Ficedula albicollis (collared flycatcher): 101813412
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Entry
101813412 CDS
T02815
Symbol
PCDH19
Name
(RefSeq) protocadherin 19
KO
K16499
protocadherin delta 2
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
fab04515
]
101813412 (PCDH19)
Cell adhesion molecules [BR:
fab04515
]
Cadherins
Protocadherins
101813412 (PCDH19)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
Plug
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
101813412
NCBI-ProteinID:
XP_016153670
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Position
4A:981688..1043068
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AA seq
1094 aa
AA seq
DB search
MGALPALLGAALLWAGAGALVNLKYSVEEEQRAGTVIANVAKDARDAGFVLDPRQPAAFR
VVSNSAPHLVDISPGSGLLVTKQKIDRDLLCRQSPKCVISLEVMSSSMEICVIKLEIKDL
NDNAPSFPTDQIELEISETASPGTRVPLESAYDPDSGSFGVQSYEITPNDLFGLETKTRG
DGSRFAELVVEKSLDRETQSHYSYVITALDGGDPPNFGTVELSIRVIDSNDNNPLFEEPA
YTVSVPENAPPGTPVIRLNASDPDEGTNGQVLYSFHSYVSERARELFQIDPQSGLITVSG
AIDYEEGHVYELDVQAKDLGPNSIPAHCKVTISVQDANDNPPLINLLSVNSELVEVSENA
PLGYVIALVRVSDRDSGANGRVQCKLLGNVPFRLQEYESFSTILVDGRLDREQRDQYNLT
IQARDNGIPSLQATKSFTVKITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDPDL
GLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGNPS
LQSNATVRVIVLDVNDNTPVITAPPLVNGTAEVYIPRNAGVGYLVTVVKADDYDEGENGR
LSYEMVEGDRGFFEIDQVNGEIRTTRAFGENAKTAYELIVVAHDHGKTSLSASALILIYL
SPALDAQESIGSVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRIAEYSY
GHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSE
STFLNVESQNSRNAGSNHIYQHGFTGQSPPQPDLIINGMPLPETENYSFDSNYVNSRAHL
IKSSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGLYCDTAVNDALNTSVPSVGSQGPEQ
EQSEGFHCREECRILGHSDRCWMPRGAAPSRAKSPEHGRNVIALSIEASAADAEHYADCS
TKRTFATFGKEGGEPAAEERPANAKAKRTVDSAACSPKVSGAVREAGNGCEAVSPVTSPL
HLKSPLAKPAVPYGAGHCREREPFGTGGPSRXXXXXXRGADSEGGGHEGNPLLQERRERD
KDSPGARRLKDIVL
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgggcgctctcccggcgctgctcggggccgccttgctttgggccggcgccggggccctc
gtcaacctcaagtactcggtggaggaggagcagcgggccggcacggtgatcgccaacgtc
gccaaggacgcccgggacgccgggttcgtgctggacccccggcagcccgccgcattccgg
gtggtctccaactcggctccccacctggtggacatcagccccgggtccgggctgctggtg
accaagcagaagatcgacagggacctgctgtgccggcagagccccaagtgtgtcatctcg
ctggaggtgatgtccagctccatggagatctgcgtgatcaagctggagatcaaggacctg
aacgacaacgcgcccagcttccccacggaccagatcgagctggagatctcggagacggcc
agccccggcacccgggtgcccctggagagtgcctatgacccggactcgggcagctttggt
gtgcagagctatgagatcacccccaatgacctctttgggctggagaccaagacacggggt
gacggctcccgttttgctgagctggtggtggagaagagcctggaccgtgagacgcagtcc
cactacagctacgtgatcacggcgctggacggtggcgacccgcccaacttcggcacggtg
gagctcagcatccgcgtcatcgactccaacgacaacaacccgctcttcgaggagccagcc
