Ficedula albicollis (collared flycatcher): 101812781
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Entry
101812781 CDS
T02815
Symbol
GRIN2C
Name
(RefSeq) glutamate ionotropic receptor NMDA type subunit 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04020
Calcium signaling pathway
fab04080
Neuroactive ligand-receptor interaction
fab04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
101812781 (GRIN2C)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101812781 (GRIN2C)
04082 Neuroactive ligand signaling
101812781 (GRIN2C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
fab04040
]
101812781 (GRIN2C)
Ion channels [BR:
fab04040
]
Ligand-gated channels
Glutamate (ionotropic)
101812781 (GRIN2C)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
NMDAR2_C
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
101812781
NCBI-ProteinID:
XP_005056158
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All DBs
Position
18:6220608..6236061
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AA seq
1377 aa
AA seq
DB search
MGRAPAHTLLLWMVLGCSAAFTDILLPGPEEPVVNVAVVFGGTSYPLHIRSRLSPQSFLD
MPLEIHPITVVVNNTNPSTLLTQICDILASHKIHGIVFEDNVGTEAVAQILDFISSQTQV
PIISISGGSAVVLTPKEPGSAFLQLGVSIEQQIQVIFKVLEEYDWGSFAVITSLYPGYNI
FLDVIRSFTDASYFGWELQEVLTFEMSQEQGSSRTQRLLRQIDAQVLIVYCSREEAEYLF
SMAEQAGLVGPGYIWIVPSMTVGNMEVPPSSFPVGLISVVTESWKLSLRQKVRDGVAIIA
MGAASFFRAHGYLPEVGRDCWAPARATTTNTSFYRHLLNVTWEHKDFSFNEGGYLIRPTM
VVITLNQHRLWEMVGKWEKGIIHMKYPVWPRYGAFMQPVVDNRHLTVATLEERPFVIVEN
TDPSTGVCVRNTVPCRKQTNSSHSGDGLVDPYTKLCCKGFCIDILKKLAKTVKFSYDLYL
VTNGKHGKIVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVAR
SNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYFSPVGYNQNLTSGKRPGGPSF
TIGKSIWLLWALVFNNSVPIENPKGTTSKIMVLIWAFFAVIFLASYTANLAAFMIQEQYI
DTVSGLSDRKFQRPQEQYPPFRFGTVPNGSTERNIRSNYPDMHTHMVKYNQRTVEDALTS
LKMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSRWKRAIDLAL
LQFLGDGDTQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEH
LIYWKLRHSVRKSHKLDFLLAISRGIYSCFNGVQTLSSPGRAPRPDVTASSAQANVLKML
QAAKEMVQTASVGGSLEQATRTIEDWSNHSERLQTTFSLRTPQLVVQNSTGAHRGPPSSP
HPAERLGRAYAAKGAPLGLPLPQPIPVDPRLHGEENWRGENEYPRLIHPLKFRGGCVGDE
ALTNFPHLLVKTSPGGDYGEQMLVGNHIGAPLPPPTSPRDLPPPDIYREHKRPSGRGERL
QNTPLLQRDGTHGGSGTLPRLLSAAEKKRELGSAFLPPSCSRGAFPRVTRTCRARAEPAR
PEAAAMEREKLSRWASSARLPGERGDKRLPSYREACRQNPRATATVPACAPRACMNSYAN
LPLYARPLWRGSPPPRERPGPHRCERGSGRWDSACRDCGRRGEPAVLRADRRDPPLARGA
GIGDAKCTAAVSPSRFGFIQRTRNAISSYDISLAGPIFTAPLLSIVRPILMRRGGTKEGS
IDQPLGRGSNGKDMLVLLWRDGDSDPSVMAIPSRNSCSVPKYEEERDGKRSQIKLDV
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atgggcagagcgccggcacacactctgctactgtggatggtgctgggctgctcggctgcc
ttcacggacatcctgctgccgggccctgaggagccagtggtcaacgtggccgtggtgttc
gggggcacgtcctaccccctgcacatccgctcccgcctgagcccccagagcttcctggac
atgcccctggagatccaccccatcactgttgtcgtcaacaacaccaaccccagcaccctc
ctcacccagatctgcgacatcctcgccagccacaagatccacggcatcgtctttgaggac
aacgtgggcacggaggccgtggcccagatccttgacttcatctcctcccagacacaggtc
cctatcatcagcatcagtggcgggtctgcagtggtcctgaccccaaaggagcccggatca
gctttcctgcagttgggtgtctccatcgagcagcaaatccaggtgatcttcaaggtgttg
gaggaatacgactggggctccttcgctgtcatcaccagcctctacccaggctacaacatc
ttcctggatgtcatccgctccttcacggacgccagctacttcggctgggagctgcaggag
gtgctcaccttcgagatgagccaggagcagggcagctccaggacgcagcggctcctgcgc
cagatcgatgcccaggtcctcatcgtttactgctcccgagaggaggccgagtatctcttc
tccatggcggagcaagccgggctggtggggccaggatacatctggatcgtgcccagcatg
accgtgggcaacatggaggtgccaccctcctccttccccgtgggcctcatcagcgtggtg
