Ficedula albicollis (collared flycatcher): 101812808
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Entry
101812808 CDS
T02815
Symbol
TNRC6B
Name
(RefSeq) trinucleotide repeat containing 6B
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fab03019
]
101812808 (TNRC6B)
03036 Chromosome and associated proteins [BR:
fab03036
]
101812808 (TNRC6B)
Messenger RNA biogenesis [BR:
fab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101812808 (TNRC6B)
Chromosome and associated proteins [BR:
fab03036
]
Eukaryotic type
Gene silencing
piRNA pathway
101812808 (TNRC6B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
101812808
NCBI-ProteinID:
XP_005039770
LinkDB
All DBs
Position
1A:complement(50710549..50833860)
Genome browser
AA seq
1790 aa
AA seq
DB search
MEHEDFVMEGHGKTPPPGEENKQEKEQEREEQLMEDKKRKKEDKKKKDSAQKVTDQKTKV
PEVTKPSLSQPVAASPIGNSPSPPVNGGNNAKRVAVPNGQPPSAARYMPREVPPRFRCQQ
DHKVLLKRGQPPPPSCMLLGGGAGPPSPAAPGANPNNAQPVTGALLQSDSGTATDSAIGG
AAASNYANSTWGPGASSNSGTNANPTHIWDKVIVDGSDMEEWPCIASKDAESSSENTTDN
NSASNPGLEKNALPGSTTSNKGKGSQCQSGSAGNECNLGAWKSDPKAKSVQSSNPAAESN
NGLGNWRNLSGQDRISPGSGFSNFNPNSNPSAWPALVQEGNSRKGTLESDSGSSNAQIST
VGQTSREQQSKMENAGVNFVSGREQAQIHNTDGPKNGNTNSLNLSSPNPMENKGMPFEMG
LGNPSRSTDTPSQSTGERKTGSVGSWGTARGSSGTDTVSGQSNSGNHGNNGKDREDSWKG
ASVQKPNGSRSESWDNNNRSTGGGSWNFGPQHANESKWGEGNKLTSGVSQGEWKQLSGSD
ELKIGEWSGPNQPNSSTGAWDNQKGHPLPENQGNSQAPCWGRSSSSAGSEVGGQSTGSNH
KAGSSDSHNSGRRSYRPTHPDCQAVLQTLLSRTDLDPRVLSNTGWGQTQIKQDTVWDIEE
MPRPEGKSDKGTEGWESSATQTKNSGGWGDVPSQSNQNKSGWGELSTPTEWKDPKSTGGW
NDYKNSNSSNWGGGRQEEKSSSSWNDSSSKDQGWGGRQTNQGWSSGKNGWGEEVDQTKNS
NWESAGNKPVSGWGEGGQNEIGTWGNGANTSSASKGGWDDCKRTSTWNETGRQPNSWNKQ
QQQHQQQQQESSGSWGPPPQTPSNGRPPNPNWNNGPQPAAPKEEEPSGWEEPSPQSISRK
MDIDDGTSAWGDPSSYNYKNVNLWDKNSQGGQAPREQSLPTPMTSKSQASVWSKSTPPAP
DNGTSAWGEPNETSPGWGEVDDTGASTTGWGNAPSNAPNAMKSSSKSMQDGWGESDGPVT
GTRHSSWEEEEEGGVWNTAGSQGSSSSHNSTSWGQGGKKTQMKCALKGGNSDSWMNPLSK
QFSNMGLLSQTDDIPGSKMDLSVGGLPDKKFEVDKRAVNLGDFNDMMRKDRSGFRPPNSK
DMGTTDSGPYFEKGGNHGLFGNSTAQSRGMHTPVQPLNPSPNIRAQVPPQFLSPQVSASM
LKQFPNSGLNPGLFNMGPQLSPQQIAMLSQLPQIPQFQLACQLLLQQQQQQQLLQSQRKL
SQAVRQQQEQQIARMVSALQQQQQRQPGMKHSPSHPVGPKPHLDSMVPNPLNVGLSDLQT
KGQIPGYGSGGFGSSGMDYGMVGGKEAGTESRFKQWTMMEGLPSVASQDANMHKNGAIVP
PGKARGGSPYNQFDIIQGDPLSSHAGPAGDSWLPAKSPPTNKIGSKSSNASWPPEFQPGV
PWKGIQNIDPESDPYVTPGSVLGGTATSPIVDTDHQLLRDNTTGSNSSLNTSLPSPGAWP
YSASDNSFTNVHSTSAKFSDYKSTWSPDPIGHNPTHLSNKMWKNHISSRNTTGLPRPPPG
LTNPKPSSPWNSTAPRSVRGWGAQDSRLGSASTWSDGGSVRPSYWLVLHNLTPQIDGSTL
RTICMQHGPLLTFHLNLTQGTALIRYNTKQEAAKAQTALHMCVLGNTTILAEFATDEEVS
RFLAQAQPPTPAATPSAPAAGWQSLETGQNQTDPVGPALNLFGGSTGLGQWSSGGGGGSS
GGDLTGASLWGPPNYSSSLWGVPSVEDPHRMGSPAPLLPGDLLGGGSDSI
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atggaacatgaggattttgtaatggaggggcatggcaagactccacctcctggtgaagaa
