Ficedula albicollis (collared flycatcher): 101814240
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Entry
101814240 CDS
T02815
Symbol
SEC16A
Name
(RefSeq) SEC16 homolog A, endoplasmic reticulum export factor
KO
K20353
COPII coat assembly protein SEC16
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fab04131
]
101814240 (SEC16A)
Membrane trafficking [BR:
fab04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
101814240 (SEC16A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
101814240
NCBI-ProteinID:
XP_005055710
UniProt:
U3JGA6
LinkDB
All DBs
Position
17:9493372..9518026
Genome browser
AA seq
2416 aa
AA seq
DB search
MQQPPQPVPPGAAPPPPTVARNMYWRNSPLGKRANAAAAPVQPVTDPFAFGRQTPQGSSP
ENPSKGSAPAFPQPALLHPPPPRGGDSPHGPHAAPVAQAGSGTSTFSNVPVPSPSLGYVI
NSAAEGHPSADLGLRGPAVPVHYNPGAAVENSFSVHPGMVSAGSKPGARQDVGRDPSDAP
AAPSTAALFPPPPQQPGPQWRPVPGNLQSPIRNFVPYPEPSPQTDVQNISQPSVSASHPP
PHTNVPQGPGHQGIPQNIVQAPLPAGCEKSGKNGPANSSHHMNSIQPGNVFRQNTEMGNP
WLSQPYQEQFYPQPPLQDSGFVLSTAQENNPKNQSPAMSETSNRSIPTDRDPGTLSMFFK
GDEAENEEILSSEKNYVMEKTEFDACQQNSASLYHQPVHPQQVATNIVSQAQLGAGSAGE
MVQKGMDGQYFPKLVSHQEAAKHSLFAGDDKAQIGDTAAGSQYENVENLECIQNQEVLPS
EPQNVKASSPAAGPDPYRYGSFPGQLLPQNAAEGGPNLEAPDSLPHPGRPDSVSSSYSSI
SHRSTSSSARPPEQVGTFIQQEIGKPDEESSASFFKQIDSSPLGGDSGELNLSKNYHGNL
SQPPTPSPPKPTGVFQTSANSSFEPVRSHGVGIKPAEIDQAKMVVELRENHSNQKNIKKS
TAVPAASPGNLEQPPDNLETIYMPQVHPGPLAGTGEAGNTLHSGPVVENIQSVSERRSST
RAQGAVKKCDSPATTLWAHNELPNFGGNVLLAPAAPAVYVPAKQSVEVIQPPEEGLSNQQ
PCKPGTIAVQHSQDGNITFENLENPPKMGEEEALQSQASSGYASLLSSPPTESLQNQPIL
IAQPNQSYNLAQPINFSISLSNQLSNNENNLPMKDSGVGDKPAMGPQTSHAGGENMPLPV
MQVGSLLVNALPNTNLLKHNLLQSPGNSSDAASNQPANLLMKTPLNLTPEGQKNVNMEGL
APEFAGKPGVSPGTSLPSGSASGLVPPVNSIAQANNSANQSSSKEAAGVLDFTVSRTLEK
SSTSNSVQVHNQPPSAAPVQQAASGAGQVPDKQHFYQQVTKDAQHQAVAQGALPPQPQMQ
AAQMQPPTSGQSSVPPDSQISTGAKAMQQGENHVLGNRPQPGRPQEAGSAQPRYDQTSPG
KQPVSEQPPGAPAATAPPATTAQAVPPNGQQDLQRPPPPQTPQEAFGPPQNPYYYYRHPY
DAYQAPYPPPYPPADPRTAAHLYYMEDSYGQYDPRYRHYDSSSAYAEPGSYRYPEPERPS
SRASHCSDRPSSRQGYPEDYYGKSGWSDYYSGYYPNSYDYGDPSHWERYPYDPRYREYPY
DPRYRDPRSYDQRYWYDAEHNPYQKREAYPYGSRSERYEENWRYDPRFAGSFDDDSEPQR
DPYGDDFERRSVHSEHSGHSLRSSRSVHSHRSSFSSRSQQSQLYRSNHDLTGNAYEPPAQ
AASLHAEYPYGGFDPSFDGQQPFPDYGYPAETGWAAVEQAPLRPSTPEKFSVPHICARFG
PGGFLIKALPNLPSEGQPALVEIHSMETMLQHSPEQEEMRAFPGPLAKDETHKVDVINFA
QSKAAQCFKNENLIDKESASLLWDFIVLLCRQNGTVVGTDLAELLLRDHKTVWLPGKSPN
EANLIDFTNEALEQVEEESGEAQLSFLTDNLLTTVDSFEKETERFRELLLYGRKKDALES
AMKHGLWGHALLLASKMDSRTHARVMTRFANSLPINDPLQTVYQLMSGRMPAASTCCGDE
KWGDWRPHLAMVLSNLTNNVDLESRTIATMGDTLASKGLLDAAHFCYLMAQVGFGVYTRK
TTKLVLIGSNHSLPFLKFATNEAIQRTEAYEYAQSLGSQPGCLPNFQVFKFIYACRLAEM
GLAAQAFHYCEIISRTVLKDPHYYSPVLIGQLIQMSSQLRLFDPQIKEKPDQESFIEPSW
LVTLRHVDGQIKEGAIAYNTDRSTPPPYECSTPSSELDRASQCDGGGGREVGPGAENALL
