Ficedula albicollis (collared flycatcher): 101814896
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Entry
101814896 CDS
T02815
Symbol
SNAPC4
Name
(RefSeq) small nuclear RNA activating complex polypeptide 4
KO
K09453
snRNA-activating protein complex subunit 4
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fab03000
]
101814896 (SNAPC4)
03021 Transcription machinery [BR:
fab03021
]
101814896 (SNAPC4)
Transcription factors [BR:
fab03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
101814896 (SNAPC4)
Transcription machinery [BR:
fab03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
101814896 (SNAPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
SANT_DAMP1_like
SLIDE
Rap1_C
Motif
Other DBs
NCBI-GeneID:
101814896
NCBI-ProteinID:
XP_016158094
LinkDB
All DBs
Position
17:9539812..9553395
Genome browser
AA seq
1499 aa
AA seq
DB search
MEVEIEDGSGDHDDDGDEDEDEDDDEDEDEDDDDIESLPQDPETCLQMNHVYQEVIKEKI
EEVELLIAQNKKQQKEIISELHGPKPAKAGDGRNLPPNVFLGHFMKPYFKDKITGIGPPS
NEDAKEKAAQGIKSFEQLHSTKWKTAEKTLLQKSVASDRLQRLLQPKLLKLSYWNQKLEK
VKTETEKQILEKQIKDLEQEIEEINQLPEGDLIGNRFDEHDWDKISNIHFDGQRSSEELR
KFWQNWEHPSINKKEWTEEEIEKLKQIAAKHNYLDWQTIAQELGTNRTAFQCLQKYQIYN
KDLKRKEWTKDEDQMLLELVQEMRVGSHIPYKKIAYYMEGRDSAQLIYRWTKSVDPSLKK
GAWTPEEDAMLMAAVEKYGEKDWYKIRREVPGRSDARCRERYLKVLHRNLKKGKWSLEEE
DQLIELVEKHGLGHWSKIASDLVHRTGSQCLSKWKHMIGSKKRCGASKRCHAEESSSPSE
SSSEEDMELDLADSSEEEGTSTKSNEECAVPSIDLWIPTGADTQEATRERYQIQSLLSAA
RAGAGSSCSDIPRAGCDRDRAADKSSELSTLLRGIGKSCSTDVLVKNPAEVMAKASQCGK
QVLQVSLEEVRTILRRNTGFQRKLMLKPPGSLLAKPPGEGAAAGQDAQGLQELPERAGRR
PRECWRKLSLNRRLLMAVTPWVGNVLLPCTVQAGSMAFYQTKAAAVHELVKSLSLSSTPL
FALLVRLFQIDTKGCMKIIKERKLRQLELLKANARSPQQASQNTDTSSGNSSQACSQRNS
QGGIPRNSVRRSALRARSSAPGALESCARAVQGAPPGQGQRQKPKTVSELLREKRLRQSQ
AKKALQRTVLVASPVLVSGPLIIQHPPQQIIPSAQAGSKPAAAAGTERQAQGSPVPTRTS
PAGSASALVPENCSSAVPEAGDSPGCSNGMDLQSSKKLKEEALESSPQGGVCPGVNPAAA
EKAPDLGGCNGQVPASSSASAVLQNQASVPHQMAVVPLGLVSGTNTLSLSTPVTCELKSN
GPQQTPVSLLPALVPPQAASPVIPNSILPFQWVVIPQTLLPSTVQTAVGAPQGMPAAAGK
SQCQTNVTSNGNVSALGGTLVPAGAKPPHPSSAETKGPSSQLAGAPLGKAADQSTIPLPL
PSVCPGSTTSSVSVVTPACSDGSSMAPDSSAAPAASSAPCAIVLPQTQPPASPQGSDSQP
VPSLTSLGRSSGCITTNGSSFSPDSSRTETVLWPAPAAPHCNVSGNSACSRAQELRNRPI
ASKPPSADVPPQPSTSSAEKNLLDFSLISMEDEGLVKEWLTGKQGVQVPSLQTRLPYLPP
FICSIKTLSKLLVQKAALEEQAASLLPSEASGDGGTGDVFHAVGELVQQKLGDNPAYLLL
KARFLAAFTLPAVLATLPPPKVTTTLSASRKQHEDSDDEEWQSKKNVSEEESCGNELTGA
