Ficedula albicollis (collared flycatcher): 101813303
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Entry
101813303 CDS
T02815
Symbol
CUX2
Name
(RefSeq) cut like homeobox 2
KO
K09313
homeobox protein cut-like
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fab03000
]
101813303 (CUX2)
Transcription factors [BR:
fab03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
101813303 (CUX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
DUF4618
ATG17_like
Homeobox_KN
HNF-1_N
Abdominal-A
Golgin_A5
PKcGMP_CC
DUF4407
Rootletin
SOAR
FH2
Motif
Other DBs
NCBI-GeneID:
101813303
NCBI-ProteinID:
XP_005055330
LinkDB
All DBs
Position
15:3724411..3796911
Genome browser
AA seq
1343 aa
AA seq
DB search
MLGWEWCCQLKDAHRPPKLWHGHDLVAVVASLPGIVPSAWGRRIPPWYPRSVKFPVTALS
KRSEEAGKAFLSVCKRLLQAPDPAPVLEAARSLEDRLQQLEPEPPPPPLKDLSRPWKRQP
ELASTKERREGKSPAAEPPLPGTDGKAPGTESSLLRNEADKQKGLQEAQVTLAARLGEAE
EKIKVLHAALKATQTELLELRCKYDEEAASKADEVAMIMTNLEKANQRAEVAQREVESLR
EQLAAVNSSLRLACCSPTGSTGDKVNYSMCSGSRLEAALSAKDREILRLLKDIQHLQSSL
QELEESSANQIAELEGQLAAKNEAIEKLEEKLQAQADYEEIKTELSILKAMKVASAGCSL
PQSISKAEEALLLGKEAFYPSQKYLLEKPSLLASTEEDHSEDESGKDSLGMEQPYPSPHH
APADDPASPTPLPALPGPGLAPDGPRTFSLSPFPGGERLPGDPKAPHLPLPSYKSESSSG
APPFPSSFFGAKSSTVHPVPVPATRATSPPGEPSEGSAGSAAEEEQLDTAEIAFQVKEQL
LKHNIGQRVFGHYVLGLSQGSVSEILARPKPWHKLTVKGKEPFIKMKQFLSDEQNVLALR
TIQVRQRGSITPRIRTPETGSDDAIKSILEQAKKEIESQKGGEPKTPSASQAVSNGAGGS
SSEDAIKSILEQARREMQAQQQALLDMESGAGGRGGDAAPAERSTLATVSQNIAPAYVKQ
EEGSGASPGPPPPPLAVLSPAAFVQSIIRKVKSEIGDAGSYFDQHWASERSLLSRPYTSV
SPSLSSSSSSYSSMANGRGWPRGEPGEGGTNEDELQPAEEEPQRLSEMKAEGAGAEPAGG
RLSYYPTYVPRTLKPTVPPLTPEQYEMYMYREVDTLDLTRQVKEKLAKNGICQRIFGEKV
LGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLTDQLGQGISQQPTPSQASPVEPQP
SPSPPPSPAEHENGCQEPLTLALESSKENQQPESRSTPALGGKLYPNSQGPMGIQEIVAM
SPELDTYSITKKVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSRPKPWHKLSLKGREPF
VRMQLWLNDPHNVEKLRDMKKLEKKAYLKRRYGLMSAGSDSESPSARSECASPGAPPQEL
SLLQIKKPRVVLAPEEKEALKKAYQLEPYPSQQTIELLSFQLNLKTNTVINWFHNYRSRM
RREMLVEGAQDNDTDPEQSGGAALPGRRAPPSPDLDSEDHKPTLVGGSPPCVAVPLKVKE
EQGDAGGWSRRQDSGAASSPGLTGSASPGPSSAGPVSPALPPAPSPRLSTSVQRRHEKMA
NLNNIIHRLERAANREEALEWEF
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgctggggtgggaatggtgctgccagctcaaggatgcccaccggccccccaagctctgg
catggccatgacctggtggccgtggtggcctcgctgccgggcattgtcccctccgcatgg
ggccgccgtatcccaccgtggtaccctcggtctgtgaaattcccggtgactgcacttagt
aagagaagcgaggaggctgggaaggctttcctgagcgtttgcaagcgattgctccaagct
ccagaccccgctcctgtgctggaggctgcccggagcctggaggatcggctgcagcagctg
gagcccgagccgccgccgccgccgctgaaggatctcagccggccctggaagaggcagccg
gagctcgccagcaccaaagagcgcagggaggggaaatcgccggcagcagagcccccgctc
cccggcaccgacggcaaagcgccgggcacagagagctcgctgctcagaaatgaggcagac
aagcagaagggcctgcaagaagctcaggtcaccttggccgctcggctgggggaggcagag
gagaagatcaaagtgctccacgcagcgctgaaggccacccagacggagctgctggagctg
cgctgcaagtacgacgaggaggcagcgtccaaggcagatgaagtcgccatgatcatgacc
aaccttgaaaaagccaaccagcgggcggaggtggcgcagagggaagtggagagtttgcgg
gagcagctggcagccgtcaacagctccctgcgcctggcctgctgctccccgacaggcagc
acgggggacaaagtgaactattccatgtgctcagggtcgaggttggaggcagctctgtct
gccaaggaccgggagatcctgcggctcctgaaggacatccagcacctccagagctctctg
caggagctggaggaatcctctgccaaccagatcgccgagctggaggggcagctggccgcc