ASLLPNMAQQMQSVQLMPSVPQAVLDGSAAMIPPGDQGSVPFYPVAPQPLGPGPGFAPQG
FSHPYGTEPSPLYLGSALPPGGPPQEVEPQPEEQTKLETGMQRIAPESPPQNSFPEQRED
DFYGRMANMGYGQRSRTTSESSAHSVGRERSNSAAKQPSPPPSAPAGKETKKETKKEAAP
RKTGATWFRWLMGKGKNEAHLPDDKNKSIVWDEQKQRWVNLDEPEEESKPPPPPPTGFPK
APQAAPPGPGAPPGASVNVFSRRAAGSRARYVDVLNPGGTKASGAVPAPSDLFAPLAPMP
IPANVFVPNSVPGESQPMEGSGAAEQTPTANQTNTDPAAAVEPEYLNPAALPPGSGLHVP
NPDGSQSGELSRSSSMSSLSREVSQHFNQAAAVPPSGTPSAGAVPFYNPSQFAQSPAATG
SSRLGRIGQRKYPTLK
NT seq
7251 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagccaccgcagcccgtccctccgggggcggctcctcctccccccaccgtggct
cgcaacatgtactggaggaacagcccgctgggcaaacgggccaacgccgcggcagcgccg
gtgcagcccgtgacagacccgtttgctttcggcaggcaaacgccgcagggctcctctccg
gagaatccatccaagggcagcgccccggccttcccgcagccagccctgctgcatcccccg
cccccccgaggcggggacagccctcacggaccacacgcagctcctgtggctcaggcaggg
agcggcaccagtaccttttctaatgttccagttccttctccgtccctgggctatgttata
aatagtgctgcagaaggacatcccagtgctgatctcggactccgtgggcctgcagtgccg
gtgcattataacccaggagcagcggtggaaaattctttcagtgtgcatcctggaatggtg
tctgcagggagcaaacctggagctaggcaggatgttggtagagatccaagtgatgcacct
gcagcacccagcacagcagcactcttcccaccgccgccccagcagcctgggccccagtgg
aggcctgtcccggggaatctgcagtctccaattcggaattttgtgccctatcctgagccg
tctcctcagactgatgttcagaacatttcccagccttctgtcagtgcttctcaccctcct
ccacacacaaatgtcccgcagggtcctgggcatcaagggattccacaaaacatcgtgcaa
gcgcctttacctgctggttgtgagaagagtggcaaaaatgggcctgcaaacagcagtcat
cacatgaacagcatccagccaggaaatgtgtttaggcagaacacagaaatgggtaaccct
tggttaagccaaccttaccaggagcagttttacccacagccacctttgcaagactctggt
tttgtcctttccacagctcaggaaaacaaccccaaaaaccagtctccagctatgtctgaa
acatcaaatagatctattcccacagatcgagatccaggaacgctctccatgttttttaaa
ggggatgaggcagaaaatgaagaaatactttcatctgaaaaaaattatgtaatggagaaa
acagagtttgatgcctgtcagcaaaattcagcctccctgtatcaccagcctgtgcatcct
cagcaggtggcaaccaacattgtctctcaggcacagctgggtgcaggctcagctggtgag
atggtacagaagggaatggatggccagtacttccctaaacttgtcagccatcaggaggct
gctaaacactctctgtttgctggcgatgacaaggcacagataggtgacacagctgctggg
tcccagtacgaaaacgtggagaacctggagtgcattcagaaccaggaggtgctgccaagc
gaaccacagaacgtgaaggcttcatcccccgctgctggtcccgacccgtacaggtacggg
tccttcccgggccagctgcttccccagaacgctgctgaggggggaccaaacctggaggca
cctgattccttacctcaccccggccggccagacagcgtctcttccagctacagcagcatc
agccacaggagcacttccagctcagcacggcccccagagcaggttggtacattcatccag
caggaaattgggaagcctgatgaggaatcctctgccagcttcttcaaacagattgactcc
tctcctctgggaggtgattcaggtgagctaaacctgagcaagaactaccacggcaatcta
tcccagcctcccactccaagtcctcctaagcctacaggagtgtttcagacaagtgcaaat
agttcttttgaaccagtgaggtcccatggagttggtataaaacctgcagagattgaccaa
gcaaagatggtggttgaattaagagagaaccactcaaaccaaaagaatatcaagaagagc
actgcggtgcctgctgcttcccctggcaatcttgaacagccaccagataatctggaaaca
atttacatgcctcaggtacacccagggcctcttgcaggcactggggaagctggaaacacg
