Ficedula albicollis (collared flycatcher): 101813336
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Entry
101813336 CDS
T02815
Symbol
FAM188B
Name
(RefSeq) family with sequence similarity 188 member B
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fab04121
]
101813336 (FAM188B)
Enzymes [BR:
fab01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101813336 (FAM188B)
Ubiquitin system [BR:
fab04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
101813336 (FAM188B)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
Motif
Other DBs
NCBI-GeneID:
101813336
NCBI-ProteinID:
XP_016151727
UniProt:
U3JDI1
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All DBs
Position
2:complement(3770676..3846681)
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AA seq
724 aa
AA seq
DB search
MDQELPRSALSINNRNELRNVLHLHSLYRQNKAKENPLKTLLEIITNYFLEHRGTSRSAG
SSSALSAPQSKSSASHPDLQDEDHGNASALDESKTQASRSDVENPLDKIPPPRKHQHRSE
KCHTGTTHSSDLPCAWDKKLKDSREDLRAALISEELKSTGKEKSRPRAGLIARGMMAGPV
ASSPEDPQKRRLSKRSTSISSPAQPRGEEHEEQDLSVPSTDLQESKASPTKCNVEFASKT
LLSSHTSSASEKTRSSPKDPEEFFSRLLPERERAKTEGRKSLPGSGADSSEKSLKVSAPH
RHSGAGREKKERSLRKTESRLSGHRKSPTSTGYKEDQMKEVLELVDVEDEETTGEVKTSD
LSTLYMLQIVSKAIDISLAKELKNLLFGSSLCCFSEEWKIQSFTFNNIPQLKYGIVQKKG
GPCGVLAAVQACVLQQLIFADSNRNKDSRCLQPSEAHRTKCLSLALADILWRAGGHEKAL
VALPSGRQQFTPTGKYKADGILETLILHSATRYEDLIVFLQQNIHQFEIGPYGCILLTVS
VILSRSINLVRSDFDVLTNRLIGSHGYCTQELVNLLLTGKAVSNVFNNVIELDSGNGNIT
ILKGITSRSDIGLLSLFEHYDVCQVGCYLKTPKYPIWLVCSESHFSVLFCLEKDLLSDWK
TGRRFDLYYYDGLANQDEEIRLTVDTTQVCPENKENDLTPPLEHCIRTKWQGAVIDWNGT
EPIL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggaccaggagcttccccgctctgcgctcagcatcaacaacaggaacgagctgaggaat
gtgctgcacctgcactccctgtacaggcagaacaaggcaaaggagaacccactgaaaacc
ctgctggaaattatcactaattacttcctggagcaccgtgggacttccaggagcgctggt
tccagctctgctctgtcagctcctcagagtaagagctcagcatcccaccctgacctgcag
gatgaggatcatggcaatgccagtgctctggatgaaagcaaaactcaggcctccaggtct
gatgttgagaatccactggataaaatccctccacccagaaaacatcagcacagaagtgaa
aaatgccacacagggacaacccacagcagtgacttaccctgtgcttgggacaagaagtta
aaagacagtcgtgaggatttgagagcagctctgatttctgaggagctgaaatccacaggg
aaggagaagtcaaggcccagggctggtctcattgccagagggatgatggctggaccagtg
gccagctcaccagaggatccccaaaaaaggaggctctccaaacgatccacgagcatcagc
agcccagcccagcccaggggtgaagagcatgaagagcaagacctgagtgtccccagcact
gatttgcaggagagcaaagcatctccaacaaaatgcaacgtggaatttgcatcaaagact
ctgctcagctcacacaccagttctgcctctgaaaaaacaaggagcagccccaaagatcca
gaggagtttttctccaggctgctgcctgagagagagagggccaagacagaaggaaggaaa
tctcttccaggctctggtgcagacagcagtgaaaaaagccttaaagtgagtgctcctcac
agacattcaggggctgggagagaaaagaaggagagatccctcaggaaaacggagagtcgg
ttgtcaggccacaggaagtctccaacatccactggctataaagaagaccagatgaaagaa
gtcctagaattggttgatgttgaggatgaagagacaactggagaagttaagacttcagat
ctttcaacactttatatgcttcaaatagtatcaaaggcaattgatatttctcttgcaaaa
gaattaaaaaatcttctgtttggctctagtctttgttgcttcagtgaagaatggaaaatc
cagagttttacatttaacaatatcccacagctaaaatatggcattgtgcagaaaaagggt
ggcccttgtggagttctggctgcagttcaagcctgtgtcctgcagcagctgatctttgca
gacagcaacaggaacaaagactcccgttgtctccagccctcagaagctcacaggaccaag
tgcctgtccttggctctcgctgacatcctgtggcgtgcggggggccacgagaaagccctg
gtggcactgccatcaggaaggcagcagttcactcccacagggaaatacaaggcagatgga
atcctagaaactctaatacttcacagtgccacgagatatgaggatctgattgtatttcta
cagcagaacattcaccagtttgaaattggtccctatgggtgcatcctcctgactgtgtct
gtcatcttatccagatccatcaacctggtgcgcagtgacttcgacgtgctcacaaaccgc
ctgatcggcagccacggctactgcacccaggaattggtgaacttgcttctgactggcaaa
gctgtgtccaatgttttcaacaatgtgatagagctggactctgggaatggcaatatcacc
attttgaaaggcatcaccagccgcagtgatattggtttgctgtccctgtttgagcactat
gatgtctgccaggttggttgttacttgaagactcccaagtacccaatttggctggtgtgc
agtgaaagccacttcagtgtgcttttttgtttggaaaaggatttgctcagtgactggaag
acaggaaggaggtttgatctctattactacgatggcttggccaaccaggatgaggagatc
cggctgacagtggatacaactcaggtgtgccctgaaaataaagaaaatgatcttactcct
ccacttgagcactgtattaggacaaagtggcaaggagctgtcatcgactggaacggcaca
gaacccatcctgtga
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