aacaaacaagagaaggagcaagaaagggaagaacagttaatggaagacaagaaaaggaag
aaagaggataagaaaaagaaggactctgctcagaaggtcacagatcaaaaaaccaaagtg
cccgaagtgacgaaaccaagtttaagccaaccagtggctgccagcccaattggcaactct
ccatcgccaccagtcaatggtggcaacaatgccaaaagggtggcagtgccgaacggacaa
ccgccaagcgccgcccgctacatgcctcgggaggtgccgccgcgattccgttgccagcag
gaccacaaagtgttactgaaacgtgggcagcctcctccgccatcctgcatgctccttggg
ggtggagcagggcctccctccccagcagcaccaggagcaaacccaaacaacgcacaacca
gtgacaggagcactgctgcagagcgacagtgggactgcaacagattcagcaattggaggt
gctgctgcttcaaattatgcaaattccacttggggtcctggagcctcctccaacagcggc
accaacgccaacccaactcacatctgggacaaggtgattgtagacgggtctgacatggaa
gagtggccttgtattgccagcaaagatgctgagtcttcttccgaaaacaccaccgataac
aacagtgcctcgaaccctggcttggagaagaacgctctgccaggaagcaccactagtaac
aaaggaaaaggaagccagtgccagtctggaagcgctggaaacgaatgtaatcttggggcc
tggaaatctgatcccaaggctaaatctgttcaatcttccaaccctgctgccgagagtaac
aatggactaggtaattggaggaacttgagtggacaagacagaatcagtcccggttctggc
ttcagcaactttaacccaaatagcaacccatctgcttggccagcactggttcaagagggc
aattctaggaaaggaactctggaatctgatagtggtagctccaatgcacagattagcaca
gtaggtcagacctctagggaacagcagtcaaagatggaaaatgcgggtgttaactttgtc
tctggcagagaacaggctcaaattcataacactgatggaccaaaaaatggaaacactaac
tccttgaacttaagttcaccaaaccctatggagaataagggaatgccctttgaaatgggc
ttggggaacccttccaggagcactgacaccccttctcaaagcactggagaaagaaagact
gggagtgttggatcttggggtacagctagggggtcttctggaactgacacagtctctggg
cagagcaattctggaaaccatgggaacaatggaaaggatagagaggactcctggaaagga
gcttctgttcaaaaacctaatgggtcaagaagtgagtcttgggataacaataaccggtct
acgggtggtgggtcttggaactttggccctcagcatgcaaatgaaagcaaatggggtgaa
gggaacaaattaacatctggggtctctcagggagaatggaaacagctgtctgggtctgat
gaactgaagattggagagtggagtggtccaaaccaaccaaattctagcactggagcatgg
gacaatcaaaaaggccaccctcttcctgaaaaccaaggcaattcccaggctccctgttgg
ggaagatcttccagctctgcgggaagtgaggttggaggtcaaagcactggaagcaaccac
aaagcaggaagtagtgacagtcacaattctggacgccgatcatacaggcctacgcatcct
gattgccaggcagtcctgcagaccttgctgagcaggactgacttggacccccgagtgctt
tcaaacaccggctggggccagactcaaattaagcaagataccgtgtgggacattgaagag
atgccacggcccgaggggaagtctgataaaggaactgaggggtgggagagctctgccaca
cagacaaagaactcagggggctggggtgatgtacccagccaaagcaatcaaaacaagtct
ggatggggtgagctctcaaccccaacggagtggaaggaccccaaaagtactggaggatgg
aatgactataagaactccaattcttctaattggggaggaggaaggcaagaagaaaaatca
tcttcctcttggaatgacagctctagtaaggatcaggggtggggtggacggcaaactaat
caaggatggtcttctggaaagaacggttggggagaggaagttgaccaaacgaaaaacagt
aactgggaaagtgcaggaaacaagccagtgtctggttggggtgaaggtgggcaaaatgag
attggaacttggggtaatggtgcaaatacaagctctgcttcaaagggtggatgggacgat
tgtaaaagaacttcaacatggaacgagacgggtcgacagcccaactcctggaacaagcag
cagcaacagcaccagcagcaacagcaggagtcttctggttcctggggtccaccgccccaa
actccaagtaatgggcggcctccaaacccaaactggaacaatggaccacagccagctgcc
cccaaagaggaggagcctagtggctgggaagaaccttctccacagtcaatcagtcgaaaa
atggatattgatgatggcacttcagcgtggggagatcctagcagttataactacaagaat
