Ficedula albicollis (collared flycatcher): 101814567
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Entry
101814567 CDS
T02815
Symbol
SOGA1
Name
(RefSeq) suppressor of glucose, autophagy associated 1
KO
K27704
microtubule cross-linking factor
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fab03036
]
101814567 (SOGA1)
Chromosome and associated proteins [BR:
fab03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
101814567 (SOGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
TPR_MLP1_2
TSC22
Motif
Other DBs
NCBI-GeneID:
101814567
NCBI-ProteinID:
XP_016158714
LinkDB
All DBs
Position
20:complement(3010456..3035984)
Genome browser
AA seq
1576 aa
AA seq
DB search
MSLELGLSGSDGESPGSAPPPPPSAGEASPLPEEPSAASVASSRLQLSTSLAFSDLTEEL
LDGGTDGLLRELEDLRSENDYLKDEIEELRAEMLEMRDVYMEEDVYQLQELRQQLDQASK
TCRILQYRLRKAERRSLRVAQTGQVDGELIHSLEQDVKVAKDVSVRLHNELEVVEKKRIR
LEEENEELRQRLIETELAKQVVQNEMDKLRENSLKKRGSRSMGKTEKKPSVQEDSADLKC
QLHFAKEESALMCKKLTKLAKENDGMKEELLKYRSLYGDLDSSLSVEELADSPHSREAEL
KVHLKLVEEEANILSRRIVELEVENRGLRAEMDDMKGQGDRELPGQDSRFLLGASSCGDA
GDTVAELRRHLQFVEEEAELLRRSLLELEEQNKLLLSELTKYKSEHELDVTLSEDSCSVV
SEPSQEELATAKVQISELSGKVKKLQYENRVLLSNLQRCDLASCQSTRPMLETDAEAGDS
AQCVPPAGWRDGEADGQDRALGSGKVPDGPAKLLKPKDLETLLGIRDQATLVSKAIDVLI
SDANGFTSGLKACLDNECAGVLLGEAVGSAADSPSDAKLMNVLLMRLGVLQQDLGCFVRK
VDHLTGGFKEHVDSFPFSSPSSHEVTKEGLPKEHASDSHEVTKEGLQKEHASDFQQPDFR
DADPFRPPHTKDVDPAHPRSYKTCRAEENDSYATEMKELQLVLSEANESLRGLQEQLSQE
RQLRKDEVDNFSQKICQLKEDHQKALLRREFELQSLNLQRRLEQKFWSQEKNLLVQESQQ
FRQSFLLLFMKLKWFLKRWRQGKVVHSEGEDFLEVNSMKELYLLLEEEELAPQQQADNKM
CAGDSWTPNTPNECIKTLADMKVTLKELCTELREERRGAGELQQQFTKAKAAWEMERAEL
KCHIAQLESKAGKGIAERALPDWKVALKREREEHQHLLAESYSAVMDLTKQLQISEKNWN
QEKVELLARFKEEQQQAEQQAKDLQNKLNQLQKGSSPWALKHSEMEKHGSNWKEALNEKI
TDKETISEAKAKGTNLKRTKSVSSMSEFESLLDCSPYLPGKNVPGLGDHARGKKASSTTQ
MLPNGIRDSASLPPSNCTYVNIEQPAPDSLAKEKLDISSWDYSQASSLSGHDPAQKQIQR
SYTAPDKTGIRIYYSPPVVRRLEAPLVHNKEGKIMIEPGFLFTMAKPKEPEQSASAEGTY
SQWLCNFSKQQQELLDGGAGDGAVPPVPRFPPSLHELEISGNMSDDMKEITNCVRQAICS
SSLERKVKSTSSQTVGLAHVGTQTIQTVSVGLQTDLPRGAGVHGKSWSPRSSSLVSVRSK
QISSSLDKVHSRIERPCCSPKYGSPKLQRRSSSKLDASKDRSLWNLHQSKQNGSAWARST
TTRDSPVLSNINDGLSSLFSVVEHAGSTESIWKPGCPESGRAKPEAPKYGLVQEFFRNVC
GRAQSPTAPQEKKEAAGEESKRAEHPGPASHHPAENFSRVLNKKVLKQGSCEDTKPLSAG
QASKDAALRDPDLISAIASEDTACDCSSQSLTSCFARPSRSAVRHSPSKCKLHAAEPPRA
EEKPGASTCNVKPSAF
NT seq
4731 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctggagctggggctgagcggcagcgatggcgagtccccgggcagcgccccgccg