aagaacgaggccatcgagaagctggaggagaagctgcaggcgcaggcagactacgaggag
atcaaaacagagctgagcatcctgaaggcgatgaaggtggcctctgctggctgcagcctc
ccccagagcatctccaaggcggaggaggccctgctgctggggaaggaggctttctacccc
tcccagaagtacctgctggagaagcccagcctgctggccagcactgaggaggatcactcc
gaagacgagtcggggaaggattcactgggcatggagcagccgtacccatccccccaccat
gcccctgctgacgaccccgcctcccccactcccctcccagcattgcctggccccggcctg
gcccccgatggtccccggacattctctctgtcccctttcccggggggcgagcggcttcca
ggggaccccaaggccccccatctcccgctgcccagctacaagagcgagagcagcagcggg
gcacctcccttcccctcctccttcttcggggccaaaagcagcaccgtgcaccccgtccct
gtgccagccacccgtgccaccagcccgcccggcgagccctccgagggcagcgccggcagc
gccgccgaggaggagcagctggacacggccgaaatcgccttccaggtgaaggagcagctg
ctgaagcacaacatcgggcagagggtgttcgggcactacgtgctggggctgtcgcagggc
tctgtcagcgagatcctggcgcggcccaagccctggcacaagctgacggtgaagggcaag
gagccgttcatcaagatgaagcagttcctctccgacgagcagaacgtgctggccctgagg
actatccaggtgcgccagagaggtagcatcacgccgcggatcaggacaccagagaccggc
tccgacgatgccatcaaaagcatcctggagcaggcaaaaaaggagattgagtcccagaag
ggaggggagcccaaaacgccgtcggcatcgcaggcagtgtccaacggggcgggcggcagc
agctcggaggatgccatcaagagcatcctggagcaggcgcggcgggagatgcaggcgcag
cagcaggcgctgctggacatggagtcgggggccggcgggcgcgggggggacgcggcacct
gccgagcgctccacgctggccaccgtcagccagaacatcgcccctgcctacgtcaagcag
gaggagggcagcggggccagccccggcccgccgccgccgccgctggccgtgctctccccc
gccgccttcgtgcagagcatcatccgcaaggtgaagtcggagatcggcgatgccggctcc
tacttcgaccagcactgggcgtccgagcggagcctgctcagccggccctacacctccgtg
tcgccgtcgctgtcctcctcctcctcgagctactccagcatggccaatggccggggctgg
ccgcggggcgagcccggcgagggcggcaccaacgaggacgagctgcagccggcggaggag
gagccgcagcggctgtcggagatgaaggcggagggagcgggcgcggaacccgctggtggc
cgtctgtcctactaccctacctacgtgccacgcaccctgaagccgacggtgccgccgctg
acccccgagcagtacgagatgtacatgtacagggaggtggacacgctggacctgacccgg
caggtcaaggagaagctggccaagaacggcatctgccagaggattttcggagagaaggtg
ctgggactgtcccagggcagtgtgagtgacatgctgtcgcgacccaaaccgtggagcaag
ctgacacagaagggtcgagagcctttcatccgcatgcagctctggctgacagaccagctg
ggccaagggatcagccagcagcccacaccctcccaggccagcccagtggaaccccagccg
tccccctcgccgccccccagccctgctgagcacgagaatggctgccaggagcccctcacc
ctggccttggagagcagcaaggagaaccagcagcccgagagccgctcgacgcctgcgctg
ggcgggaagttgtatcccaacagccaggggcccatgggcatccaggagatcgttgccatg
tcccccgagctggacacctactccatcaccaagaaggtcaaggaggtcttgacggacaac
aatttaggccagcggctgtttggggagagcatcctgggcctgacgcagggctcggtgtcc
gatctcctctccaggcccaagccatggcacaagctgagcctgaaggggagggagcccttc
gtccggatgcagctctggctcaacgacccccacaacgtggagaagctgcgcgacatgaag
aagctggagaagaaggcctacctgaagcgccggtacgggctgatgagcgccggctcggac
agcgagtcccccagcgcccgctccgagtgcgccagccccggcgcgccgccgcaggagctc
agcctgctccagatcaagaagccacgggtggtgctggcgccagaggagaaggaagcccta
aagaaagcctaccagctggagccatacccctcccagcagaccatcgagctgctctccttc
cagctcaacctcaagaccaacacggtcatcaattggttccacaactacaggtcacggatg
cgccgagagatgctggtggagggggcgcaggacaatgacacagaccctgagcagagcggc
ggcgcagccctccccgggcgccgggcccctcccagccccgacttggacagcgaggatcac
aaacccacgctggtggggggctctcccccctgcgtcgccgtgcccctgaaggtgaaggag
gagcagggggatgctggcggctggagccgccggcaggactcgggggcggcttcctcgccc
ggcctcactggctcagcctcaccgggaccgtcctccgccgggccggtctcgccagcgctt
ccaccggctcccagcccccggctcagcaccagcgtccagcggcgccacgagaagatggcc
aacctcaacaacatcatccaccgcctggagcgggctgccaaccgtgaggaggccctcgag
tgggagttctga
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