gtgaatctgtgggacaagaactcacaaggaggacaggccccacgggagcagagcctgcct
actccaatgactagcaaatcacaagcatcagtctggagcaaaagcactccacctgctcca
gacaatggtacgtccgcctggggtgagccaaatgaaaccagtcccgggtggggtgaagta
gatgatacaggagcatcgactacaggctgggggaatgcaccttccaacgccccgaatgcc
atgaaatctagttctaaatctatgcaagatggctggggagagagtgatgggccagtgaca
ggaacacgtcattccagctgggaagaggaggaggagggaggagtctggaacacagcaggc
tctcagggaagcagttcctcccacaactcaacaagctggggacaaggaggaaagaaaaca
caaatgaagtgtgcattaaaaggaggaaatagtgattcgtggatgaaccctttgtccaaa
cagttttcaaatatgggcttgctaagtcaaactgacgacattccaggcagtaagatggac
ttgtctgtaggtggtctcccagataagaagtttgaagtagataaacgagccgtgaatctc
ggggattttaatgacatgatgagaaaggatcgatctgggttccgtccacctaattccaaa
gacatgggaaccacagatagtgggccttattttgagaagggtggcaatcatggtttgttt
ggaaacagcacagcacaatcgaggggcatgcacacaccagtgcagccactaaatccttcc
cccaatatccgggcgcaagtgcctccccaattcctttctccccaggtttcggcctccatg
ctcaaacagtttcccaacagtggcttgaatcctggtcttttcaatatgggcccccagctt
tctccacaacagattgccatgctgagccagcttccacagattccccagtttcaattagct
tgtcagctcctccttcagcagcagcagcagcaacagctgttacagagccagagaaagtta
tctcaagctgtgcgacaacagcaggagcaacagattgctcgtatggtgagtgccctccag
cagcagcagcagaggcagcctggcatgaagcattcgccatcccaccctgttgggcctaag
ccacatttagacagcatggtacccaatcctttgaatgtgggtctctcagatttacagacc
aaagggcagatacctggatacggttcaggtggctttggctcaagtggcatggattatggc
atggtgggagggaaagaggctggaacagaatcccgctttaagcagtggactatgatggaa
gggctgccctctgtggcttcacaagatgccaatatgcacaaaaatggtgcaatagtgccc
cctggaaaggctcgtggaggatcgccctacaaccagtttgacataatccagggcgatcca
ctcagcagccacgcaggccctgctggtgatagttggttacctgccaaatctccaccaaca
aacaagattggaagtaaatccagcaatgccagctggcctccagagttccaaccaggagtg
ccatggaaaggtatacaaaacattgaccctgaatctgatccctacgtgacccctggaagt
gtgctgggggggacagccacatctcccattgtagatactgaccaccaacttttgcgggac
aacaccacagggtctaattcttccctcaacacctcgctgccttcacctggtgcctggccc
tacagtgcctctgacaattccttcaccaacgttcatagcacttcagcaaaattcagtgat
tacaaatcaacatggtccccagatcccataggacacaatcccactcatctctccaacaag
atgtggaaaaaccatatttcctcaaggaacactacagggctgccccgcccacctcctggc
ctgaccaaccccaaaccatcatctccatggaacagcacagcaccccgatcggtcaggggc
tggggggcacaggactcaaggcttggctctgcatctacttggagtgatggtggctcagtt
cgtcctagctactggctggttcttcacaatctcactccacagattgatgggtcaaccttg
aggacgatctgcatgcagcatggcccactgctgacattccatctgaacctgacccagggc
accgccctcatccgatataacaccaaacaagaggcggccaaggcccagactgcactgcac
atgtgtgtgttgggaaacactaccatcctggctgagtttgccacagacgaagaggttagt
cgctttttggcacaagctcagccccctacacctgcagcaaccccgagtgcacccgcagcg
ggctggcaatccctggagacaggacagaaccagacagatccagttggacctgctttgaat
ctctttggtgggtcaacagggcttgggcagtggagcagtggtggcggcggcggcagcagt
gggggtgatctcactggcgcttcattgtgggggcccccaaactattcttcaagcttgtgg
ggggtcccaagcgtagaggatccacacagaatgggcagccctgctcccttactacctgga
gaccttctgggaggagggtcggattcaatctga
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integrated database retrieval system