tacaccgtcagcgtgcctgagaacgcccctccggggacgccggtcatccgcctcaacgcc
tctgacccggacgagggcaccaacggccaggtcctctactccttccacagctacgtctcc
gagcgggcccgggagctgttccagatcgacccccagagcggcctcatcactgtgagcggt
gccatcgactacgaggagggccacgtctacgagctggacgtgcaggccaaggacttgggg
cctaactccatccctgcccattgcaaagtgaccattagcgtccaggacgccaacgacaac
ccgcccctcatcaacctgctctctgtcaacagcgagctggtggaggtgagcgagaacgcc
ccgctgggctacgtcatcgccctggtgcgcgtctcggaccgcgactccggcgccaacggc
cgcgtgcagtgcaagctcctgggcaacgtgcctttccgcctgcaggagtacgagagcttc
tccaccatcctggtggacgggcggctggaccgggagcagagggaccagtacaacctcacc
atccaggccagggataacggcatcccttcgctgcaggccaccaagtctttcaccgtcaag
atcaccgatgagaacgacaaccatccccacttctccaagccctactaccaggtcattgtg
caggagaacaacaccccaggggcctacctgctctcggtgtcggcccgagaccctgacctg
ggcctcaatggcagcgtgtcctaccagatcgtgccctcgcaagtcagggacatgcctgtg
ttcacctatgtctccatcaaccccaactctggagatatctatgctttgaggtccttcaat
cacgaacagaccaaggcctttgagttcaaggtcttggcaaaagatgggggtaatccctct
ctgcagagcaacgccactgtcagggtgatcgtcctggacgtcaacgacaacacgccggtg
atcacggccccgccgctggtcaacgggacggcggaggtgtacatccccaggaacgcgggc
gttggctacctggtgaccgtggtcaaggcagatgactatgatgagggtgaaaatggcaga
ctttcctacgaaatggtggaaggagacagagggttttttgagatcgaccaggtcaatgga
gagataaggaccaccagagcctttggggagaacgccaaaacagcctatgagctcatcgtg
gtggctcacgaccatgggaaaacgtctctctcggcttctgccttgattttgatttacctg
tctccagccctggatgcccaggagtccataggatctgttaacctctccttgattttcatt
attgccctggggtctattgcagctattctttttgtcaccatgatctttgtggcagtcaag
tgcaaaagggataacaaggaaatcaggacctacaactgcaggatcgccgagtactcctac
gggcaccagaagaaatccagcaagaagaagaagatcagcaagaacgacatccgcctggtg
ccgcgggacgtggaggagacggacaaaatgaacgttgtgagctgctcctccctcacctcc
tccctcaactactttgactaccaccagcagacgctgcccctgggctgccgccgctccgag
agcaccttcctcaacgtggagagccagaacagccgcaacgccggctccaaccacatctac
cagcacggcttcacgggccagagccccccgcagcccgacctcatcatcaacggcatgccg
ctgccagagactgaaaactactcctttgattccaactacgtgaacagcagagctcattta
ataaaaagcagctccacgttcaaggacttggaggggaacagcctgaaggacagcggccac
gaggagagtgaccagacggacagcgagcacgacgtgcagcgggggctgtactgcgacacg
gccgtcaatgacgcgctcaacaccagcgtcccctccgtgggctcccagggccccgagcaa
gagcagagcgagggtttccactgccgggaggagtgccgcatcctgggccactcggaccgc
tgctggatgccgcgcggcgccgcgcccagccgcgccaagtcccccgagcacggccgcaac
gtcatcgccctgtccatcgaggcctcggcggcggacgcggagcattacgcagactgcagc
acaaaaaggaccttcgccaccttcggcaaggagggcggcgagcccgcggccgaggagcgg
cccgccaacgccaaggccaaacgaacggtggactcggccgcctgcagccccaaggtgagc
ggcgccgtgcgcgaggccggcaacggctgcgaggccgtcagccccgtcacctcgcccctg
cacctcaagagccccttggccaagccggccgtgccctacggcgccgggcactgccgggag
cgggagcccttcgggaccggcggcccttcgcgnnnnnnnnnnnnnnnnncccgcggcgcg
gacagcgagggcggcgggcacgagggcaacccgctgctgcaggagcgccgggagcgggac
aaggactcgcccggcgcccggagactgaaggacatcgtcctctga
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