Ficedula albicollis (collared flycatcher): 101813414
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Entry
101813414 CDS
T02815
Symbol
ERCC6L
Name
(RefSeq) ERCC excision repair 6 like, spindle assembly checkpoint helicase
KO
K20093
DNA excision repair protein ERCC-6-like [EC:5.6.2.-]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fab03036
]
101813414 (ERCC6L)
Chromosome and associated proteins [BR:
fab03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
101813414 (ERCC6L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
AAA_34
SWI2_SNF2
DEAD_2
TPR_1
TPR_2
Motif
Other DBs
NCBI-GeneID:
101813414
NCBI-ProteinID:
XP_005046320
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Position
4A:20748040..20752219
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AA seq
1267 aa
AA seq
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GLFRLAPAIRPSEKLQGRMQRVQEALAAAEQQQQEEQEEEEDEGFVDVCGSGLLIYGEMH
GKLFQHQREGVAFLYRLHRDGKPGGILADDMGLGKTIQVIAFLSGMFDAELVQHVLLVMP
TTLVSSWLAEFARWTPGLRVKEFHGTSKTERTRNLERVQRKNGIVITSYQMLINNWKQLA
SRHEQEFVWDYVILDEAHKIKCPSNKTTKCVYAIPARHRVLLTGTPVQNNLREMWSLFDF
ACQGSLLGTAKTFKMEYENPITRAREKDATPGEKALGLKMSENLMAIIKPYFLRRTKEDI
KSNHADKVDTPLPEDPSENKGPVMPSLTRKNDFVVWVYLAPVQEEIYRNFLCLDHVKEVL
TTTRSPLAELTVLKKLCDHPRLLSARACIQLGLEEQEGSEQDDRIEAGLFSGMSKIDHLS
DETVIQESGKMQFLVGLLERLREEGHRTLVFSQSRKMLDIIELVLCRRQFRVLRIDGTVT
QLTERERRINAFQSNPDYSVFLLTTQVGGVGITLTAASRVVIFDPSWNPATDAQAVDRAY
RIGQKENVVIYRLITCGTVEEKIYRRQVFKDSLIRQSTGDKKNPFRYFSKQELRELFTLE
DPRTSATQIQLQSLHAMQRKSDLQLDEHLAYLHSLAMFGISDHDLIYTRETAHEEKVESE
EAHQYIQRRVQKAHELVQLESQLRDQRMEGIRNACEENWQRPLGSVSGPKKLPPGLNDKN
NFVSPPVADAHKKDNVIDLTEDEAQVLDVSTKMTTLTVDDLDEEELAQDVSGMETEVLNT
SKTAEQSDIQESEQNPESSITPSSPALESQSLQEKQHSHIHSDSSAKARNDLAGHCQKQH
IHSDSSAKARNDLAGHCHNSSEAGMARLEDPRRDAELSVQVLDPHTALGTEQNNVPELAS
ASAVLSLSNVTTEINAELHKSHMLEDSLEGTSAPSLQDQVDFNLVLEESDEGWQDASNRE
ESVEHPEKESLQLQAESLCKSPDKESPNKALPSEPSSHGTAEEEPNASLQGSEPLDESSC
LFTFTRKRRLNRIASPSDSEGQPEQVPSSPLDSTQHGLPERISASTPKHDTRRAKAIFSP
QLNNSGNRSNASRRSFINRLVDEVEDIGEIMGTTDEEDSDDGDEEQDGLVEDEAEECTGE
SAEPEEEPTGETLDTSEESSPTDSVESEQSEAEETESSQEESTGDAELQSGEHIDYFTQE
STSAKGTGQSSSPAADYDTLVHSGKKLQNDGKLQEALDCFLQALDIKSGDPEVMLLTLNL
YRQLAQK
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
gggctgttccggctggcgcccgccatccgccccagcgagaagctgcagggccgcatgcag
cgggtgcaggaggcgctggcggcggccgagcagcagcagcaggaggagcaggaggaggag
gaggatgaaggcttcgtggacgtgtgcggcagcgggctgctgatctacggcgagatgcac
gggaagctgttccagcaccagcgggaaggtgtggcgttcctgtaccgcctgcaccgggac
ggcaagcctggtggcatcctggcagatgacatgggcctgggcaagaccatccaggtgatc
gccttcctctcgggcatgttcgacgccgagctggtgcagcacgtgctgctcgtcatgccc
accaccctggtcagcagctggctggctgagttcgcccgctggacccccggcctgcgcgtc
aaggaattccacggcaccagcaagaccgagcgcaccaggaacctggagagggtgcagagg
aagaacggcatcgtcatcacgagctaccagatgctcattaacaactggaagcagctggcc
agccgccacgagcaggagtttgtctgggactatgtcattctcgacgaagcgcacaagatc
aagtgcccgtcaaacaagacgaccaagtgcgtgtacgcaatcccggcccggcaccgcgtc
ctgctcacgggcacccccgtgcagaacaacctgcgcgaaatgtggtccttgtttgacttc
gcctgccaaggctccctcctgggaactgccaaaacttttaaaatggaatacgagaatccc
attaccagggcgagggagaaggatgcgactccaggtgagaaagcgctggggctaaagatg
