Ficedula albicollis (collared flycatcher): 101813856
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Entry
101813856 CDS
T02815
Symbol
ZC3H12A
Name
(RefSeq) zinc finger CCCH-type containing 12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fab03019
]
101813856 (ZC3H12A)
Messenger RNA biogenesis [BR:
fab03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
101813856 (ZC3H12A)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
101813856
NCBI-ProteinID:
XP_005058370
UniProt:
U3JDR7
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Position
23:complement(3731383..3739328)
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AA seq
602 aa
AA seq
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MSGTESPERPGDGPELQLKVDFFRKLGYSSEEIRVVLQKLGLGADTNTVLGELVKHGPAE
RDGPETPPEPGEAPLVPRGGAANKPPAPGPEETESDNLKPIVIDGSNVAMSHGNKEVFSC
RGILLAVQWFWDRGHKDITVFVPSWRKEQPRPDVLITDQHILRELEKKKILVFTPSRRVG
GKRVVCYDDRFIVKLAHESDGVVVSNDTYRDLQSERPEWKKFIEERLLMYSFVNDKFMPP
DDPLGRHGPSLDNFLRKKPVVPEHKKQQCPYGKKCTYGIKCKFYHPERINQPQRSLADEL
RANARLSPTRSSCAKEEKKGKRGSQAELLCSVPTESDKSSLQKVSAERKSLAHKAKPGDV
VLQAKGCVSGSVSPDRYQQPPMDSLSYISQERLDSGIGSLENQLSDMWPHRCASHCDHPH
AEQVAVCTCGRQRPVYPHSPSLEQNGLVSYKHASHKSSSSGASFLQYSPEMSRSGAPHSF
SGYGVPVHTGPAGQYSLPGEFSAALPSSREFWSEPYPLPQVRSPCVPSPHTVQRAPGPAC
GDSGPWAGSEQFAEERASVHVKLCGIFHPHLVDAVMSRFPRLLDPQRLAAEILTYKAQNP
GM
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcaccgagagccccgagcggcccggcgacggccccgagctgcagctcaaggtg
gattttttccgcaagctcggctactcctcggaggagatccgcgtggtgctgcagaagctg
ggcctgggcgccgacaccaacacggtgctgggggagctggtgaagcacggcccggccgag
cgggacggacccgagaccccgcccgagcccggcgaggccccgctggtccctcggggcggc
gccgccaacaaaccccccgcgcccggccccgaggagacggagagcgacaacctgaagccc
atcgtcatcgatggcagcaacgtggccatgagccatggaaataaagaagtgttctcctgc
cgaggtatccttctggctgtccagtggttctgggacaggggacacaaggatattacagtc
tttgtgccatcatggaggaaggagcagccccgaccagatgtgctcataacagaccagcac
atcctgcgggagctggagaagaagaagatcctggtgttcacgccgtcgcggcgcgtgggc
ggcaagcgcgtggtgtgctacgacgaccgcttcatcgtgaagctggcgcacgagtccgac
ggcgtggtggtgtccaacgacacctaccgcgacctgcagagcgagcggcccgagtggaag
aagttcatcgaggagcgcctgctgatgtattcctttgttaatgacaagtttatgcctcca
gatgatcccttagggcgtcacggccccagcctggacaacttcctcaggaagaaacctgta
gttccagaacacaagaaacagcagtgtccttatgggaaaaaatgcacttatggaattaag
tgtaagttctaccatcctgaaaggatcaaccagccccagcgctcattagctgatgagctc
cgtgccaatgcaaggctgtctccaaccagaagcagctgtgccaaggaggagaaaaagggg
aaacggggttcccaggcagagctcttgtgctctgtgcccacagagagtgacaaaagctct
ttacagaaggtctctgcagagaggaagagcttggcccacaaagccaagcccggtgacgtt
gtgcttcaggccaaaggctgtgtgtcaggcagtgtttcccctgacaggtaccagcagcct
cccatggactctctgtcttacatctctcaggagcgtctcgactcgggcatcggctctctg
gagaaccagctgtctgacatgtggcctcacagatgtgccagtcactgtgaccatccccat
gcagagcaggtggctgtctgcacctgtggtaggcagagacctgtctacccacattccccc
agcttggagcagaacggtctggtctcttacaagcacgcatcccataaatcctcttcctct
ggtgctagcttcttgcagtacagccccgagatgtctcgctcaggagcaccccactctttc
tcaggctatggggtgcctgtgcacacaggtcctgcagggcagtacagcctgcctggtgag
ttcagtgctgccctgcccagctcgagggagttctggtcagagccctacccgctgccacag
gtgagatccccgtgtgtgcccagcccccacacggtgcagagagccccaggcccagcctgt
ggggactcagggccctgggctggctcagagcagtttgctgaggagagggccagcgtgcat
gtcaagctctgtggcatcttccacccacacctggtggatgctgtgatgagccgcttcccc
cggctgctggacccccagcggctggcagcagagatcctcacctacaaggcccagaacccg
gggatgtga
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