KEGG   Ficedula albicollis (collared flycatcher): 101814970
Entry
101814970         CDS       T02815                                 
Symbol
WDTC1
Name
(RefSeq) WD and tetratricopeptide repeats 1
  KO
K11807  WD and tetratricopeptide repeats protein 1
Organism
fab  Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:fab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:fab04121]
    101814970 (WDTC1)
Ubiquitin system [BR:fab04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     101814970 (WDTC1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML TPR_17 Beta-prop_WDR75_1st TPR_19 WD40_RFWD3 ANAPC4_WD40 TPR_2 Beta-prop_WDR90_POC16_2nd TPR_1 ANAPC3 TPR_11 Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_IFT122_1st TPR_6 NBCH_WD40 TPR_16 Barstar
Other DBs
NCBI-GeneID: 101814970
NCBI-ProteinID: XP_005058557
LinkDB
Position
23:7532629..7560238
AA seq 691 aa
MLGCTAALPTASPRLPHCKKMAKANITRDIIHRQIKERGALGFERHYHVTDPFIRRLGLE
AELQGHSGCVNCLEWNEKGDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANIFSVKFLP
HSGDRILITGAADSKVHVHDLTVKETVHMFGDHTNRVKRIATAPMWPNTFWSAAEDGLIR
QYDLRESSKRSEVLIDLTEYCGQLVEAKCLTVNPQDNNYLAVGASGPFVRLYDIRMIHNH
RKSMKQSPSAGVHTFCDRQKPLPDGAAQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPDG
TELLVNMGGEQVYLFDLTYKQRPYTFLLPKKCHTSGEVQNGKTSTNGVSNGIHLHSNGFR
LAEGRAHSSPQVELPPYLERIKQQANEAFACQLWTQAIQLYSKAVQKAPNNAMLYGNRAA
AYMKRKWDGDHYDALRDCLKAISLNPCHLKAHFRLARCLFELKYVAEALECLDDFKGKFP
EQAHSSACDALDRDINAALFSKSDNAEDKKGGGPIRLRATGRKDSISEDEMVLRERSYDY
KFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCL
QPHPSYCFLATSGIDPVVRLWNPRPESETLNGRVVLDMEGASQANQRRMNADPLEVMLLN
MGYRITGLSSAGAAGSDDEDSSEGQVQCRPS
NT seq 2076 nt   +upstreamnt  +downstreamnt
atgctcgggtgcacagcagctcttcccacggcttctcctcgtctgccccactgcaagaag
atggcaaaagccaacatcaccagagacatcatccacaggcagatcaaggagaggggagcg
ctgggcttcgagcgccactaccacgtcaccgaccccttcatccggcgcctggggctggag
gctgagctgcagggtcactctgggtgtgtcaactgtctggaatggaatgaaaaaggagac
ttgttggcctctggctctgatgaccagcataccattgtgtgggatcctctgcaccacaag
aaactcctttctatgcacacaggacacactgcaaacatcttttctgtcaagttcctgccg
cactcgggggatcgcatcctcatcaccggcgctgccgactccaaggtgcacgtgcacgac
ctgaccgtcaaggagaccgtgcacatgtttggggatcacaccaacagagtgaagcggatt
gccacggcccccatgtggccaaacaccttctggagtgcagcagaggatggcttaatcagg
cagtacgacctgcgggagagcagcaagcgctccgaggtgctgatagacctgactgagtac
tgtgggcagctggtggaggccaagtgcctgacagtgaacccccaggacaacaactacctg
gccgtgggggccagcggccccttcgtgcggctctacgacatccgcatgatccacaaccac
aggaagagcatgaagcagagcccctcagctggagtgcacaccttctgtgaccggcagaag
cccctcccggacggggcggctcagtactacgtggcagggcacctcccagtgaagctccca
gactacaacaaccggctgagggtcctggtggccacgtacgtgaccttcagccccgacggc
accgagctcttggtcaacatgggcggggagcaggtctatttgtttgatctgacatacaaa
cagcgaccatacacttttctcctcccaaagaagtgccacacttcaggggaagtgcagaat
ggaaaaacctccaccaatggagtgtccaacgggatccacctccacagcaacggcttccgc
ctggccgagggcagggctcacagcagcccccaggtggagctgcccccgtacctggagagg
atcaagcagcaagccaacgaggcctttgcctgccagctgtggacccaggccatccagctg
tacagcaaggctgtgcagaaagcccccaacaacgccatgctctacgggaacagagctgct
gcctacatgaaacgcaagtgggatggggaccattacgatgctctgagggactgcttgaag
gccatatccctgaacccctgccacctgaaggcccatttccgcctcgcccgctgcctcttt
gagctcaagtacgtggcagaagcactggagtgtctggatgactttaaagggaagtttcca
gaacaagcacacagcagtgcctgcgatgcactagacagggacatcaatgctgccctcttc
tccaagagtgataacgctgaagacaagaaggggggtggcccgatccggctgcgagccacg
ggccgcaaggactccatctcggaggacgagatggtgctgagggagcgcagctacgactac
aagttccgctactgcggccactgcaacaccaccaccgacatcaaggaggccaacttcttc
ggcagcaatgcccagtacatcgtcagcggctccgacgacggctccttcttcatctgggag
aaagaaaccaccaacctggtgcgggtgctgcagggggacgagtccatagtgaactgcctg
cagcctcaccccagctactgcttcctggccaccagcggcatcgacccggtggtgcggctc
tggaacccccggccggagagcgagaccctgaacgggcgcgtggtgctggacatggagggc
gcctcgcaggccaaccagcggcgcatgaacgccgacccgctggaggtgatgctgctcaac
atgggctacaggatcacggggctcagcagcgccggggccgcgggctccgacgacgaggac
agctcagaggggcaggtgcagtgccggcccagctaa

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