Ficedula albicollis (collared flycatcher): 101813959
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Entry
101813959 CDS
T02815
Symbol
DDB2
Name
(RefSeq) damage specific DNA binding protein 2
KO
K10140
DNA damage-binding protein 2
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03420
Nucleotide excision repair
fab04115
p53 signaling pathway
fab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101813959 (DDB2)
09124 Replication and repair
03420 Nucleotide excision repair
101813959 (DDB2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
101813959 (DDB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fab04121
]
101813959 (DDB2)
03400 DNA repair and recombination proteins [BR:
fab03400
]
101813959 (DDB2)
Ubiquitin system [BR:
fab04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
101813959 (DDB2)
DNA repair and recombination proteins [BR:
fab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
101813959 (DDB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_EIPR1
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
WD40_RFWD3
PEP5_VPS11_N
Frtz
Motif
Other DBs
NCBI-GeneID:
101813959
NCBI-ProteinID:
XP_016154000
LinkDB
All DBs
Position
5:complement(23985868..23999744)
Genome browser
AA seq
463 aa
AA seq
DB search
MAPVNQPKDKKRERACQQWPEEAKSAGKRKRDYGERGNEKQEKKLFVRKTSKPSGKVDCS
GSGFVMRNKRALPSQLERRCSIVHYVYQKMLGGSIQAQLRQRLELAFLHSLSSYCLFRRA
SPFDRRVTCLEWHPTHPSTLAVGSKGGDIILWDCEVLAKTCFIRGKGPGDSLGDIKFRPF
EAEKLYVASGDGTLSLQDLEGRAVQVISRALDCGHEHHNVCCWYCSVDVSASCRVVVTGD
NVGNVVLLSTSGEEIWKLKLHKKKVTHVEFNSRCEWMFATASVDQTVKIWDLRNIKNKTN
FLHLLPHEKPVNAAYFSPTHGAKLLSTDQHNEIRVYSSSDWTKPQHLIPHPHRQFQHLTP
IKATWHPRYDLIVVGRYPDPKFPGYTLNELRTVDVFDGNTGQMVCQLYDPNASGIISLNK
FNPMGDTLASGMGFNILIWNQEEMAAKKHERLLKAMTDTEMES
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggctccagtgaaccagccaaaggacaagaagcgtgagagggcatgtcagcagtggcca
gaagaggcaaaatcagctgggaagaggaagcgggactatggagaaagagggaatgagaaa
caagaaaagaagttgtttgtgagaaaaacatctaaaccctcagggaaagttgattgcagt
ggaagtggatttgtgatgagaaacaagagagcccttccctctcagctggagcggcgatgc
agcattgttcattatgtctaccagaaaatgctgggaggctccattcaggcacagctcagg
cagagattggagctggcttttctgcattctctttcctcatactgcctcttccgaagagca
agtccctttgacaggagagtgacatgtctggaatggcacccaacacaccccagtacgcta
gctgtcggttccaaaggtggagacatcatcctttgggactgtgaagtacttgctaaaacc
tgcttcataagggggaaagggccaggagattctctcggagacatcaagttcaggcctttt
gaggcagagaagctttatgtggcatcaggtgatggcaccctaagtctgcaggatcttgag
ggcagagcggtgcaggtgatctctcgtgccctggactgtggccacgagcatcataatgtt
tgttgctggtactgcagtgtggacgtttctgcaagctgccgtgtagtggtgacaggtgat
aatgtgggcaacgtggtcctgctcagcacttctggtgaagagatctggaagctgaaattg
cacaagaagaaagtgactcatgtagagtttaactcccgatgtgagtggatgtttgccaca
gcatccgtggatcagacagtcaaaatctgggacctcagaaacatcaaaaataaaacaaac
tttcttcatctgcttccacatgagaaacctgtcaatgcagcttacttcagcccaacacat
ggtgccaagcttctgagcacagaccagcacaatgaaatcagggtttactcatcttcagac
tggaccaagccacagcatctgattccacatccacataggcagtttcagcacctcacacct
attaaggcgacgtggcatcctcgctatgacctcattgtcgtaggtcgctacccagacccc
aagttccctgggtacacgctgaacgagctgcgaactgtggatgtgttcgatggcaacacc
ggccagatggtttgccagctctacgatccaaatgcttctggcatcatctcgctcaataaa
tttaaccctatgggagacacactggcttctggcatgggctttaatattctgatctggaac
caggaggagatggcagccaagaagcatgaacgtcttttgaaagccatgacagacacagag
atggaatcatga
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