctcactttgctggattcttacatctactggact
gactggcaaactcgcagcattcacagggctgacaaggacactggtgctaatgtcatcttg
gtgagggcaaacctgcctggcctcatggatatccaagctgttgacagagcacggcccctg
ggcttcaataaatgtggagttcgtaatggtggctgctcccacctttgcttgcctcacccc
actggtttctcctgtgcctgccccactggcatccagctgaagagagatgagcagacatgt
gactcttctccagagacctacctacttttctctagccgtgcttccatccgtcgtatctca
ctggacaccagtgaccacacagatgtgcacatacctgtccctgagctgaacaatgtcatt
tctctggactatgatagtgtggatggcaagatttactacacagatgtatttcttgatgtt
atcaggcgggctgatctgaatggcagcaacatggaaactgttattggtcagggtttgaag
actacagatggcctggcagtggactgggttgccaggaacctctactggacagacacagga
cgcaataccatcgaagtggctagactggatggaagctccaggaaagtgctgatcaataac
agcctggatgaacctcgagccattgctgtctttcccaagaaggggtatctcttctggaca
gattggggtcacattgctaaaattgaacgggcaaacttggatggctctgaacgtaaaatc
ctgattaacactgacctagggtggcccaatggattgactttggattatgacaccaggagg
atatactgggtggatgcacacctcgatcgcatagagagttgtgacctcaatgggaagcta
cggcaagtgttggtcagccaggtgtcacatccctttgctctgacacagcaggacagatgg
atatactggactgactggcaaacgaaatctatccagagagtggacaaatattctggacgg
aacaaagagacagtcctagccaatgttgagggattgatggatatcattgtggtttctcct
cagagacagacaggtagtaatgcttgtggagtgaacaatggaggctgcactcacctctgc
tttgccagggcttctgactttgtctgtgcatgtccagatgaaccagatgggcggccctgt
tctacaattcctggtgtggtgccccttggtccggaaccaaccagtgtaaatgagagaagc
caaacaccacctggcagactaggtacttcaacaatcaaacctctcacatctctggaaaca
gtggaaggaaactgctctgacaaagatgctaggcaaggcttgtgtactcgtgccaacgag
gcagtgttggccaccatgggagaaggactgcacgtcagctacattattggaggtcttctc
agcatcttgtttattttgttgcttattgctgctttaattatatataggcataataagtcc
aagtttacggaccctggcttggggaacctaacctacagtaatccttcatatcgaacatct
acccaagaggtgaagattgaatcgattcccaaaccaaccatgtacaaccagctgtgctac
aagaaagagactggtcctgaccacagctacactaaggagaagatcaagattgtggaggga
atatgccttttatccagtgatgattccgaatgggatgacctgaagcagattcggagctcc
cgtggagggatcctccgggaccacgtctgcatgaagacagatacagtctctatccaggct
agctctggttcactggatgacaccgaaactgagcagctgctacaggaagaacagtctgaa
tgcagcagtgttaacacagcagcagccactcctgagcggcggggctcactcccggacaca
ggctggaaacaccaacgcaagccctccacagagagcgaggtctaa
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