Ficedula albicollis (collared flycatcher): 101812844
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Entry
101812844 CDS
T02815
Symbol
TRNT1
Name
(RefSeq) tRNA nucleotidyl transferase 1
KO
K00974
tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:
2.7.7.72
3.1.3.- 3.1.4.-]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fab03016
]
101812844 (TRNT1)
Enzymes [BR:
fab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.72 CCA tRNA nucleotidyltransferase
101812844 (TRNT1)
Transfer RNA biogenesis [BR:
fab03016
]
Eukaryotic type
3'processing and CCA adding factors
CCA adding factors
101812844 (TRNT1)
Prokaryotic type
101812844 (TRNT1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-GeneID:
101812844
NCBI-ProteinID:
XP_016156888
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Position
12:19991731..19995302
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AA seq
444 aa
AA seq
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MAGTPPTVPGSSQPGLRHCRGSRHSHGCSGNSIPGPRLGSSLLNLPHLIAVPPCPVIPSP
ELFEKKSYELRIAGGAVRDLLSGVTPQDIDFATTATPAEMKEMFTAAGVRLINNKGEKHG
TITARLHEQNFEITTLRIDVVTDGRHAEVEFTTDWHKDAERRDLTVNSMFLGLDGTLYDF
FNGYEDLKNKKIRFVGKAAERIQEDYLRILRYFRFYGRIAETPGDHEHITLQAIKENAKG
LAGISGERIWVELKKILIGNHVNHLVQLMYELDIAQYIGLPLDGNLEEFARVTKNIQNLS
PKPMTVLTSLFKGKDDVTNLDLRLKISKEEKNLGLFLVKHRQELTKASGPEPLRPYQDFL
MDSREANTNSKIFELLKYQGEEQLLREMQAWTVPSFPVSGHDLRKMGVSSGKEIGTALQQ
LRDEWKKSGYHMDKEELLSCLKKV
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcagggacacctcccactgtgccaggctcctcccagcctggcctgcgacactgccgg
ggatccaggcacagccacggctgctctgggaattccatcccgggccctcggttgggatcc
tcactcctaaacctccctcaccttattgccgttcccccttgccctgtcattccgtcccct
gaactgtttgagaagaagagctatgagctgagaatagcaggaggggctgtgagggattta
ctgagcggggtgacaccacaagacatcgattttgccaccacagctacaccagcagagatg
aaggaaatgttcacagcagctggggttcgtctgatcaataacaaaggagaaaaacacgga
accatcactgccaggctccatgaacagaattttgaaattaccactctccgaatagatgtt
gtcaccgatggccggcacgcagaggtggagttcaccacagactggcacaaggatgctgag
aggagggatctcactgtcaactccatgttcttaggtttggatgggactctctatgatttc
tttaatggttatgaagacttgaaaaacaagaaaatcagatttgtggggaaggcagctgag
agaatacaggaagattatttaagaatcctgagatactttagattttatggaagaattgca
gagacacctggagatcatgaacatattacactgcaagcaattaaagaaaatgccaaaggc
ttggctggaatatcaggagaaaggatttgggtggaactgaaaaaaattcttattggaaac
catgtcaatcatttggttcaacttatgtatgagctggatattgcccagtacatagggtta
ccacttgatgggaatttagaggaatttgccagagtcactaaaaacatccaaaacctgtct
ccaaaacctatgactgtcctgacatccttattcaaggggaaggatgatgtcacaaacctg
gacctcaggcttaaaatctccaaggaggaaaaaaaccttggccttttcttggtgaagcac
aggcaggagttaaccaaagcctcggggccagaaccacttcgaccataccaggacttcctg
atggattctagagaagctaacaccaactccaagatctttgagctgctgaagtaccaagga
gaggagcagctcttgagagaaatgcaggcctggactgtgccctccttccctgtcagtggc
cacgacctgaggaagatgggggtgtcctcagggaaggaaattgggacagcactgcagcag
ctgagggatgagtggaagaagagtggctaccacatggataaagaggaactgctgagctgc
ctgaagaaggtgtga
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