ccgccgccctcggccggagaggcgtcgccgctgcccgaggagccctcggccgcctcggtg
gccagcagccgcctgcagctcagcacctcgctcgccttctccgacctcaccgaggagctg
ctggacggcggcaccgacgggctgctccgcgagctggaggacctgcgctccgagaacgac
tatctcaaggatgagatcgaggagctgcgtgccgagatgctggagatgcgggacgtgtac
atggaggaggacgtgtaccagctgcaggagctgcggcagcagctggaccaggccagcaag
acgtgccgcatcctgcagtaccggctgcgcaaggccgagcgccgcagcctgcgcgtggcg
cagaccggccaggtggacggagagctcatccacagcctcgagcaggacgtcaaggtggcc
aaggacgtctctgtgcggctccacaacgagctggaggtggtggagaagaagaggatccgg
ctggaggaggagaacgaggagctgcgccagcggctgatcgagaccgagctggccaagcag
gtggtgcagaacgagatggacaagctccgagagaactccctgaagaagcgggggtctcgc
tccatgggcaagactgagaagaagccatcagtgcaggaggacagtgcagacctgaagtgc
cagctgcattttgccaaggaggagtcagccctgatgtgcaagaagctgaccaagctggcc
aaggagaacgatggcatgaaggaggagctgctgaagtacaggtccctgtacggggatctc
gacagctcgctctccgtggaggagctggctgactcgccccattcccgggaggctgagctg
aaggtccacctcaagctggtggaggaggaagccaacatcctgagccggaggatcgtggag
ctggaggtggagaaccgcgggctgcgggcggagatggacgacatgaagggccagggggac
agggagctgccggggcaggactcccggttcctgctgggcgcctcgagctgtggggacgcg
ggggacacggtggccgagctgcgccggcacctgcagttcgtggaggaggaggccgagctg
ctgaggcgctcgctgctggagctggaggagcagaacaagctgctcctgagcgagctgacc
aagtacaagtcggagcacgagctggacgtgacgctgtccgaggacagctgctcggtggtc
agcgagccctcgcaggaggagctggccacggccaaggtgcagatcagcgagctcagcggc
aaggtgaagaagctgcagtacgagaacagggtgctgctctccaacctgcagcgctgcgac
ctggcctcctgccagagcacccggcccatgctggagaccgacgccgaggccggcgactcg
gcgcagtgtgtgccccccgccggctggagggacggcgaggccgacgggcaggacagggcg
ctgggcagcgggaaggtgcccgacggccccgccaagctgctcaagcccaaggacctggag
actttgctgggcatccgagaccaggccacgctggtcagcaaagccatcgatgtcctgatt
tcggatgccaacgggttcacctcggggctgaaggcttgcttggacaatgagtgtgcgggg
gtgctgctgggcgaggcagtgggcagcgctgctgacagccccagcgacgccaagctgatg
aacgtgctgctgatgcggctgggcgtgctccagcaggacctgggctgctttgtgaggaag
gtggatcacctcactggcggcttcaaggagcacgtggactcgttccccttctccagcccc
agcagccacgaggtcaccaaagaggggctgccgaaggagcacgcctccgacagccacgag
gtcaccaaagaggggctgcagaaggagcacgcctccgacttccagcagcctgattttagg
gacgccgaccctttccgcccgccccacaccaaggacgtggaccccgcccatccccggagc
tacaaaacctgccgggctgaggagaacgactcctacgccaccgagatgaaggagctgcag
ctggtgctgtcggaggccaacgagagcctgcgggggctgcaggagcagctctcacaggag
aggcagctgaggaaggacgaggtggacaacttctcacagaagatctgccagctgaaggag
gaccaccagaaagcactgctgcgacgggagtttgagctgcagagcctgaacctgcagagg
cggctggagcagaagttctggagccaggagaagaacctgctggtgcaggagtcacagcag
ttcaggcagagcttcctcctgctcttcatgaagctcaagtggttcctcaaacgctggcgc