QDHWRNEDEPGDKDADLLNQGMRAEESPAQSALGSCTDVADARAPQIRRSARFKKRRRI
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggaaatagaagatggcagtggtgatcatgatgatgatggtgatgaggatgag
gatgaggatgatgatgaggatgaggatgaggatgatgatgatattgaaagcctgccccag
gatccagaaacctgcctgcagatgaaccatgtgtaccaggaagttatcaaggaaaagatt
gaggaagtggagctgctcattgcacaaaacaaaaaacagcagaaggaaatcataagtgag
cttcatggtccaaaaccagccaaggcaggagatggcagaaatctaccaccaaatgtgttt
ttgggtcattttatgaagccatactttaaggataaaataacaggaattggccctccttcc
aacgaagatgccaaggaaaaggcagctcagggcatcaaatcctttgaacagctgcattca
accaagtggaaaactgcagagaagacactgctgcagaaatccgtggcgagcgaccgcctg
cagcgcctgctccagccaaagctgctcaagttgagttattggaatcagaagttggagaaa
gtcaagactgaaacagaaaaacagatcttggaaaagcaaatcaaagacttggagcaagaa
atagaggaaattaaccaactcccagaaggtgatttaataggaaacagattcgatgagcat
gactgggacaaaatttcaaacatccatttcgatggacaacgtagctcagaagaactgagg
aagttttggcaaaattgggagcatccaagcatcaacaaaaaggagtggactgaggaggag
atagagaagctcaagcagatagctgctaaacacaactacctggactggcagaccattgcc
caggagctggggaccaacaggacagctttccagtgcttgcagaaataccaaatctataac
aaagatttaaaaaggaaagaatggaccaaggatgaggatcagatgcttttagagctcgtt
caagagatgagagtgggaagccatatcccatacaagaaaattgcttattacatggaagga
agagattctgctcagctgatttaccgctggacaaagagtgtggaccccagcttgaagaaa
ggagcctggacaccagaggaagatgctatgctgatggctgcagttgagaagtacggggag
aaggactggtacaaaatccgcagggaggtgccgggcaggagcgacgcccggtgccgggag
cggtatttaaaggtattgcacaggaatctgaagaaaggcaagtggagcttggaggaagag
gatcaactgattgaactggttgagaagcatggcctgggtcactggagtaaaatagcttca
gacctggtacatcggactggttcccaatgcctgagcaagtggaaacacatgattggctct
aagaaaagatgtggggcgagcaaacggtgccatgctgaggagagctcgagcccttcagag
agcagcagtgaggaggacatggagctggacctggcagacagctcagaggaggaggggaca
agcaccaagagcaatgaggagtgtgcagtccccagcattgacctgtggataccaacaggg
gcagacacacaggaggcaaccagggagagataccaaatccaatccctcctctctgctgcc
agggctggtgcagggagcagctgcagtgacattccaagggcaggatgtgacagagacaga
gctgctgataaatcatctgagctcagcaccctgctgaggggcattggaaagtcctgttcc
acagatgtgctggtgaagaatccagcagaagtgatggccaaggcttcccagtgtggaaaa
caagtgctgcaggttagcctggaggaggtgagaacaatattaaggagaaacacgggattc
cagaggaaactgatgctaaaacctcctggcagccttttagccaagccccctggagagggt
gcagctgctggccaggatgcccaggggctgcaggagctgccagagagagctgggcgccgg
cccagggagtgctggaggaagctgagcctgaacaggaggctgctgatggcagtgacccct
tgggtgggcaacgtgctgctgccctgcactgtgcaggctgggagcatggctttctaccag
actaaagctgctgctgttcacgagctggtgaagtcactcagtctcagcagcactcccctg
tttgcactgctggttcgtctcttccagattgataccaaaggctgtatgaagattattaag