ctgcactctgggcctgttgtggaaaatatacaatcagtatctgagagacggtcctcaacc
agagctcagggagcagttaagaagtgtgatagcccagctacgactttatgggctcacaat
gagttaccaaattttggggggaatgttctcctagctcctgcagctcctgcagtgtatgta
cctgccaaacaaagtgtggaagtcatccagccaccagaagaaggcctgtctaatcagcag
ccatgtaaaccagggactattgctgtgcagcactcccaggatggaaatataacttttgaa
aatcttgagaatcctcccaaaatgggagaagaggaagcacttcagtctcaggcaagttct
ggttatgcaagtttattgtcctctccacctacagagtctttgcaaaatcagcctatcctg
attgctcagcctaatcaaagctataacttggctcagccaattaatttttctatttctcta
tctaatcagctaagcaacaatgaaaacaatctgccaatgaaggactctggagttggggac
aagcctgcaatgggtccccaaacttcacatgctggtggggaaaacatgccgttacctgtg
atgcaagttggatctctgttagtcaatgcacttccaaatactaatctgttaaaacataat
ttattacaaagtcctggtaattcttctgatgctgcttctaatcagcctgcaaacttgctt
atgaaaactcctcttaatttgactccagaagggcaaaagaatgttaatatggaaggcctt
gctcctgaatttgctggcaagccaggggtttctcctgggacgagtcttcccagtggaagt
gcaagtggcctagtcccccctgttaattccatagcacaggctaataattctgcaaaccaa
tcaagtagcaaagaagctgctggagtgcttgacttcacagtgtcacggacgttggagaaa
agcagcacaagtaattcagtgcaggtccacaatcagcctccctctgctgctccagtccaa
caggcagccagtggtgctgggcaggtgcctgacaaacaacatttctatcaacaggtgaca
aaagatgcgcagcaccaggctgtagcacagggagctctgccaccccaaccacaaatgcaa
gcagctcaaatgcagccaccaacatctgggcagtcctcagttcctccagactcccagatt
tccacaggggctaaagccatgcagcagggggagaaccatgtgctgggtaatcgtccccag
cctgggaggccccaggaggcaggttcagcccagccaaggtacgaccagaccagtcctggg
aagcagccagtgtcagaacagcctccaggagctccagctgccacagcccctcctgccacc
actgctcaggcagtgccacccaacgggcagcaagacctgcagcgtccaccccctcctcag
acccctcaggaagcctttggtcccccccagaacccttactactactacagacatccttac
gatgcttaccaggccccatatccaccaccttatcctcctgcagaccccaggacagcagct
cacctttattacatggaggacagctatgggcagtacgacccccggtaccgacactacgac
agcagcagcgcctacgcggagcccggcagttaccgctaccccgagcctgagcggcccagc
tccagggccagccactgctctgacagaccctcctccaggcaagggtatccagaagattat
tatggaaaaagtggatggagtgattattattcaggctattacccaaactcttatgattat
ggagatccaagtcactgggaacgatacccatatgaccccaggtacagagaatacccgtat
gaccccaggtacagagaccccagaagttatgaccagaggtactggtatgatgctgagcac
aacccttaccagaagagagaagcatatccatacggcagcaggagcgagcggtacgaggag
aactggcgatacgacccgcgtttcgcgggcagctttgacgacgactcggagccgcagcgg
gacccctacggcgacgactttgagcggcgcagcgtgcacagcgagcactcgggccacagc
ctgcgcagctcccgcagcgtgcacagccaccgcagcagcttcagctcccgctcccagcag
agccagctgtacaggagcaatcacgacctcacaggtaatgcctatgaaccccctgcgcag
gcagcctcgctccacgcagagtatccctacggaggctttgatcccagctttgatggacag
cagcccttcccagactatggctaccctgctgaaacgggctgggcagctgtggaacaagca
cctttaaggccctcaacacctgagaaattttcagtgcctcatatctgtgccaggtttggg
cctgggggtttcctaataaaagctctgccaaacctgccttctgagggtcagccagctctg
gttgaaatccacagcatggagactatgttacaacattctccagagcaagaagagatgaga
gcctttcctggtcctcttgctaaggatgagacacataaagtggatgttattaattttgca
