Ficedula albicollis (collared flycatcher): 101812849
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Entry
101812849 CDS
T02815
Symbol
TFIP11
Name
(RefSeq) tuftelin interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fab03041
]
101812849 (TFIP11)
Spliceosome [BR:
fab03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
101812849 (TFIP11)
Other components
Complex C specific factors
101812849 (TFIP11)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
101812849
NCBI-ProteinID:
XP_005055056
LinkDB
All DBs
Position
15:complement(5138215..5149225)
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AA seq
827 aa
AA seq
DB search
MSMSHLYGTDGDDGVEMESFEVSDWDLQNEFNPHRQRHRQTKEEATYGVWAERDSDEERP
SFGGKRSRDYSAPVSFVSAGLRKAAAEELSDEDSDDDEKPVKQEEIPKEFVPKKLKTGGN
FKPSQKGFAGGSKSFVDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQR
KGKGAVGAYGSERTTQSLQDFPVVDSEEEAEEPVAEELGQWQKDPNGGKKKPKYSYKTVE
ELKAKGRISKQLAAPQKELSQVKVIDMTGREQKVYYSYSQISHKHNIPDDSPQQPLGKDS
KPQGFALPELEHNLQLLIDITEQEIIQSDRQLQYERDMVVNLSHEIQKMAEVLSHEEKAI
SNLSKVLDMVEECERRMQPGCENPLTLDECAKIFETLQDKYYEEYRMSDRVDLAVAIVYP
LMKEYFKNWDPLKDCTYGTEIIAKWKSLLENDQLLSHSGQDLSTDAFHRLMWEIWMPYVR
NIVARWQPRNCGSMVDFLDSWVNVVPVWILDNILDQLIFPKLQKEVESWNPLTDTVPIHS
WIHPWLPLMQARLEPLYSPIRNKLANALQKWHPSDSSAKLILQPWKDVFTPGSWEAFMVK
NIVPKLGMCLNELIINPHQQHMDAFYWVIDWEGMISVSSLVGLLEKHFFPKWLQVLCSWL
SNSPNYEEITKWYLGWKSMFSDQVLAHPSIKDKFNEALDIMNRAVSSSVGGYMQPGAREN
IAYLTHTERRKDFQYEAMQERREAENMAQRGIGAAAGSVPMNFKDLIQTKAEEHNIVFMP
VIGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgtcgcacttgtacggcacggacggagacgatggcgtggagatggagagcttc
gaggtgtcggactgggacctgcagaacgaattcaacccgcaccggcagcggcaccgccag
accaaggaggaggcgacctacggcgtgtgggccgagcgcgactcggatgaggagcggccc
agcttcggcgggaagcgctccagggattactctgcccccgtgagctttgtcagtgctggg
ctgaggaaggcggcggctgaggagctctcggatgaggactcggatgacgatgagaaacct
gtgaagcaggaggagattcccaaagagtttgtgcccaagaagttaaaaacaggtggaaat
ttcaagcccagccagaaaggctttgcagggggctccaagtccttcgtggattttggcagc
tgggagagacacactaaaggaattgggcagaagcttctccagaagatgggatatgtccct
ggaaggggtctggggaagaatgctcaaggaatcatcaatcccatcgaggccaagcagagg
aaaggcaaaggtgctgtgggtgcttatggctccgaaaggaccacgcagtccttgcaggac
ttccctgtggtggactcagaagaggaagctgaggagccagtggcggaggagctcggccaa
tggcagaaggacccgaatggaggcaagaaaaagcccaagtacagctacaagacagtggaa
gagctgaaagccaagggcaggatcagcaagcagcttgcagcccctcagaaggagctgtcc
caggtcaaggtgattgacatgacgggccgggagcagaaggtttattacagctacagccag
atcagccacaagcacaacatcccagatgacagcccccagcagcccctgggcaaggactcc
aagcctcagggctttgccctgcctgagctggagcacaacctgcagctgctcattgacatc
acagagcaggagatcatccagagcgaccggcagctgcagtacgagagggacatggtggtc
aacctgagccacgagatccagaagatggctgaggtgctgtcccacgaggagaaggccatc
agcaacctcagcaaggtgctggacatggtggaggagtgtgagaggcggatgcagccaggc
tgtgagaaccctttgaccctggatgagtgtgcaaagatctttgagaccctgcaggacaag
tactatgaggagtacaggatgtcagacagggtggacctggcagtggccatagtttatcct
ctcatgaaggaatacttcaagaactgggatcccctcaaggactgtacatatggcacagag
atcatagccaagtggaagagccttctggaaaatgatcagctgttatcccacagcgggcaa
gacctgtcaacagatgcttttcacagactgatgtgggagatctggatgccatatgtcaga
aacatcgtggcgcggtggcagccaaggaactgcggatccatggtggatttcctggatagc
tgggtgaacgttgttcctgtgtggatactggataacattctggatcagctcatcttcccc
aagctgcagaaggaggtggagagctggaacccgctgacggacacggtgcccatccactcg
tggatccacccctggctgccgctgatgcaggcccggctggagccgctctactcgcccatc
cgcaacaagctggccaacgccctgcagaaatggcaccccagcgactcctctgccaagctc
atccttcagccctggaaggatgtgttcactcctggctcctgggaggctttcatggtcaag
aacatcgtgcctaaactcggaatgtgtctgaatgagctcatcatcaacccccaccagcag
cacatggatgccttttactgggtgattgactgggaggggatgatttctgtctccagcctg
gttgggctgctggagaaacacttcttcccaaagtggctgcaggtgctctgctcttggctc
agtaacagccccaactacgaagagatcaccaagtggtacctgggctggaagtccatgttc
tcagaccaggtgctggcacatccctccatcaaagacaagttcaatgaagcccttgacatc
atgaaccgggctgtgtcctccagcgtgggcgggtacatgcagccgggcgcccgggagaac
atcgcctacctgacgcacacggagcggcgcaaggacttccagtacgaggccatgcaggag
cggcgcgaggccgagaacatggcgcagcgcggcatcggcgccgccgccggctccgtgccc
atgaacttcaaggacctcatccagaccaaggccgaggagcacaacatcgtcttcatgccc
gtcatcggcaagcggcacgagggcaagcagctctacaccttcggcaggatcgtcatctac
atcgacaggggcgtggtcttcgtgcaaggggagaagacctgggtgcccacctcgctgcag
agcctcattgacatggccaagtga
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