Ficedula albicollis (collared flycatcher): 101814774
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Entry
101814774 CDS
T02815
Symbol
TOPORS
Name
(RefSeq) TOP1 binding arginine/serine rich protein
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fab04121
]
101814774 (TOPORS)
03036 Chromosome and associated proteins [BR:
fab03036
]
101814774 (TOPORS)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
fab03037
]
101814774 (TOPORS)
Enzymes [BR:
fab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101814774 (TOPORS)
Ubiquitin system [BR:
fab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101814774 (TOPORS)
UBL E3 ligases
101814774 (TOPORS)
Chromosome and associated proteins [BR:
fab03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
101814774 (TOPORS)
Cilium and associated proteins [BR:
fab03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
101814774 (TOPORS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
101814774
NCBI-ProteinID:
XP_005061177
LinkDB
All DBs
Position
Z:complement(46782655..46786333)
Genome browser
AA seq
991 aa
AA seq
DB search
MTSDKEFAENSNFSPKASTSKLPTDASPDSKCPICLDRFDNVAYLDRCLHRFCFRCVQEW
SKNKAECPLCKQPFFSIFHTIRAEDDFKEYILSPLETSSFASPDGRRFRYRTTLTRERRT
RSSPSRGMLSPPDNGMLFEGLSGEPTRHRHREIQQMIRRLASRRKASAEGRSLRQIQEED
MINFRRALYRTGVRIRSIQDGGRYREISAEFFRRNPACLHRLVPWLKRELTVLFGAHGSL
INIVQHIIMSNVTRYDLESQAFADDIKPFLLNRTEHFLHEFISFARCPFNLEAYDQHANY
DCPAPSYEEGSHSDSSIITISPDVAFPQGPDNSLSVPGLAQAPWDDETPGPSYSISEEVR
ATIASPLESSESSDEDSATGSQRAKLQTEIQANADSNDSGSSSDNCVIVGYVKPLAERTP
EVVELSSDSEDSIKEEKKEDVKKQRPVECHSWSDSEPSRSFSPHSPTYREDVGICRSCLS
PAVEKTESKEDEKNKCKRKDLPPPDLSWSPSPGSDTVCSPWNHRLSKKGKSRSPQSCSRD
SRGSHGHRSRREHHSKSQLKRRRSRSRDSSKHRSKRSSRRSRAHDSRASLKSQRGSLSGE
STPSREVSRSRSRSKGHSKRRSRSRDSDRYYVRDSYQSRHQWGSAFCSRKVFGDSYESSS
RRRTRSNTLYSRQSASPEYRIRSFIERTDLHSQRGLHERHYYCYERCRSRSRSSNRSRTP
SGGTDRMKSEKPGGKRKYKTRHLESAFMESTSLERENDSKKTSSKFSDLCKNEDSLSDNR
ASSETKHKKRKKKMRSPSVEIVYEGKATDTTRHLKKKKKKHKKKHRKHHTSNSVHSSPVV
ITIDSDSSKEPESTEWDSSITWAGATQINEREDESPSAFLSRTACEETGGADKKCGIPTA
REDLDGGVRNADVKLQETVDQSVTTANDSSNTSHAETVASYVQEAPAAPSSQLPSPRTSF
LECPEREPLILRLPKRLVSRSSWFDFPEEKM
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgacttcagataaggagtttgcagaaaatagcaatttttcgccaaaagccagcaccagt
aagctgccgacagatgcatctcccgactccaaatgccccatctgcctggatagatttgac
aacgttgcctatctagatcgctgcttgcataggttctgcttccgctgtgtccaagaatgg
tcaaaaaacaaagcagagtgcccgctctgcaagcagccctttttttccattttccatacg
attcgtgctgaagatgactttaaggagtacatcctcagccctttagaaacgagctctttt
gccagccctgatggccggaggtttcgttatcgcaccaccttaaccagggagcggcgcacg
cgcagctccccttcccgagggatgctgtcccctccagataacgggatgttgtttgaaggc
ttgtcaggcgagccaacgcggcacaggcacagagagattcagcagatgatcaggaggctg