acagagagctggaagctgagcctgcggcagaaggtgcgggatggcgtggccatcattgcc
atgggggcagccagcttcttccgtgcccatggctacctcccagaggtggggagggactgc
tgggcccccgccagggccaccaccaccaacacgagcttctaccggcacctcctcaatgtg
acgtgggagcacaaggacttctccttcaatgaaggtggctacctgatcaggcccaccatg
gtggtgatcacgctcaaccagcaccggctctgggagatggtgggcaagtgggagaagggc
atcatccacatgaagtacccggtgtggccccgctacggcgccttcatgcagcccgtggtg
gacaaccggcacctgacagtggctaccctggaggagagaccctttgtcatcgtggagaac
acggaccccagcacgggggtgtgcgtgcgcaacaccgtgccctgccgcaagcagaccaac
tcctcccacagtggtgatggccttgtggatccctacaccaagctgtgctgcaaaggtttc
tgcattgacatcctgaagaagctggccaagacggtgaagttctcctacgacctctacctg
gtgaccaatggcaaacatggcaagattgtccgtggggtctggaacggcatgattggtgag
gtgtactacaagcgtgcagacatggccatcggctccctcaccatcaacgaggagcggtct
gagatcgtggatttctccgtgccctttgtggagacaggcatcagtgtcatggtggcccgg
agcaacggcaccgtgtccccctctgccttcctggagccttacagcccagccgtgtgggtc
atgatgtttgtcatgtgcctcactgtggtggccatcaccgtctttgtgttcgagtatttc
agccccgttggttacaaccagaacctcaccagtggcaagaggccggggggtccctccttc
accatcggcaagtccatctggctgctgtgggctctggtcttcaacaactcagtccccatc
gagaaccccaagggcaccactagcaagatcatggtgctcatctgggccttcttcgccgtc
atcttcctcgccagctacacggccaacctggctgccttcatgatccaggagcagtacatt
gacactgtgtcggggctgagtgacaggaagttccagaggccacaggagcagtacccaccg
ttccgcttcggcactgtccccaacggcagcaccgagaggaacatccgcagcaactacccc
gacatgcatacccacatggtgaagtacaaccagcgcactgtggaggatgccctcaccagc
ctcaaaatggggaagctggatgccttcatctacgacgcggcggtgctgaactacatggcg
ggcaaggacgagggctgcaagctggtgaccatcggcagcgggaaggtgtttgccaccacg
ggctacggcatcgccctgcagaaggactcgcgctggaagcgggccattgacctggccctg
ctccagttcctgggagatggtgacacccagaagctggagacagtttggctgtcagggatc
tgccagaatgagaagaatgaggtgatgagcagcaagctggacatcgacaacatggctggg
gttttctacatgctgctggtggccatggggctgagcctgctggtcttcgcctgggagcac
ctcatctactggaagctgcgtcattccgtccgcaagtcccacaagcttgactttctcctg
gccatcagcaggggcatctacagctgcttcaatggggtgcagaccctgtcgagccctggg
cgggcacccagacccgatgtcactgccagctcagcccaggccaatgtgctgaaaatgctg
caggcggccaaagagatggtgcagacggccagcgtgggcggctcgctggagcaggccacc
cgcaccatcgaggactggagcaaccacagcgagcgcctccagaccaccttctcgctgagg
acaccccagctcgtggtgcagaacagcaccggcgcacaccgggggcccccctccagcccg
caccccgccgagaggctggggagagcctacgctgccaagggtgctcccctggggctgccg
ctgccccagcccatccctgtggacccccgtctgcacggggaggagaactggagaggggaa
aacgagtacccccgcctgattcaccccctgaagtttcggggtggctgtgtaggggatgaa
gccctcacaaatttcccccacctcctggtgaagacttctccaggaggggattatggggag
cagatgctggtggggaaccatatcggggctcccctcccgccccccacatcccccagggac
ctcccaccgccggacatctacagggagcacaagcggccgtcgggacggggggagcggctg
cagaacaccccgctgctccagagggacggcacgcacggcggctcggggaccctgccccgg
ctgctctcggcagcggagaagaagcgggagctgggcagcgccttcctgcctccatcctgc
tctcgcggagccttccccagagtcaccaggacttgcagagccagggccgagccggcgcgg
ccggaggcggcggcgatggagcgggagaagctgagccgatgggcgagctcggccaggctg
cccggggagcgcggcgacaagcggctgccgtcctaccgggaggcctgccggcaaaatccc
cgtgccaccgccaccgtgccggcgtgcgccccccgcgcctgcatgaactcctacgccaac
ctgcccctctacgccagacccctgtggcgggggtccccgccgccccgggagcgccccggg
ccgcaccgctgcgagcggggctccgggcgctgggacagcgcctgcagagactgcgggagg
cgcggggagcccgccgtgctgcgggcggacaggagggacccgccgctggcccgcggggct
ggtatcggggacgccaaatgcaccgccgccgtttcgccgtcacgttttggtttcattcaa
aggactcgaaacgccatttccagctatgacatctccttagcaggtcctattttcactgcc
ccattgctcagcattgtaagacccatcctgatgaggagagggggaacaaaggagggcagc
atagatcagccactgggaaggggttccaatggcaaggacatgctggtgctgctttggaga
gatggtgactcagacccatccgtcatggccatcccctccaggaatagctgctccgtgcct
aagtacgaggaagaaagggatggaaaaagaagtcagatcaaactagatgtataa
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