Ficedula albicollis (collared flycatcher): 101813541
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Entry
101813541 CDS
T02815
Symbol
NPHP1
Name
(RefSeq) nephrocystin 1
KO
K19657
nephrocystin-1
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
fab03037
]
101813541 (NPHP1)
Cilium and associated proteins [BR:
fab03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
101813541 (NPHP1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_1
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
101813541
NCBI-ProteinID:
XP_005042745
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All DBs
Position
3:326930..340114
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AA seq
747 aa
AA seq
DB search
MRVEALRAESAAATPGQREELWLRCTQLKELVEENTKALHALKKADEPAPVGNYSQRKEE
EEKLLLKLSQQLQKLLLVLDQDNVTKSYAGDEEHQKGAHAEEGNEEEEESEDEESEEEDT
EEEEDDEEKLLDDPSVRECVAVGNFDAQQEGDLTFVKGEILLIHDKKADGWWVAENSKGE
RGLVPRTYLAVPKEEEESQEESEEHIEVVDETADGTEIKKRTDSHWSAVRAIAENDTVEV
LTTTGAVPAGFRPSMLFQLLQEGEEFRASHYLQPELTPSQLAFKDLVWNSEKNTIHARPT
RVSLIVTLCSCKMIPVPGTGVRVLSRHVRLCLFDGSRVLSNIHTVRATWLPKNPQTWTFS
PRVMGILPSLLDGDSFVRSNSLSSDIGILFELGITYKCNSTGERGELSCGWAFLKLFTSS
GIPVPSKMYELVLSGGTPYERGVEVDPSISRRAGSGVFQQLMSLRKQPVLLVKVKSPSVH
SKDILNFLPETLIGGMCYIHLLVFYRQILGDALLKDRMSMQSTDLICNPVLATFPQLLDQ
PDLMDALRSAWADKERTLKRIEKGEPVTGWYPVWLPVMMCFQQPAGESFPRIQKRLCMPT
ESSSLLQTLSFSPPTMCLGKGPQIPQISLPQTVVIPSFGTHTAGELTWLSLGSPTLVLPP
VPQTESSCRELNEKALGCQSWVSWEQQWDISFPVHAPESMHEDGSGLTHNKHPLSQSSFF
RAVHPKGKQVCSRNWQLPGIPEPASST
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgagggtggaggcgctgcgggcggagagcgcggctgccacccccgggcagcgagaggag
ctttggctgagatgtacacagctgaaggaattggtggaggagaatacaaaagctcttcat
gctttgaaaaaagctgacgagccagcacctgtggggaattacagccagaggaaggaagag
gaagaaaagctgttgctaaaactctcccagcagctgcagaaactccttcttgtcctggat
caggataatgtgacaaagagttatgcaggggatgaggaacaccagaaaggtgctcatgca
gaagagggaaatgaagaagaggaggagagtgaagatgaagaaagtgaggaggaagacact
gaagaagaagaagatgatgaggagaagctgttggatgatccaagtgttagagaatgtgtt
gctgttggaaactttgatgcccagcaggaaggggatctcacgtttgtgaaaggtgaaatc
ctgctcatacacgacaagaaggcggatggctggtgggtagctgaaaattccaagggggaa
agaggcctcgttcccaggacctacctggcggttcctaaagaagaggaagaaagccaggag
gagtcagaagaacacatagaagtggtggatgaaacagcagacggaactgaaattaaaaaa
agaacagattcccactggagtgctgtccgagccattgcagagaatgacactgtggaggtg
ctgaccaccacaggggcagttcctgcaggattccgcccatccatgcttttccagctcctg
caggaaggtgaagagtttcgagcaagtcactacttgcaacctgagcttaccccatcccag
ctggcttttaaagacttggtgtggaactctgagaaaaatactatccatgctagacccacc
agagtgtccctgattgtcactttatgcagctgcaagatgatccctgtgcctggaaccggc
gtgcgggtcctcagccggcacgtccggctctgcctcttcgacggcagccgggtgctgagt
aacatccacacagtgagagctacgtggctgcctaaaaatcctcaaacttggaccttttct
ccaagggtgatgggcatcttacccagcttgcttgatggtgactcttttgtcaggtccaac
tccctgtcttcagacattgggatattgtttgagcttggcatcacgtacaagtgcaactca
acaggtgaaagaggagagctgagctgtggctgggcctttctgaagcttttcacttccagt
gggattcctgttccttccaagatgtatgagctggtcctgagtggtggaactccctatgag
agaggtgttgaggttgacccatcaatatcaaggagagcaggctctggggttttccagcag
ttgatgagcctcaggaaacagcctgtgcttctggtgaaagtgaagtcaccaagtgtgcac
tcgaaagacatcctgaattttctccctgaaacattaattgggggcatgtgctacatccat
ctcctggtgttttatcggcaaatcctgggagatgccctcctgaaggacaggatgagcatg
cagagcacagacttgatctgcaatcctgttttagcaaccttccctcaactcctggatcag
ccagacctgatggatgcacttcggagtgcctgggcagacaaagaaagaacactgaagaga
attgagaagggagaacctgttacaggttggtacccagtgtggctccctgtcatgatgtgc
ttccaacagccagctggtgaaagctttccacggatacaaaagaggctgtgtatgcccaca
gaatcatcttctctcctccagactctgagcttcagtcctcccacaatgtgcctgggaaaa
ggcccccagattcctcagatctccctgccccagacagttgtaatcccaagttttggcacg
cacacagctggagaactgacctggctgtccctgggctcacccacacttgtcctacctccc
gtgccccagacagagagcagctgcagggagctgaatgagaaagcccttggctgtcagagc
tgggtttcctgggagcagcagtgggatatttcattccctgtgcacgctcctgaatcgatg
cacgaggatggctccgggcttacgcacaacaaacacccgctgagtcagagcagcttcttc
agggccgttcatccaaaaggaaagcaggtctgctcacggaattggcaactccccgggatc
ccagaaccagccagttctacctga
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