gcctcgaggagaaaggcgagcgcagagggcagatctctgcggcagatccaggaggaggac
atgatcaacttccgcagggctctgtaccgcactggcgtgcgcatccgcagcattcaggac
ggcggccggtaccgggagatttcggcagagttcttccgccgcaatcctgcttgccttcac
cgcttggtcccttggctgaagcgagagcttacagtcctgtttggtgcccacggatctttg
atcaacattgtgcagcacatcatcatgagcaacgtcactagatacgatctggaaagtcag
gcctttgctgatgatataaagccgtttttgctgaatcggacagagcacttcctgcacgaa
ttcatcagttttgctcgttgtccttttaacttagaagcatatgatcagcatgccaattac
gactgtcctgcaccatcatacgaggaaggaagccattccgactcctcgattattacaata
tctccagacgtggcgttcccacaagggccagataatagcttgtctgtgcctggtcttgct
caggcgccctgggatgacgaaactcctgggccttcctattccatttcagaagaggttcgt
gcaaccatagcttctcctctggagtcgtcagaaagttctgatgaggactctgctacaggg
agtcaaagagccaaactgcagactgagatacaggctaatgctgactcaaacgacagtggc
tcttcctcagacaactgtgtcattgttgggtatgtgaagccgttagctgagaggacacca
gaagtggtggagctgtcctctgactccgaggattccatcaaggaagagaaaaaggaagat
gtcaagaagcagcgaccggtcgagtgtcacagctggagtgacagtgaaccaagcaggagc
ttctcaccacattccccaacatatagggaggatgtaggaatttgtagaagctgtttatct
cctgcagttgagaagactgaatcaaaagaggatgagaagaacaaatgtaaaagaaaagat
ctgcctccaccggacttgagttggagcccgtctccagggagtgacacggtatgctcccct
tggaatcacagattgtctaaaaagggaaagtccaggagcccacagtcctgttcacgggac
agtcgaggcagtcatggccatcggtctagaagagagcaccacagcaaaagccagcttaaa
aggaggcgatcaagaagcagagatagtagcaaacatagaagcaaaagaagcagcagaagg
tcaagggctcatgacagcagagcctctctgaaaagccagaggggctctctaagtggtgag
agcactccatccagagaagtgagtagatcacgttcacgtagcaaaggccacagtaaaagg
agatcaagaagtagagatagcgatcgctattatgtaagagacagttatcaaagtagacac
cagtggggttctgctttctgtagtcgaaaggtgtttggagacagctatgaatcttccagc
agaaggaggacccggtctaacactctttactcaaggcagtctgctagtccagagtacagg
atacgatcatttattgagaggacagatctgcatagccagaggggactccatgagagacac
tattactgttatgagagatgcaggtcaaggagtcggtcaagcaacagatcaagaactcct
tctggaggaactgaccgaatgaaaagcgaaaagcctggtggaaaaaggaagtacaaaact
cgccacctggagagtgcattcatggagagcacaagtctagaaagagaaaatgactccaag
aaaacttcctcaaagtttagtgacctctgtaaaaatgaagatagcctgtcagacaatcgt
gcaagcagtgagacaaagcataagaaaaggaagaagaaaatgaggagtccaagtgtagag
atagtctatgaaggaaaagcaacagacacaacgaggcatcttaaaaagaaaaagaaaaag
cataagaagaaacaccggaaacatcacacgagtaactctgtacattcttctccagtggtg
attactattgatagtgatagtagcaaggagccagaaagtactgaatgggacagcagtatt
acatgggcaggggcaactcagataaatgagagggaagatgagtctccatctgcatttctg
agcaggacagcatgtgaggaaactggaggagcagacaagaagtgtggtatccctactgca
agggaagacttagatggtggtgttagaaatgctgatgtcaaacttcaagaaacagtagat
cagagtgttaccacagcgaatgacagcagtaacacctctcatgcagaaactgtagccagt
tatgttcaggaagcaccagcagcgccttccagtcaactgccttcccccaggacttccttc
ttagagtgtccagagagagagccattgatactaagactgccaaagagacttgtcagcaga
tcctcgtggtttgatttccctgaagaaaaaatgtaa
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