Ficedula albicollis (collared flycatcher): 101813441
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Entry
101813441 CDS
T02815
Symbol
RNPS1
Name
(RefSeq) RNA binding protein with serine rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03013
Nucleocytoplasmic transport
fab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101813441 (RNPS1)
03015 mRNA surveillance pathway
101813441 (RNPS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fab03019
]
101813441 (RNPS1)
Messenger RNA biogenesis [BR:
fab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101813441 (RNPS1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
RRM_ACIN1
RRM_MUD2_C
Motif
Other DBs
NCBI-GeneID:
101813441
NCBI-ProteinID:
XP_016157245
LinkDB
All DBs
Position
14:complement(335673..345763)
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AA seq
313 aa
AA seq
DB search
MKPFRPSRPRCDAITARRRFPFPRACVNLAAPSPTKRKDRSEEKSKDRSKDKAATKESGE
KDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSSSTGSSSGSSSSSASSRSGSSSTSRS
SSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPRPTKVHVGRLTRNVTK
DHIMEIFSTYGKIKMIDMPVDRLNPHLSKGYAYVEFENPDDAEKALKHMDGGQIDGQEIT
ATAVLAPRPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSRSPGR
RRHRSRSSSNSSR
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccttccgcccgtcccgcccccgctgtgacgccatcaccgcgcgccggcgcttc
cccttcccgcgcgcttgcgtcaatctcgcggctccctcaccaaccaagcgcaaggacagg
tctgaagagaagtccaaggaccggtccaaggataaagcagccactaaggagtcgggtgaa
aaggatcgtggtcgggacaagacacgcaaaagacgcagtgcttccagtgggagcagcagt
accagatcccgttccagctcaacttccagctcggggtccagttccagcaccggttctagc
agtggctcaagttcctcttctgcctcgagtcgctctgggagctccagcacctcacgcagt
tccagttccagcagctcttctggatctcccagtccctctcgacggagacatgacaacaga
agacggtcccgctccaagtccaaaccacccaagagagatgaaaaggagcggaagaggcgg
agcccatcacccagacccacaaaagtgcatgttgggaggctcactagaaacgtgaccaag
gatcacatcatggaaatcttttctacttacggaaagattaaaatgattgacatgccagtt
gacaggctaaacccacacctctccaaaggttatgcttatgtggagtttgagaacccagat
gatgctgagaaagccctgaaacacatggatggaggccagattgacggtcaggagatcaca
gccacagctgtgctggcaccacggcctcgaccacctcccagacgcttcagcccccccagg
aggatgctgccaccgccgccgatgtggcgccggtcaccccctcgcatgaggaggaggtcc
cggtctcctcggcgcaggtcccctgttcgccggcgatcccgatccaggtctcctggacga
aggcgccatcgcagccgctccagctcaaactcctcaagataa
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