Ficedula albicollis (collared flycatcher): 101812834
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Entry
101812834 CDS
T02815
Symbol
SMARCAL1
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fab03036
]
101812834 (SMARCAL1)
Chromosome and associated proteins [BR:
fab03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
101812834 (SMARCAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
DUF7480
Hac8_like_N
DUF7723
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
101812834
NCBI-ProteinID:
XP_005049502
UniProt:
A0A803VJW1
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All DBs
Position
7:complement(24163930..24199065)
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AA seq
964 aa
AA seq
DB search
MSSGLTEEQKRRIEENRQLALARRAERLAAQRAGHGGIAAAAQKEQSPGNPGNSKEENNH
GFTSQHRQNPHRPVEQKSCLQKGYNHYTANQQMAGSHREQQKSCLEDSEQASGLKQFPAM
NSRGYSHKHYLDADSQEHGQHTSVNHGTFQQPKCYPAFKNPTGPPHPRFIDNGHHDGSKD
LQTQNKSAIKDVSTPSSAALSDSEMLININRPTEGTGGGFVSQASGRMQKLNTSAGVGST
FEAASHKKANNVTKGKCVKYGEDRFQVEIGYNAELIAVFKKVPSKAYDPAMKKWNFSMQD
YNSLLEEANQLSSVILAPLEGENVVGLASGSHFVGSGVDVKSLLKMCKNWKKPSALVRGR
CVLISRLRFEVDIGYSAELIGVFKQMDSRNYDMNTRKWNFLLEDYPKLMVVLLSLASVEV
EPLPEAVIKTFAAQLQRSPSQTDIPDADLSVVDSKIVTSLMPFQREGVNFAISRNGRLLL
ADDMGLGKTIQAICIAAYYQQEWPLLVVTPSSVRFTWAEAFHRWLPSLSPGSTNVIVSGK
DNLTGSLINIISFDLLSRMDKQLKSTFQVVIVDESHFLKNTKTARCQAAMPLLKAAKRVI
LLSGTPAMSRPAELYTQIAAVQPSFFPQFHCFGLRYCDARKMPWGWDYSGSSNLTELKIL
LEESIMIRRLKSDVLSQLPAKQRKMVVVAPEGISAKTKAALAAEAKMMVKGYASKQQEKE
ALLVFFSRTAEAKIRSVVEYILELLESGNNKFLVFAHHKIMLDVIVAELKKKHIEHIRID
GSTSSAERQSLCQKFQFSEKQAVAVLSLTAANMGLTLSAADLVVFAELFWNPGILIQAED
RAHRIGQTSSVNVHYLVAKGTADDYLWPMIQEKIKVLGEAGLSETNFSETAESTNYCPKT
DPKQKTIYDLFQKTFSESRDDADDVLFLEAADAGCEFDSGSALQDREAETCSVSPKKKRR
IEEV
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaggccttacagaggagcagaagagaaggattgaagagaaccgccagctggct
ttggctaggagagcagagaggctggcagcccagagagctgggcacgggggcatcgctgca
gctgcacagaaagaacagagtccgggcaatccgggaaactcgaaggaagaaaacaatcat
gggttcaccagccagcaccgacagaatccacacaggcctgtggagcagaagagctgtctc
cagaaaggctataaccattacacagcaaaccaacagatggctggctcacacagagagcag
caaaagagttgtttagaggactcggaacaagcaagtggccttaagcagttccctgcaatg
aattctcggggttactcccataaacattacttggatgctgatagtcaggagcatggacaa
cacacttcagttaatcacggaacattccagcagcccaaatgctacccagctttcaaaaac
cccacaggaccacctcatccaagattcattgataatgggcaccatgatggtagtaaagat
ttacaaactcagaacaaatctgccattaaagatgtttctacaccaagcagtgctgcccta
agtgattcagaaatgctgataaacataaacagaccgacagaaggaacagggggaggtttt
gtctctcaggccagtggtaggatgcagaaactgaatacctctgctggtgtgggctctacc
tttgaagctgcatctcacaagaaagcaaataatgttacaaaaggaaaatgtgtgaaatat
ggggaagaccgattccaggttgaaatagggtataatgctgaacttattgctgtgtttaag
aaggtaccaagcaaagcctatgatcctgctatgaaaaaatggaatttcagcatgcaagat
tacaacagtctcttggaagaagcaaatcaactttcatcagtaattctggcaccactggaa
ggagaaaatgtggttggcttggcatcaggctctcattttgttggcagtggggttgatgtg
aaatccctcttgaagatgtgtaagaactggaagaagccctcagcccttgtcagagggagg
tgtgtgcttatctctcgcttgcgatttgaggtcgatattgggtattctgcagaactgatt
ggggtgttcaaacagatggattccagaaattatgatatgaataccagaaagtggaatttc
ctgctggaggattaccccaaactaatggtagtgttactgagcctcgcgtccgtagaagtg
gagccactgcctgaagcagtaattaagacctttgctgctcaactccagagatctccatca
cagacagacattcctgatgctgacctttcagtagtggactccaaaatcgtgacgagcctc
atgccctttcagcgggaaggtgtgaactttgcaatttccagaaatggacgtttgctcctc
gcggatgacatgggcctgggcaagaccatccaggccatctgcattgctgcctattaccag
caggaatggcccttgctggtggtcactccttcttctgtgaggtttacatgggcagaggca
tttcacagatggcttccatccttgagtccaggaagcaccaatgtcatagtgagtgggaaa
gacaacctcacaggaagcttgatcaacatcatcagttttgatctcctcagcaggatggac
aagcaacttaagagcacattccaagtagttattgttgatgaatctcatttcctgaagaac
acaaaaactgcacgctgccaagctgccatgcctctactcaaggctgccaagagagtgatc
ctgctgtcgggaacgccggccatgtcgcggccggccgagctgtacacgcagatcgccgct
gtgcagcccagcttcttcccgcagttccactgctttgggctgcgctactgcgatgccagg
aagatgccgtggggttgggactactctggatcatccaacttaactgaactgaagattttg
ctggaagagtccatcatgatccgacgtctgaaatcagatgtgctttcccagcttccagca
aagcagcgcaaaatggttgtggtggctcctgagggcattagtgcaaagaccaaagctgcg
ctggcagctgaagcaaagatgatggtcaaaggatatgcaagtaaacaacaggagaaggaa
gctcttcttgtcttcttcagcagaacagcagaagctaaaatccgctcagtcgtagaatac
atcctggagttactagaaagtgggaataataaattcctggtgtttgctcatcacaagata
atgctggatgtgatagttgcagagctgaaaaagaaacacattgagcacattcgcattgac
ggctccacatcttcagctgagcggcagtctctgtgccagaagttccagttctcagagaag
caggctgtggccgtcctttccctcactgctgcaaacatgggcctgacattgtctgctgca
gatctggtggtgtttgcagagctcttctggaacccagggattttgatccaagcagaagat
cgggcacaccgaattggacagaccagctctgttaatgttcactacctggtggctaaaggc
acagcagatgactatttatggccaatgattcaggagaagatcaaagtgctgggtgaagct
ggtctttcagaaaccaatttctccgaaacagctgagtcaactaattactgtcctaagaca
gatccaaagcagaagactatctatgaccttttccagaagaccttctctgagagcagagat
gatgctgatgacgttttgtttttggaggcagctgatgctggctgtgagtttgactctggc
agtgccttgcaagacagagaagcagagacatgttcagtgagtcccaagaaaaagcggcgt
attgaggaagtgtaa
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