Ficedula albicollis (collared flycatcher): 101814405
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Entry
101814405 CDS
T02815
Symbol
ZC3H12D
Name
(RefSeq) zinc finger CCCH-type containing 12D
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fab03019
]
101814405 (ZC3H12D)
Messenger RNA biogenesis [BR:
fab03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
101814405 (ZC3H12D)
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
zf-CCCH_4
zf-CCCH_2
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
101814405
NCBI-ProteinID:
XP_016152547
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All DBs
Position
3:47401144..47410463
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AA seq
613 aa
AA seq
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MPAKMALASSISSKVAQPHSGKVSAAGGEVHQSKMDFFCKLGYGKQDICKVLKNLGQEAL
EDDVLKELIRMGSKPQALESQAQPSQLKLVARGSCSTTAGLKWLGEDGSDSSDSLRPIVI
DGSNVAMSHGNKEVFSCWGIQLAVDWFRDRGHTYIKVFVPLWRKEPPRQDSPIADQHILE
ELEKQSVLVYTPSRKVKGKRVVCYDDRYIVKVAYEKDGVIVSNDHYRDLQNENPEWKWFI
EQRLLMYSFVSNRFMPPDDPLGRHGPTLSNFLSKKPVLPEKKWQPCPYGKKCTYGNKCKF
YHPERQHQAQLSVADELRAKTKVPLAPGKEEERCQCSPYAARGEPAPRDAGTEALREARG
CSGPCCYPGPSQGSRSEQTFRAWASSPGSELGLEPRLAQPEPLLERMAAVSIRDGTHGWC
LCSSGDRGASDSPHRCAELRHRLLSLRHPRGLDRARCPCQRGALPAAPGGMCPGHGWARE
PPGSRSIPGGAQRTQPLEPRHPALLQPTALAPARLPLYREQQLQQHRCSHSQPPAQQPLQ
PDPSHGTGLFQKAHTYPSASYRDYWPSPAARPPSARQMSTHRELCSPYPYSVMSQVMTMY
PSIQDKGTGAPPL
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctaaaatggcactggccagttcaatttctagcaaagtagcacaaccacactcc
ggaaaagtttctgcagcagggggggaagtgcaccagagcaagatggattttttctgcaag
ctgggctatggtaagcaggacatctgcaaagtgctgaagaacctgggccaagaggccctg
gaggatgatgtgctgaaagagctgattcggatggggagcaaacctcaggctctggagagc
caggctcagccttcccagctaaagctggttgcccgtggatcgtgtagcaccacagcaggg
ctgaagtggcttggagaagatggaagtgattcttctgattccttgagacccattgtgatc
gatggcagcaatgttgcaatgagtcatggaaacaaggaggtgttctcctgctgggggatc
cagctggcagtggactggtttcgagacagggggcacacttacatcaaagtctttgtccca
ctctggagaaaggagccccctcgacaagacagccccattgcagatcagcacattcttgag
gagctggaaaagcaatctgtcctggtctacacaccctctaggaaggtgaaagggaagagg
gtggtgtgctatgacgatcgctacatagtgaaagttgcttatgagaaggacggagtcatt
gtttccaatgaccactaccgggatctccagaatgaaaaccccgagtggaaatggttcatt
gagcagcgactactcatgtactcttttgtcagtaacaggttcatgcctcccgatgatcca
ttaggcaggcacggacccaccttaagtaacttcctcagcaaaaagccagtgcttcctgag
aagaaatggcagccttgcccttatggtaaaaaatgcacctatggcaataaatgcaaattt
taccatccagagagacaacatcaggctcagctttcagtggctgatgagctcagggccaaa
acgaaggtcccgttagccccggggaaagaggaggagaggtgccagtgctcaccatacgca
gccagaggagagcccgcgccccgcgatgccggcacggaagctctgcgggaagccagaggc
tgctccgggccctgctgctacccgggcccgtcccagggcagccgttctgagcagacattc
cgtgcctgggccagcagccccggctccgagctggggctggagccgcgcctggcgcagccg
gagccgctcctggaaaggatggcagccgtgtccatcagggatggcacccacggctggtgc
ctgtgctcctccggggacaggggggcctcggacagccctcaccgctgcgctgagctcagg
cacagactgctgtcgctccgtcacccgcggggcttggatcgcgcccggtgtccctgccag
cgcggagcgctcccggccgcgccaggcgggatgtgcccggggcacggctgggctcgggag
ccccccgggagccgctccattcccggcggtgctcagcgcacacagcccctggagccccgg
caccccgctctgctgcagcccacggctctggccccggccaggcttcccctgtacagggag
cagcagctgcagcagcaccgctgctcccacagccagcccccagcacagcagcccttgcag
ccagatcccagccatggaacaggcttattccagaaagcccacacttaccccagtgcctcg
taccgggactactggcccagcccagctgcaaggccaccctctgcccggcaaatgagcaca
cacagggagctgtgctccccttacccttacagtgtgatgagccaggtcatgactatgtac
cccagtatccaggataaggggactggagcacctcccctgtga
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