Ficedula albicollis (collared flycatcher): 101814548
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Entry
101814548 CDS
T02815
Symbol
PIF1
Name
(RefSeq) PIF1 5'-to-3' DNA helicase
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fab03032
]
101814548 (PIF1)
03029 Mitochondrial biogenesis [BR:
fab03029
]
101814548 (PIF1)
Enzymes [BR:
fab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
101814548 (PIF1)
DNA replication proteins [BR:
fab03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
101814548 (PIF1)
Mitochondrial biogenesis [BR:
fab03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
101814548 (PIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
AAA_19
AAA_22
UvrD_C_2
Herpes_Helicase
AAA_16
ABC_tran
AAA_7
Mg_chelatase
AAA
APOBEC4_like
Motif
Other DBs
NCBI-GeneID:
101814548
NCBI-ProteinID:
XP_005050364
LinkDB
All DBs
Position
8:<13925288..13932554
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AA seq
426 aa
AA seq
DB search
GEEVLGAVRSGKSVFFTGSAGTGKSFLLKRIVGSLPPNITYATASTGVAACHIGGTTLHA
FAGIGSGKAPLEQCIQLAERPGVRQHWLACQHLIIDEISMVDGKFFDKLEAVARAVRKRD
EPFGGIQLIICGDFLQLPPVCKANEETKFCFQAKSWRKCIHINMELTEVRRQTDKTFVSL
LSAIRLGRCTEEVTRLLMQTAAHRSERDGILATRLCTHKDDVEITNERRLQQLPGEVHVF
EALDSDPMLVKLIDAQCPVGGRVELKLGAQVMLAKNLDVSQGLVNGARGVVVGFESEQKG
LPKVRFLCGVTQLIKMEKWVIKGPSGVHLSRQQLPLKLAWAISIHKSQGMSLDCVEISLS
RVFESGQAYVALSRARSLAGLRVLDFDPKVVRADPAVLQFYRQLRRHQLPTQGSLHTHSE
VDEKEN
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
ggggaggaggtgctgggcgccgtgcggagcgggaagagcgtcttcttcaccggctctgca
gggactgggaagtcgttcctgctgaagaggatcgtgggctccctccctccgaacatcacc
tacgctacggccagcacgggcgtggcggcttgtcacatcggcggcactactctccatgcc
tttgcagggatcggctctgggaaggcaccgctggagcagtgcattcagctggcagagcgg
ccaggggtgcgccagcattggctggcctgccagcacttaattattgatgagatctcaatg
gtggatggcaagttctttgacaagctggaggcagtggcaagggcagtcagaaaacgggat
gagccttttggaggaattcagctaattatctgtggggatttcttacagctacccccagtc
tgcaaggctaatgaagaaaccaagttctgcttccaggcaaaaagctggagaaaatgcatc
cacataaacatggagctgactgaagtgcggagacagactgacaagacctttgtctcactc
ctcagtgcaatccgtttaggcaggtgcacagaggaggttaccagactgctgatgcagacg
gctgctcacaggtctgagcgtgatgggatcctggctacgcggctctgcacccataaagat
gatgtagaaataaccaatgagagacgcttgcaacagctgccaggagaagtgcatgtgttt
gaggctttggacagtgacccaatgctagtgaagttaattgatgctcagtgtcctgtgggt
ggtagagttgagctaaagctcggagctcaggtgatgttagcaaagaatctggatgtgtct
caggggctggtgaatggagcacgaggtgttgttgtagggtttgaaagtgaacagaagggg
ctgcctaaggtgaggtttctctgtggggtcacacagctcataaaaatggaaaaatgggtc
atcaaaggaccatcaggagttcatctgagtcgtcagcaattacctttaaaattggcatgg
gccatttccattcacaagagtcagggcatgtctttggactgtgtggagatctccctgtct
cgtgtctttgagagtgggcaggcttacgtagccctgtcccgagcccggagcctcgcaggg
ctccgtgttctggattttgacccaaaagtagtgagagctgatcctgctgtgctgcagttc
tacagacagctgagacgtcatcagcttccaacccagggttcactacacacccattcagag
gttgatgagaaggagaactga
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