Ficedula albicollis (collared flycatcher): 101813668
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Entry
101813668 CDS
T02815
Name
(RefSeq) histidine--tRNA ligase, cytoplasmic
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
101813668
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fab01007
]
101813668
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fab03016
]
101813668
Enzymes [BR:
fab01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
101813668
Amino acid related enzymes [BR:
fab01007
]
Aminoacyl-tRNA synthetase
Class II (A)
101813668
Transfer RNA biogenesis [BR:
fab03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
101813668
Prokaryotic type
101813668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
WHEP-TRS
HGTP_anticodon2
tRNA-synt_2
tRNA-synt_2d
HHH_3
Topo-V_HhH_2_2nd
Motif
Other DBs
NCBI-GeneID:
101813668
NCBI-ProteinID:
XP_005062567
UniProt:
U3K2X0
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Position
Un
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AA seq
502 aa
AA seq
DB search
MAAEEAAVRAQADTVRRLKQDKADPDEIAKEVTKLLEMKAQLGADAGKHKFVLKTPKGTR
DFGPKEMAIREKAFRAIVSCFKRHGAEVIDTPVFELKETLTGKYGEDSKLIYDLKDQGGE
LLSLRYDLTVPFARYLAMNKITNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAGQFD
PMIPDAECLKIVHEILSDLQLGDFVIKVNDRRILDGMFAVCGVPDSKFRTICSSVDKLDK
MPWEEVRSEMVGEKGLSPEAADRIGEYVQLHGGLDLIERLLQDPKLSQNKLAKEGLGDMK
LLFEYLTLFGITGKISFDLSLARGLDYYTGVIFEAVLLQQDNEHGEEPVGVGSVAGGGRY
DGLVGMFDPKGRKVPCVGVSIGIERIFSILEQRLEASEEKVRTTETQVLVASAQKKLLEE
RLKLISELWDAGIKAEMLYKKNPKLLNQLQYCEDTGIPLVAIVGEQELKDGVVKLRIVAT
REEVNVRRESLVEEIRIRTSQC
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaggaggcggcggtgagggcccaggcggacaccgtgcggaggctcaaacag
gacaaggccgatcctgacgagattgcaaaggaagtgacaaagctgcttgagatgaaggca
cagctgggggcagatgcggggaaacacaagtttgtgctcaagaccccaaagggcacacgg
gattttggccctaaggaaatggccatccgtgagaaagccttcagagccattgtctcgtgc
ttcaagcgccatggagccgaagtcatcgacacgccggtgttcgagctgaaggagacactg
acagggaaatatggtgaagactcgaagctcatctatgatctaaaagatcagggaggagag
ctgctgtccctgcgctatgacctgacagtgccctttgctcgctacctggccatgaacaag
atcaccaacatcaagcgctaccacattgccaaggtgtacaggagggacaacccggccatg
accaggggccgctaccgcgagttctaccagtgtgattttgacatcgctgggcagtttgac
ccgatgattcctgacgctgagtgcctgaagattgtgcacgagatcctgagtgacctgcag
ctcggggactttgtcatcaaggtcaatgaccggcgcatccttgatgggatgtttgcagtt
tgtggggtcccggacagcaaattccgaaccatctgctctagcgttgacaaactggataag
atgccatgggaagaagtgaggagtgagatggtgggagagaaggggctctctcccgaggct
gcagatcgcatcggggagtatgtccagctccatggtgggctggacctgattgagcggctt
ctccaggacccaaagctatcccagaacaagctggccaaggaagggctgggggacatgaag
ctgctgtttgagtacctgaccctgtttggcatcacaggcaagatctccttcgacctgagc
ctggcgcggggcctggactattacacaggggtgatctttgaggctgtgctgctgcagcag
gacaacgagcacggggaggagccggtcggtgttgggagcgtggctggaggcggccgctac
gacgggctggtggggatgtttgatcccaagggcaggaaggtgccctgtgtgggggtcagc
attggcattgagcggatcttctccatcctggaacagagactggaggcctctgaggaaaag
gtcaggacaacggagacacaggtgctggtggcctctgcccaaaagaagctccttgaagag
cgactgaagctcatctctgagctgtgggatgctggaatcaaggcagagatgctgtacaag
aagaaccccaagctgctgaatcagctgcagtactgtgaggacacaggcatccctcttgtg
gccattgtgggtgagcaggagctcaaagatggagtcgtcaagctgcggatcgtggcaacc
agggaggaggtgaatgttcgcagggagagcctggtggaggagatcaggatacgaacgagt
cagtgttaa
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