Ficedula albicollis (collared flycatcher): 101814733
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Entry
101814733 CDS
T02815
Symbol
VPS54
Name
(RefSeq) VPS54, GARP complex subunit
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
fab01009
]
101814733 (VPS54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fab04131
]
101814733 (VPS54)
Protein phosphatases and associated proteins [BR:
fab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101814733 (VPS54)
Membrane trafficking [BR:
fab04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
101814733 (VPS54)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
EXOC6_Sec15_N
SBP_bac_6
Motif
Other DBs
NCBI-GeneID:
101814733
NCBI-ProteinID:
XP_005042940
UniProt:
A0A803VQD0
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All DBs
Position
3:complement(9371396..9421369)
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AA seq
976 aa
AA seq
DB search
MASSHSSSPVPQTNSSDAFFKKEVDATKRFRPVQSLPDVCPKEPTGNPNNLHDSPSLVVD
QQRWTIYHSKVNLPAALNDPRLAKRESDFFTKTWGVDFVDTEVTPSFYLPQITKEHFALY
QQEITPREKVHERCKNIGTPKDTFDRTLLHTHDKSRTDLEQVPKIFMKPDFALEDSLTFN
AVLPWSHFSTAGGKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHE
LQDYLRKTSQAVKLLREKIAKIDKVMCEGSLRVLRLSLTRNNCIKAYNKLKLMATVHQTQ
PTVQLLLSTSEYVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFST
YARNDLNRPLEDDCQILEEERLVSLVFGLLKQRKLNFYEIYGDEMINTAKNIIKQCVVNT
VSQIEEIDTEVVVKLADQMRMMNFPQWFDLLKNIFSKFTIFLKRVKATLNTIRSVVFLVL
DKNQKNRDLEDTLQKNSAKESMVDSEVAYLTHEGMFISDAFGDGELPAGAADSASQRNTS
PNSEPCSSDSVSEPECTTDSSSSKEHTSSSVTPGGVEMMISDDMKLTDLELVRLANNIQE
LLYNASDICHDRSVKFLMARAKDGFLEKLNSNEFVTLSRLMEGFILDTEQICGRKSMSLR
GALQSQANRFVNRFHEERKTKLSLLLDNERWKQAEVPAEFQDLVDSVSDGRISLPEKKPT
ATEERKPAEFLIVEGQKYATVGTVLLLIRIILEYCQCVDNIPSITTDMLTRLSDLLKYFN
SRSCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPIIRAHFEARLQPKQFSMLR
HFDHITKDYHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMAKMHEAI
YDLLPEEQTQMLFLRINASYKLHLKRQLAHLNVVNDGGPLNGLVTSDVAFYTGNLQALKG
LNNLDLNMAEIWEQKR
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaagccacagttcttcaccagtgcctcagacaaacagcagcgatgctttcttt
aagaaagaagtggatgccacgaagcgctttcgccctgtgcagtccctgccggatgtgtgt
cccaaggaacccacaggcaatcccaataacttacatgacagcccatctctagttgtggat
cagcaaagatggactatttatcattccaaagtcaatctcccagcagcactaaatgatcct
aggttagcaaaaagggaatctgatttctttacaaaaacatggggagtggactttgtggac
actgaagtcacgccttcattctacctcccacagatcaccaaggaacattttgcattatac
caacaggaaatcactccgagagagaaggttcatgaaaggtgcaagaatattggtactcct
aaagatacctttgacaggacactattacacactcacgataaatccaggacagatctggaa
caagtacctaagatttttatgaaaccagattttgccttggaagattccttaacatttaat
gccgttttaccatggtctcattttagtaccgctggtggaaaaggaaatcgtgatgcagct
tcctccaagttacttcaagaaaagctgagccattatctggacatcgtggaagtaaatatt
gctcatcagatttctctccgctcagaagcattttttcatgcaatgacctctcagcatgag
ttacaggactacctcaggaaaacctcccaggctgtaaaattgcttagagagaaaatagct
aaaattgacaaagtaatgtgtgaaggatcgcttcgagttttaagactgtcactcaccaga
aataactgtataaaagcatacaataaactgaaattaatggctactgtacaccaaacacag
cccacagtacagttgctgctctccacttcggagtatgttggagctttggacttaatagca
acaacacaagaggtgttacagcaagagcttcaaggtattcacagtttccggcatcttggc
tcacagctttgtgaactggaaaagctgatagataaaatgatgattgcagagttttcaact
tatgctcgcaatgatttaaatagacccctagaagatgattgccaaattctagaagaggag
aggcttgtatctctagtatttggacttctaaaacaaaggaagctaaatttttatgaaatt
tatggagatgaaatgattaatactgcaaagaatataattaaacagtgcgtggttaatacg
gtatcgcagatagaagaaatagatacagaagtggttgttaagcttgcagaccagatgagg
atgatgaattttcctcagtggtttgatttactgaagaatattttttctaaattcaccatc
ttcctcaagagagtcaaggcaacgttaaatactatccgtagcgtggttttcttggttcta
gacaagaaccaaaaaaacagagacctggaggacacgttacagaagaactctgctaaggag
agcatggtggacagcgaggtggcctacctgacccacgaggggatgttcatcagcgacgcc
ttcggcgacggggagctcccagccggagcggccgactcggcctcccaaaggaacacctcc
cccaacagcgagccctgcagcagcgactccgtctcggagcccgagtgcaccaccgactcc
tcgtccagcaaggagcacacctcctcttctgtcactccaggaggagtggagatgatgatc
agtgacgacatgaaactgacggacctggagctggtcaggctggcaaacaatatccaagag
ttactttataacgcctctgatatctgccatgatcgttcagtcaagttcctcatggcaaga
gcaaaggatggcttcctagagaagctgaattccaacgagtttgttactctttctcgcttg
atggaaggctttatcttggatactgagcagatctgtggcaggaaaagcatgtccttgaga
ggagctcttcagagtcaagccaacagatttgtgaataggtttcatgaggagaggaagaca
aaactaagcttgcttttggacaatgagcgctggaagcaagctgaagttcctgctgagttc
caggacctcgttgattcagtgtcagatggcagaatttctctccctgaaaagaaaccaaca
gctactgaagaaagaaagccagctgaattccttattgttgaaggacaaaaatatgcaaca
gttgggacagtattgctgctaataagaataatcctagagtactgccagtgtgtggataac
attccttccatcaccactgacatgctgacccgcctgtcggatttactgaagtatttcaac
tctagaagttgccaattagttcttggagccggtgcattacaagttgttggcttgaaaaca
atcactacgaaaaatctagccctttcttcacgttgcctccagctcattgtacactacatt
cccattatcagggctcattttgaagctcggctgcagccaaagcagttcagcatgctcagg
cattttgaccacatcacaaaggattatcacgaccacatagctgaaatttcagcaaagctc
gttgccataatggatagcttatttgacaaactattatccaagtatgaagtgaaagcccct
gttccttcagcatgtttcaggaatatctgcaagcaaatggcaaagatgcatgaagctata
tatgatctccttcctgaggagcaaactcagatgttgtttttacgaatcaacgcaagctac
aaactccacctgaagaggcagctggcacacctcaacgtggtcaatgatggaggacctctg
aacgggctggttacttcagatgtggctttttacactggaaaccttcaagctctgaaaggc
cttaacaacttagatctaaacatggctgaaatctgggagcagaagaggtga
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