Ficedula albicollis (collared flycatcher): 101812815
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Entry
101812815 CDS
T02815
Symbol
COL22A1
Name
(RefSeq) collagen type XXII alpha 1 chain
KO
K16630
collagen type XXII alpha
Organism
fab
Ficedula albicollis (collared flycatcher)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
101812815
NCBI-ProteinID:
XP_016151619
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Position
2:complement(152610078..152716593)
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AA seq
1010 aa
AA seq
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MGKTPHLQGDRGLDGFPGKPGVEGKQGPPGSPGPPGASGTKGDKGEPGLPGLPGTSVHIE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NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaccccacatcttcaaggagacagaggcctggatgggttccctggaaagcca
ggagtggaggggaaacagggccctcctggcagccctggccctcctggtgcaagtgggacc
aaaggagacaagggtgaaccaggtcttccaggattgcctggcacttcagtgcatattgaa
ggcctaaaaggagaggaaggaaagcctgggccacgaggaccacaaggccaacctggactt
cctggacctccagggcagcctggtctggaaggcaagcctggagtccctggtttgccaggc
caaaggggtaaaaagggagaaccaggattcccaggaatcaatggtctgatcggccctcag
ggacctccagggcccccaggcactactggacccccaggaccacctgggccaccgggactg
ccaggagagattggagtttctggtaaaactggaccacctggaccagctgggctgcctggc
aaagatgggctcccagggctcccagggcttccaggtcaaaagggagaacggggggaaaag
ggtgaggaaggctttcctggaaaagctggccttaagggtgaaccaggaagccgtggccaa
cctggtgagcagggtgaagcaggttttcctggtcctaggggcttacctggactgagagga
gaaaaaggagaccagggagaaaagggaagagacggtctcccagcaatgaaaggtgaaaga
ggagaaaagggtgacacaggttcccctggacccccaggcctacctggaacaacagccttt
gtcaccccacaccccaggattcctggtgaacctggaccaaaaggggacaaaggagatcaa
ggaatgagtggagagcctggattacctggagtcccaggtgagcaaggtgcaccaggacct
gcaggactacagggtgcaaagggggagaaaggagcccgaggagaggctggagcacctgga
gagactggtttgagtggaccagcagggcccccaggtccaagaggcttgccaggaaatgtg
ggtgtgcctggaggccctggactcccaggaagggcaggagaaaagggggaaaagggtgat
cctggaaaagaaggaaaagtgggtttacctgggccgcctggtgagccagggcgtgctgga
gagccaggattgcctgggaagggtaaagatggagaaaggggggaaagaggaccaccaggc
ttaccaggaccctttggacataagggtgagaggggagctcctggcctccctggacagcca
ggagacagaggagtgccaggaatcggcctgcctgggccccctggccctgcaggaccccca
ggagacaaagggtcactgggtccccgtggtgtacctggtatccctggaccacaggggcct
cctggccaggatggtgtacctggaaatccaggggaaagaggacctcctggaaaacctggt
tccccacccctgctcactccagaggatataaatctcctagtaaaggatgtgtgcagtgag
tgccctcctggcccaccaggactgccaggcatcccaggtttcaaaggggataaaggtctc
cgaggaccaccaggtagagatgggcaggatgggaaaacggggattgctggtcccagaggt
cctccaggcccacctgggctcgatggcccaaagggtgctaaaggagaccgtggtatgact
ggggaagtaggagaaaaaggtgaacagggccaccctggaatgcctggcttctcaggggct
cctggaaaccctggtccacctggatcagatggggcaccaggaccaataggaccagcagga
aacccaggagacatgggcaaagatggtcccccaggcccacagggcccaccagggctgcct
ggactcccaggcatcgctgggaatgatggcaaggatggcaaaccaggatctctgggggag
ccgggcaagcctggagaacaagggctcccaggccgggagggtgccagaggattgccgggt
ttcaaaggacagagaggagatacaggtcccccaggtccccggggggagccaggtgtgatg
ggtcctgctggtcgtgaggggccaccagggaaggatggtgatcctggtcccatcggtcca
cagggccctcgaggactgcgagggcagccgggcaagaatggagtgcctggatctgcagga
gaacccggccctgctggcatcccaggccccaagggaaataaaggagaaacaggcagccca
ggactccctggctttataggacccagaggaccacctggagagccaggagagaaaggtcct
cctggaaaagagggcacaccagggaaacagggtgcaattggctccaaaggagagaggggt
gagcctggcatcaaaggtgaaaaaggccctcgaggagaaaaaggtcctccaggtgatcct
gggatacctggtcataagggccatccaggactgatgggtccccacgggcctccaggagac
actgggcaagttggacctcctgggcctccaggacagccaggatttccaggaccaagggga
gaacccccatctctagagactttgaggagactcatccaagaggagttatccaagcagcta
gatgcaaagttaccctatatcctggctcagatacagcctgcacaggtaaaagcatcccat
ggcagaccaggacctcctggtccccctgggaaggaaggactcccaggaagaactggccct
ccaggagagcctggccggcctggacagactgggtctgaagggccacctggacccattggt
cccaaaggagaaagaggagcaaagggtgagaaaggagacactggcattggccaacgaggg
gaaattggtcctccaggaattccaggcctcccaggggagcctggttatgccaaagatggg
atgccagggccccctggccctgcaggtgaagcgggtgtgccgggtctggcagggccccag
ggccccccgggagccagtggacagtgcgacccctcccagtgcgcctactatgcaagcctg
gctgcccggccccccaatgtcaaagggccatag
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