tcagagaatctcatggcaattataaagccctatttcctcagaaggaccaaggaagacatc
aaaagcaatcatgctgataaagtggatactcctcttcctgaagatccaagtgagaacaag
ggtcctgtcatgccatctctcactaggaaaaatgactttgttgtgtgggtgtacctggca
ccggtgcaggaagaaatctacaggaactttctctgcctggatcacgtgaaggaagtactg
acgacgacccgatcgcctttggccgagctgacggtcctgaagaaactctgtgaccacccc
aggcttctgtctgcgagagcctgcatccagctgggcttggaagagcaggagggctctgag
caagatgacagaatagaagcaggtctgttttcaggcatgagcaaaatagatcatctctct
gacgagacagtgatccaggagtctgggaagatgcagttccttgtggggctgctggaacgg
ctgcgagaagaggggcaccgaacgctggtgttctcgcagtcgaggaagatgctggatatc
atcgagctggtgctgtgccgccggcagttccgggtgctgcgcatcgacggcacggtgacg
cagctgacggagcgcgagaggcgcatcaacgccttccagagcaaccccgactactcggtg
ttcctgctcaccacgcaggtcgggggcgtcgggataaccctgacggccgccagccgagtg
gtgatctttgatcccagctggaacccagccactgatgctcaggctgtggacagagcttac
agaatcgggcagaaggagaacgtggtgatttacaggctgatcacctgcggcactgtggaa
gagaaaatttacaggcggcaggtgttcaaggactcgctcattagacagagcaccggtgac
aaaaagaacccattccgttatttctccaaacaggagctgagggagctcttcacgctggaa
gaccctcggacgtctgccactcagatccagctgcagtccctgcacgccatgcaaaggaag
tcggacctgcagctggatgagcacctggcttacctgcactccctggcaatgttcggcatt
tctgaccacgacctgatctacacaagggagacggctcacgaggagaaggtggagagcgag
gaagcccatcagtacatccagaggagggtacagaaagcccacgagctggtccagctggag
tcccagctcagagaccagaggatggaggggatcagaaatgcttgtgaagagaactggcag
agaccactgggatcagtttctgggccaaagaagttgcctccagggttgaatgacaaaaat
aattttgtttcaccaccagtagctgatgcacataaaaaggacaacgttattgatcttaca
gaggatgaggcccaggtacttgatgtcagcaccaaaatgacaactctgactgttgatgac
ttggatgaagaggaactggcacaggatgtgtctggtatggagacagaagtgctcaatacc
agcaagacagcagaacaatctgatatacaagagtctgagcaaaatcctgaatctagcatt
acaccatcctcccctgcactcgagagtcagagcctccaagaaaaacagcattcgcacata
cattcagacagctcggccaaggcaaggaatgacctggctgggcattgtcagaaacagcac
atacattcagacagctcggccaaggcaaggaatgacctggctgggcattgtcacaattcc
tcagaggcaggcatggctagactagaagatcctagaagagatgcagaattgtcagttcag
gtacttgacccacacactgccctgggaacagagcagaacaatgtccctgagctggcttct
gcttctgcagtgctgagtttatcaaatgttacaacagagatcaatgctgagctccacaag
tctcacatgttggaagacagcttggaaggtacatctgctccttctctccaggatcaagtt
gacttcaatctggttttggaagagtctgacgagggatggcaggatgcctcaaatagagaa
gaatcagtggaacaccctgagaaggagagcttacaactgcaggcagaaagcttgtgtaaa
tctccagataaagaatctccaaacaaagctttgccaagtgagcccagtagccatggcaca
gctgaggaagagccaaatgcctccctgcaagggagtgaaccgttggatgaaagcagttgt
ctctttactttcacgaggaagagacgcttgaacagaattgcttcacccagtgacagtgaa
gggcagcctgagcaagtgccctcctctcccttggacagcactcagcacggacttccagaa
agaattagtgcttccacccctaaacatgacaccagaagagctaaagccatcttttctccc
cagctaaataacagtggaaacaggtctaatgcttccaggcgctcgttcatcaacaggctg
gtagatgaggtggaggatattggggaaatcatggggaccactgatgaagaagacagtgat
gatggtgatgaggagcaagacgggcttgtggaagacgaagctgaggagtgcactggcgaa
tctgctgagcctgaagaagaacctacaggagaaacacttgacacaagtgaggagtcctcc
cccacagacagcgtggagtctgagcagtccgaggcagaggagacagagtcatctcaggag
gaatccacgggtgatgctgagctccagtcaggcgagcacattgactacttcacccaggaa
agcacctctgcaaagggcactgggcagagctcctctcctgctgcagattatgacaccttg
gtacacagtgggaagaaacttcagaatgatggaaaactccaggaggccttggactgtttc
ctgcaagctctcgacatcaaaagtggagatcctgaagttatgcttctgactctgaacttg
tacagacagctggcccagaagtga
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