gagagaaagctgaggcagttggagctgcttaaggctaatgcaagaagccctcagcaggct
tcccaaaatacggacacttcttcaggcaactcatcccaagcttgttctcagaggaattcc
caagggggcatcccaaggaattctgtcaggagatctgccttgagagcacggagcagtgcc
cctggtgccttggagagctgtgccagagcagtgcagggagctcccccaggccaggggcaa
aggcagaagcctaaaactgtctcagaattgctgcgagagaagcgtttgaggcagtcccag
gccaagaaggccctgcagaggacagtgctggttgcctcaccagtgctggtttcagggcct
ttgataatccagcacccaccacagcaaatcattccctctgcacaagcagggagcaaacct
gcagcagctgctggcacagagagacaagcgcagggttcaccagtgcccacaaggacttct
cctgcaggttctgcttctgctcttgtgcctgaaaactgttcctcagcagtgccagaagct
ggggacagccctggttgctccaacgggatggatctacagtcaagtaagaaactaaaagag
gaagctctggaaagcagccctcaaggaggggtttgtccaggtgtgaatccagctgcagca
gagaaggccccggacctgggagggtgcaatggtcaggtcccagccagtagctcagcttca
gcagtgttgcaaaaccaggcttcagtgcctcaccagatggcagtggtgcctcttggcctg
gtgtctggcaccaacacattgtccctttccacaccagtcacctgtgagctgaagagtaac
gggccacagcagacaccagtgagcctgctgcctgctcttgtgcctccacaagctgcttct
cctgtgattcccaacagcatcctgcccttccagtgggttgtaatcccccaaactctgctc
cccagcactgtccagactgcggtgggtgctccccagggaatgccagctgctgctgggaaa
agccagtgtcagacaaatgtgacttccaatggcaatgtctctgctttgggagggactctt
gtaccagctggagcaaagccacctcaccccagcagtgcagagacaaaagggccaagttcc
cagctggcaggagctcctttgggaaaggcagctgaccagtccacaattcccttacctctg
ccctcagtgtgtcctggaagcaccacatccagtgtttctgttgtaacccctgcatgttca
gatggctcctccatggctccagactcctctgcagctccagctgccagctcagccccgtgt
gccatcgtgctgccccaaacacagccccctgccagccctcagggctctgattcccagcct
gtgcccagtctcaccagcttgggaaggagcagtggctgcatcacaacaaacggatcatcc
ttcagtccagacagcagcaggacagagactgtgctgtggccagcacctgcagctcctcac
tgcaatgtctcagggaactctgcttgctctcgtgcccaggaactgaggaacagacccatt
gcctccaaaccacccagtgctgacgttccccctcagccaagcacttccagtgcagagaag
aatctccttgacttcagcctgatctccatggaggatgaggggctagtgaaggagtggctg
actgggaaacaaggggttcaggtgccatcactgcagaccaggctgccttatctgccacct
ttcatctgcagcattaaaaccctctcaaagctccttgtgcagaaagcagctctggaagag
caggcagcctctctgctgccctctgaggccagtggggacgggggcactggggatgtgttc
catgctgttggagaactggtgcagcagaaactgggtgataaccctgcttacctcctgctg
aaagccagattcctggcagccttcacactcccagctgtcctggcaactctgcctcctcct
aaagtgacaacaactctgtcagccagcaggaagcaacatgaggacagtgatgacgaggag
tggcagagtaagaaaaatgtgtctgaggaggagagttgtgggaatgaattaacaggagca
caggatcactggagaaatgaggatgagcctggagacaaagatgctgatttactaaatcag
ggcatgagggctgaggagagccctgctcagtctgccttgggctcctgcactgatgtggct
gatgccagagctccccagatcaggagaagtgcccgcttcaagaagaggaggaggatatga
DBGET
integrated database retrieval system
