Ficedula albicollis (collared flycatcher): 101813171
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Entry
101813171 CDS
T02815
Symbol
ATG4B
Name
(RefSeq) autophagy related 4B cysteine peptidase
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04136
Autophagy - other
fab04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101813171 (ATG4B)
04136 Autophagy - other
101813171 (ATG4B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fab01002
]
101813171 (ATG4B)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fab04131
]
101813171 (ATG4B)
03029 Mitochondrial biogenesis [BR:
fab03029
]
101813171 (ATG4B)
Peptidases and inhibitors [BR:
fab01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
101813171 (ATG4B)
Membrane trafficking [BR:
fab04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
101813171 (ATG4B)
Mitochondrial biogenesis [BR:
fab03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
101813171 (ATG4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
101813171
NCBI-ProteinID:
XP_016156171
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All DBs
Position
9:4562080..4576006
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AA seq
320 aa
AA seq
DB search
MLRCGQMIFAQALVCRHLGRDWRWIKGKRQMDNYFNVLNAFIDKKDSYYSIHQIAQMGVG
EGKSIGQWYGPNTVAQVLKKLATFDTWSSLAVHIAMDNTVVMEEIRRLCQSNLPSAGAAA
CPALESDVLYNGCPEDVGLRERLTPWKPLVLLIPLRLGLTEINEAYIETLKHCFMMPQSL
GVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPGESGCLPDESFHCQHPPCRMSIAEL
DPSIAVGFFCNTEADFNDWCQQIKKLSLVRGALPMFELVERQPSHFSSPDVLNLTPDSSD
ADRLERFFDSEDEDFEILSL
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctgtggccagatgatctttgctcaggccttggtctgcaggcatttgggaaga
gactggaggtggataaaagggaagaggcagatggataattacttcaacgttcttaatgcc
ttcattgacaaaaaagacagctactactccattcaccagatagcccagatgggagttggg
gaggggaaatccataggccagtggtacggaccgaacacggtcgcacaggtgctcaaaaaa
cttgcaacttttgatacgtggagttccctggcagtacacatagccatggacaacacagtg
gtgatggaagaaatccggaggttgtgccagtccaatctgccaagtgctggagctgcagcc
tgccctgccctggagtcagatgtgctctataatgggtgcccagaggatgtggggctcaga
gagaggctcaccccatggaagccactggtgctgctgatacctctccgcctcgggctcaca
gagatcaatgaagcctatattgaaacactaaagcactgcttcatgatgccccagtccctg
ggagtgattggagggaagccaaacagtgctcactacttcattggctatgtaggtgaggag
ctcatttacctggacccccacaccacgcagccggcagtggagcccggtgagagcggctgc
ctccccgacgagagcttccactgccagcaccctccgtgcaggatgagcatcgccgagctc
gacccctccattgccgtgggatttttctgcaacacagaggcagacttcaatgactggtgc
cagcaaatcaaaaagctgtccctggtcagaggagcactgcccatgttcgagctggtggaa
cgccagccctcacacttctccagccctgatgtcctgaatctcacaccagactcctctgat
gccgacagattggaaaggttctttgactcggaagatgaagactttgaaatcctgtccctt
tga
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