caaagtaaagctgcacagtgctttaagaatgaaaatttaattgacaaagaatctgcaagt
cttctttgggactttattgtactgttgtgcaggcagaatgggactgttgtgggaacagac
ctggctgaacttctgctccgagatcataaaacagtgtggcttcctgggaagtcccctaat
gaggcaaatttgattgatttcactaatgaggctttggaacaagtggaagaggaatctggt
gaagcccagctctcttttctcactgataatcttctaaccacagttgacagttttgagaag
gagactgagagattcagggagttgctgctttatggccgtaagaaagatgctttggagtct
gccatgaagcatggtttgtggggtcatgctctgctccttgccagcaaaatggacagcagg
acacatgcaagagtgatgaccagatttgccaacagtctcccaattaatgaccctctgcag
actgtttaccagctcatgtctggaaggatgccagctgcatccacgtgctgtggagatgag
aaatggggagactggaggcctcatctagcaatggtgttatccaacctgaccaataatgtg
gacttggaatccaggaccattgctaccatgggagacactcttgcttctaaaggcctgctg
gatgctgctcatttttgttaccttatggcccaggttgggtttggagtttacacaaggaag
acaacaaagcttgtcctaattggatcaaatcacagtttgccatttttaaagtttgccacc
aatgaagccattcaaagaacagaagcctatgaatatgcacagtcactaggaagtcagcct
ggctgcttgcccaatttccaggttttcaagttcatctatgcctgtcggctggctgagatg
ggccttgctgcccaggctttccactactgtgaaatcatttccagaactgtcctcaaagac
ccacattactattcccctgtgctgattggccagctaatccagatgtcatcccagctgcgc
ctgtttgaccctcagataaaagaaaaaccagatcaggaatcttttattgaaccctcctgg
ttagtgacacttcgacatgtggatggacagatcaaggagggtgcaatagcctacaacaca
gacagatccactccccctccctatgaatgcagcactcccagctctgagctggaccgtgcc
agtcagtgtgatgggggaggaggccgtgaggtggggccaggtgctgagaacgccttgctg
gcatccttgttacccaatatggctcaacagatgcagagcgtgcagctgatgccttcagta
cctcaggctgtccttgatggctcagctgccatgattcctcctggtgaccagggaagtgtc
cccttctacccagttgctcctcagcctcttggcccaggtcctggctttgcacctcaagga
ttttcacatccctatggaactgaaccatccccactgtatttagggtcagctctaccccca
ggagggccaccacaagaagtggaaccacagccagaagagcagacaaaactggaaacagga
atgcagagaattgccccagagtctcctccacaaaactccttccctgaacagagagaggat
gatttctatggcagaatggccaacatgggctatgggcaaagatcccgaacaacctcagag
tcctctgctcattctgtgggacgagagagatccaactctgcagcaaaacaaccctctcct
cctccctctgctcctgcagggaaagagaccaaaaaagaaacaaaaaaggaggcagcacct
agaaagactggtgcaacgtggtttcgctggctgatggggaaaggaaagaatgaggctcac
ctgccagatgacaagaacaaatcaattgtttgggatgagcagaaacaacgttgggttaat
ctggatgaaccagaagaagagagtaaacctcctccaccacctccaacaggatttcctaaa
gctcctcaggctgctccccctgggcctggagccccacctggtgcctctgtcaacgtgttc
tccaggagagcagctgggagcagagcccgttatgtggatgtcctgaatccaggaggaacc
aaggcaagtggggctgttcctgcaccatcagacctgtttgcccccctggcaccaatgccc
attcctgccaacgtgtttgttccaaactcagttccaggggaatcccagcccatggaaggg
agtggagcagcagagcaaacaccaactgcaaaccaaaccaacacagaccctgctgcagct
gtggaaccagagtacttaaaccctgcagcccttcctcctggatctggacttcatgttcct
aaccctgatggctcccagtcaggcgagctttcgcgctctagttcaatgagttcattatca
cgtgaagtaagccagcattttaatcaggctgctgctgttccaccctcggggacaccttca
gcaggagcggtaccgttctacaacccctctcaatttgcacaatctcctgcagccactgga
agttcaagactgggaagaattggacagaggaagtatccaacgttgaagtag
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