Ficedula albicollis (collared flycatcher): 101813966
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Entry
101813966 CDS
T02815
Symbol
TSPEAR
Name
(RefSeq) thrombospondin type laminin G domain and EAR repeats
KO
K24437
thrombospondin-type laminin G domain and EAR repeat-containing protein
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
fab03037
]
101813966 (TSPEAR)
04990 Domain-containing proteins not elsewhere classified [BR:
fab04990
]
101813966 (TSPEAR)
Cilium and associated proteins [BR:
fab03037
]
Other cilia and associated proteins
Stereociliary proteins
101813966 (TSPEAR)
Domain-containing proteins not elsewhere classified [BR:
fab04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
101813966 (TSPEAR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPTP
Laminin_G_2
Laminin_G_3
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
101813966
NCBI-ProteinID:
XP_005050825
UniProt:
U3JL16
LinkDB
All DBs
Position
9:4490840..4503446
Genome browser
AA seq
675 aa
AA seq
DB search
MSAPLLLWVILLRWAGGGGCARPGRTWQHCTDLRPLDILSEAVPAAGLARGMRVFQVQGV
RGFQLSSSRPRALGFPASRLFIHCDRFPEEFSIIVTLRALRGPAKRNEYIFTLMLEESPS
VLVGLRYAPDKLHFLFWSQERAGGWQTRVTFPNVSLSDNQWHTLILAVSGQSFSLTVDCS
IPKDVVVETPFPASLSVRRASFYLGNRRRRKGVFTGLLRQLVLLPGADATPRMCHAVNFK
VATLSVPTVLQDVPAKPVSNEVLKHAYESDMKVTLGARPRCSKQEKAQFWFNASRRGLYL
CNGSTWLSVLEVQHRLDYVEEYQNLVTNSETMGIEVFSIPKVGLFAAVANRITPPGSAIY
RWMDGKFVHYQNIPTHQAQSWKYFTIGKKIFLAVANFEQNERGQEFSVIYKWSRRKAKFI
TYQRISTHSARDWEAFVIEGEAFLAVVNHREGNNHNIDSVIYRWNPRTGLFETNQTIPTS
GAYDWEFFTIGPYSFLAVANTFNGTSTKIYSHIYIWLSGSFQLFQSILTFGAADWEVFHI
GDRVFLAVANSHSYDSGMPAPSNFYAINSSIYELNITAQMFVKFQDLLTYSALDWEFFSV
GDDSFLVVANSFDGFTFSVNSIIYRWQGYEGFVAAHHLPTVGCRDWEAFHTAEGSYLFYS
SAKEPLSKVLKLKTT
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcaccgctgctgctctgggtcatcctgctgcgctgggccggcggagggggctgc
gcccggccgggcaggacgtggcagcactgcacagacctgcggcccctggacatcctctcg
gaggcggtgccggccgcggggctggcccggggcatgcgggtgttccaggtgcagggcgtg
cgcggcttccagctctcctcatcgcggccccgcgccctgggcttcccggcatcgcggctc
ttcatccactgcgaccgcttccccgaggagttctccatcatcgtcacgctgcgggcgctg
cgcggccccgccaagaggaacgagtacatcttcacgctgatgctggaggagagccccagc
gtgctggtggggctgcgctacgcccccgacaagctgcatttcctcttctggagccaggag
cgcgccggcggctggcagacgcgtgtcaccttccccaacgtgtccctctccgacaaccag
tggcacacgctcatcctggctgtctccggccagtccttctccttgacggtggactgcagc
atccccaaggatgtggtggtggagacaccgtttccagcctcgctgtcggtgaggagagcc
agcttctacctgggcaacaggaggagaaggaaaggcgtgttcacgggcttgctgagacag
cttgtcctgctgccaggagctgatgccaccccccggatgtgccacgccgtgaacttcaaa
gtagcaacgctgtctgtgcccactgtcctccaggatgtccctgccaagccagtgagcaac
gaggtgctcaaacacgcctacgagagtgacatgaaggtgaccctgggggcgcggccacgc
tgctccaagcaggagaaggcgcagttctggttcaacgcctcccggcgagggctctacctg
tgcaacggcagcacctggctctccgtgctggaagtccaacacaggctggactatgtggag
gaataccagaacctggtgaccaactcagagacaatgggcattgaggtgttcagcatccca
aaggtgggactgtttgcagccgtggccaacaggatcacgcccccaggatcagccatctac
aggtggatggacgggaagtttgtgcactaccagaacatccccacccaccaggctcagtcc
tggaagtatttcaccattgggaagaagatcttcctggcagtggcgaattttgagcagaac
gagaggggccaggagttctctgtgatctacaagtggagccgcaggaaagccaagttcatc
acgtaccagcggatcagcacgcacagcgccagggactgggaggcctttgtcatcgaggga
gaggctttccttgctgtggtcaaccacagggaagggaacaaccacaacatagacagtgtg
atatacaggtggaaccccaggacagggctgtttgagaccaaccagaccattcctacctct
ggagcctacgactgggaatttttcaccatcggaccgtattccttcctggctgtagctaac
acattcaatggcacgtccaccaagatctactcacacatctacatctggctcagtggctcc
ttccagctcttccagtctatcctgacatttggtgcagctgactgggaggtttttcatatt
ggggacagagtttttctggctgttgccaacagccacagctatgacagcgggatgccagca
ccctccaacttctatgccatcaactcctccatctatgagctgaacatcacggcccagatg
tttgttaaattccaggaccttctcacctacagtgccctggactgggagttcttctcagtg
ggagacgactctttcctggtggtggcaaactcctttgatggcttcaccttctctgtcaac
agcatcatctacaggtggcaaggctatgaaggctttgtggcagcccaccacctccccacc
gtcggctgcagagactgggaggcgtttcacaccgctgagggctcctacctgttctactcc
agcgccaaggagcccctctccaaggtgctcaagctgaaaaccacctga
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