cagggcaaggtggtgcacagtgagggcgaggactttttggaggtgaacagcatgaaggag
ctgtacctgctgctggaagaggaggagctagccccgcagcagcaggcagacaacaagatg
tgtgctggggacagctggacccccaacacgcccaacgagtgcatcaagactctggcagac
atgaaggtgaccctgaaggagctgtgcacggagctgcgggaggagcggcgcggtgccggc
gagctgcagcagcagttcaccaaggccaaggctgcctgggagatggagcgtgctgagctc
aagtgccacattgcccagctggagtcaaaggccggcaaaggcatcgcagagcgggcactg
ccagactggaaggtggcactgaagagggagcgagaggagcaccagcatctcctggcagag
tcctacagtgctgtcatggacctcaccaagcagctgcagatcagcgagaagaactggaac
caggagaaggtggagctgctggctcgcttcaaggaggagcagcagcaggcagagcagcaa
gcgaaggacctgcagaacaaactcaaccagttgcagaaaggatccagtccatgggcattg
aagcactctgaaatggagaagcatggcagcaactggaaagaggctctcaatgagaaaatc
acagacaaggagacaatctctgaagcaaaagccaagggaaccaacctcaaaaggaccaag
tctgtttcctccatgtcagagtttgaaagcttgctcgactgttctccctacctccctgga
aagaatgtgccagggctgggtgaccatgcccggggcaaaaaggcatcctcaaccacgcag
atgctgcccaatgggatccgggacagcgccagccttcctccttcaaactgtacatatgtg
aatatcgaacaacctgcccctgacagcctggccaaggagaagctggacatctcctcctgg
gactactcacaggcaagcagcctctcggggcacgacccagctcagaagcaaatccagagg
agctacacggcgcccgacaagacagggatccgcatctactacagcccgccggtggtgcgc
cggctggaggcgccgctggtgcacaacaaggagggcaagatcatgatcgagcccggcttc
ttgttcaccatggccaagcccaaggagccggagcagtcggccagcgccgagggcacctac
agccagtggctgtgcaacttctccaagcagcagcaggagctgctggacggcggcgcgggg
gacggcgcggtgccgccggtgccgcgcttcccgccctcgctgcacgagctggagatctcc
ggcaacatgagcgacgacatgaaggagatcaccaactgcgtgcgccaggccatctgctcc
agctcgctggagaggaaggtgaagagcacctccagccagacggtggggctggcccacgtg
ggcacgcagaccatccagacggtcagcgtgggcctccagaccgacctgccccgcggcgcc
ggcgtgcacggcaagagctggtccccgcgcagctcctccctcgtgtccgtgcgcagcaag
cagatctcctcctccctggataaggtccactccaggatcgagcggccgtgctgctcccca
aaatacggctctccgaagctccagaggaggtcttcctccaagctggacgcctccaaggac
aggagcctgtggaacctgcaccagagcaagcagaacggctctgcctgggcccgctccacc
accacccgcgacagccccgtcctcagcaacatcaacgacgggctgtccagcctgttcagc
gtggtggagcacgcgggcagcaccgagtccatctggaagccgggctgccctgagagcggc
cgggccaagcccgaagcacccaagtacggcctggtgcaggagttcttcaggaacgtctgc
gggcgggcgcagagccccaccgcgccccaggagaagaaggaggccgctggggaggagagc
aagagagctgagcaccccggccccgccagccaccacccggccgaaaacttctcccgcgtc
ttgaacaagaaggtgctcaagcagggcagctgcgaggacaccaagcccttgtccgctggc
caggccagtaaggacgcggccctgcgggaccccgacctcatctcggccatagccagcgag
gacacggcgtgcgattgcagctcccagtccctcacctcctgctttgcccggccttcccgc
tccgcggtgcgccactccccctccaagtgcaaactgcacgccgcggagccccccagggcg
gaggagaagccgggggcctcgacctgcaatgtaaaaccaagtgcattttaa
DBGET
integrated database retrieval system
