Ficedula albicollis (collared flycatcher): 101814799
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Entry
101814799 CDS
T02815
Symbol
HDX
Name
(RefSeq) highly divergent homeobox
KO
K24884
highly divergent homeobox
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fab03000
]
101814799 (HDX)
Transcription factors [BR:
fab03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
101814799 (HDX)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
PEX15_N
Motif
Other DBs
NCBI-GeneID:
101814799
NCBI-ProteinID:
XP_016153677
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All DBs
Position
4A:4536752..4571155
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AA seq
713 aa
AA seq
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MSILSVITGTNESCASCKCYSFRSSFQSISFSFQMNLRSVFTVEQQRILQRYYENGMTNQ
SKNCFQLILQCAQETKLDFSVVRTWVGNKRRKMSSKSAVESGGTPPGTAPATPSVPPEAA
VRNVVNIARSQSQQSSWTSSNNDVIVTGIYSPGSSSGRPGAAKHMNASMAELHKTSIPWL
PGKSDADFQQQHIPLGRQVPHCKNASLLVGEKTIILSRQTSVLNSANSIYSHTKKGSSVQ
TAELVLPQKPMICHRPCKAEPLGCQRLHKAGPAAQAPPGPRAQPREPACGGQNLEIREVF
SLALTEQPQRLLAAGGAHKPAPEGGCLSIAMETGDVEDEYAREEELASMGAQIQSCSRFC
EGGGSGQSRGGGCGAQLGSARDVPDNLLYHSREFQLPARTSLHTAPSTIYNTNSAARSTF
SPHFTSSSQLRLSQNQNNYQISGNLTVPWITGCSRKRALQDRTQFSDRDLATLKKYWDNG
MTSLGSVCREKIEAVAAELNVDCEIVRTWIGNRRRKYRLMGIEVPPPRGGPADFSDQSEF
VSKSALNPGEETATEVGDDNDRNDEVSICLSEGSSQEETNEALQNEEIGHKDDDQNPVST
DNVKIEILDDGESDLTSNSEVDQMSSLLDYKNEEVRFIESQLENHKQKYFELQSFTRSLI
LAIKSDDKEQQQALLSNLPPELEEMDFNHTSPEPDDTSFSLSSLSEKNASDSL
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatcctcagtgttatcacaggcacaaatgagagctgtgcctcctgcaagtgttac
agcttccgttccagctttcagagtatctccttttcctttcagatgaatctgcgttctgta
tttactgtagaacagcaaaggatattacagcgttactatgaaaatggaatgacaaatcaa
agtaaaaattgctttcagctcattttacagtgtgcacaagaaactaaactggatttcagc
gtggtcaggacgtgggttggcaacaagcggcggaagatgagcagcaagagcgccgtggag
tctgggggcacccccccggggactgcccctgccactccctccgtgccccccgaagcagca
gtgagaaacgtggtaaacattgctcgatcccaaagccagcagtcctcttggacctcttct
aacaacgacgtgatagtgactggtatctacagcccgggcagctcctcgggccggccggga
gccgccaagcacatgaacgcctccatggcagagctgcacaaaacctccatcccctggctg
ccgggcaagagcgacgcagacttccagcagcagcacatccctctgggacggcaagtaccc
cactgtaaaaacgcctccctcttagtgggggaaaagaccatcattctgtccaggcaaacc
agcgtgctcaattctgccaactccatctacagtcacacgaagaaaggctcctcggtgcag
acggcggagctggtgttacctcagaagcccatgatctgccacaggccctgcaaggccgag
cccctgggctgccagcgcctgcacaaagccgggccggcggcgcaggcgccccccgggccc
agggctcagccccgggagccggcctgcggcggccagaacctggagatccgcgaggtgttc
tcgctggccctcaccgagcagccccagcgcctgctggcggccggcggcgcgcacaaaccc
gccccggagggcggctgcctgtccatcgccatggagacgggcgacgtggaggacgagtac
gcccgtgaggaggagctggcctccatgggagcgcagatccagagctgctcccgcttctgt
gagggcggcggctccggccagagccgcggcgggggctgcggggcgcagctgggcagtgcc
agggacgtgcccgacaacctcctgtaccacagcagagagttccagctgcctgcgcggacc
tcattgcacacagcacccagcaccatttacaacaccaacagcgctgccagaagtaccttt
tctcctcattttacatcttcaagtcaactgaggctgtcacaaaaccaaaataattaccag
atttcaggaaaccttactgtgccttggattacaggttgttccagaaaaagagcattacag
gaccgcacacaatttagtgaccgagacttagctaccctaaagaaatactgggacaatggc
atgaccagcctgggctcagtctgcagagagaaaattgaagctgtggctgcagaattaaat
gttgactgtgaaatagttcggacttggattgggaatcgaagacggaaatatcgtttaatg
gggattgaggtcccaccccctagaggaggtcctgctgatttctctgatcaatctgaattt
gtttctaaatcagcacttaatccaggagaggaaactgctactgaagtgggggatgataat
gataggaatgatgaagtatcaatctgcttatctgaaggaagctcacaagaagagacaaat
gaagctcttcaaaatgaagaaattggccacaaagatgatgaccagaatccagtttccact
gataatgtgaaaatcgaaattttagatgatggagagagtgatctgaccagcaattctgaa
gtggatcagatgagttctcttttggattacaagaatgaagaagtcaggttcatcgagagt
cagctggagaaccacaaacagaaatattttgagctgcagtcgtttacccggagtttgata
cttgcaattaaatcagatgataaggaacagcagcaggctctgctttcaaacttacctcct
gaacttgaagaaatggatttcaaccacacatccccggagcccgacgatacctcattcagc
ctctcatccctgtcagagaaaaacgcctcagacagtttgtga
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