Ficedula albicollis (collared flycatcher): 101813245
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Entry
101813245 CDS
T02815
Symbol
GABPB1
Name
(RefSeq) GA binding protein transcription factor beta subunit 1
KO
K09454
GA-binding protein transcription factor, beta
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fab03000
]
101813245 (GABPB1)
03029 Mitochondrial biogenesis [BR:
fab03029
]
101813245 (GABPB1)
Transcription factors [BR:
fab03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
101813245 (GABPB1)
Mitochondrial biogenesis [BR:
fab03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
101813245 (GABPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
ANK_LRRK2
LAMTOR5
CREPT
CCDC84
Motif
Other DBs
NCBI-GeneID:
101813245
NCBI-ProteinID:
XP_005051955
UniProt:
A0A803VIB8
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Position
10:complement(12437872..12451882)
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AA seq
383 aa
AA seq
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MSLVDLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHYSTTEVLLRA
GVSRDARTKVDRTPLHMAASEGHASIVEVLLKHGADVNAKDMLKMTALHWATEHHHQEVV
ELLIKYGADVHAQSKFCKTALDIAVDNGNEDIAEILQIAMQNQINTNPESPDTVTIHAAT
PQFIIGPGGVVNLTDETGVSAVQFGNSSTSVLATLAALAEASAPLSNSSETPVVATEEVV
TAESVDGAIQQVVSSGGQQVITIVTDGIQLGNLHSIPTSGIGQPIIVTMPDGQQVLTVPA
TDIAEETVISEEPPVKRQCIEIVENRVESAEIEERETLQKQLDEANREAQKYRQQLLKKE
QEAEAYRQKLEAMNRLQTNKEAV
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtcactagtagatttgggaaagaaacttttagaagctgcacgagcaggtcaagatgat
gaagttcgcattttgatggcaaatggagcaccttttaccacagactggttgggaacatct
ccacttcatctagcagcacaatatggacactactccaccacagaagtgttgctgcgagca
ggtgtgagtcgggatgccagaaccaaagtggacagaactccattacatatggcagcatca
gaaggccatgccagcatagtagaagtcttacttaagcatggtgctgatgtcaatgcgaag
gacatgctcaaaatgactgcacttcactgggctactgaacatcaccaccaagaagttgta
gaactcttgataaagtatggagcagatgttcatgctcagagtaaattttgcaaaacggca
ttagatattgcagtagacaatggaaatgaagacattgcagaaatattacagattgcaatg
cagaaccaaatcaatacgaatcccgagagtccagacactgtgacgatacacgcagccacg
ccgcagttcatcattggacctggaggggtggtgaacctaacagatgaaacaggagtgtct
gctgtacagtttggaaattcatcaacatcagtattagctacgttggcagctttagcagaa
gcgtcagctccactgtctaattcttcagaaacaccagttgtggccacagaagaagttgtg
actgcagaatccgtggatggggccattcagcaggtggtcagttctggaggccagcaggtc
attaccatagttacggacggcatccagctgggcaacctgcattccattccaaccagtggg
ataggacaacccatcattgtgaccatgccagatgggcagcaagtgttaacagttccagca
acagacattgctgaagaaactgtaataagtgaagaaccgccagtgaagagacaatgcatt
gagattgttgaaaatcgtgtggagtctgcagaaatagaagaaagagaaactcttcagaaa
cagctggatgaggcaaacagagaagcacaaaaatatcgtcagcagcttctaaagaaggaa
caagaagcagaggcctatcggcagaagttagaggcaatgaaccgcctccagactaataaa
gaagctgtttaa
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