Ficedula albicollis (collared flycatcher): 101815038
Help
Entry
101815038 CDS
T02815
Symbol
NIPBL
Name
(RefSeq) NIPBL, cohesin loading factor
KO
K06672
cohesin loading factor subunit SCC2
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101815038 (NIPBL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fab03036
]
101815038 (NIPBL)
Chromosome and associated proteins [BR:
fab03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
101815038 (NIPBL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
Cnd3
Motif
Other DBs
NCBI-GeneID:
101815038
NCBI-ProteinID:
XP_005060563
UniProt:
U3JH84
LinkDB
All DBs
Position
Z:11841912..11992004
Genome browser
AA seq
2777 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLACRDEN
LVSQLVHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAILARNPNVFREKSMQNRYGVQS
GMMMSQFNISQNSMRGSPASSNYQQTTISHSPSSRFVPPQTSSGNRFLAQQNSPVPSPYA
PQSPAGYMPYSHPPSYTAHPQMQQASVSSPIVTAGMRNLHENKVSSQLSGSSANHHADNS
RHGSSEDYLQMVHRLSSDDGDPSIRNAASFSLRSPQSVCSPAGSDGALKGSRQPLIQQSQ
PPPYSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQTEKAAMYDIISSPSKDSTKLTL
RLSRVRSSDMDQQDDMLSGLENSSVSEGDIPFNVQYPGQTSKTPVTPQDVNRPLNAAQCL
PQHEQTAFLQAQQVPVLQQNTSVAAKQPQTPVVQTQQQVSQQGAITSYDEVELDALAEIE
RIERESAIERERFSKEVQDKDKPLKKRKQENKPPEAGGATGGNRAASQETGSAGNGARPA
LMVSIDLQQAGRADSQATVTQDLDTIKKPEEIKQYNDGFVCIPQEDTVGVLKFKPENHPE
IFRKKSDFESQKTDIQQNENRQMEFQQNETRRLETKYNEGKQLEVKHESRQMEMKQSETR
QIESKQNESRQMEMKHNEGKQNNGKQEIRQRPETPKQKSEGRPETPKQKSEGRPETPKHK
HDNRRDSSKPLSDKKIEISRHKLDVKSDPSRVKPESRPDPTKPRPDGRSVSDTPRRDHDS
LKQRSEDRGESERYRGDPSKIRRPEYLRSSNKNEHDSKHGIKSDGSKPEKFERKYRHESG
DSRFSSGDQKSRPDSPRIKQEGKGDSSKSRPDKPGFKSPNSKDERRTDGNKSKVDSNKAH
GDNKAEFPSYLLGGRSGALKHFVIPKIKRDKDGNVTQESRKTEFRGEHKDKVEKIGLVED
LNKGAKPVVVLQKLSLDDVQKFIKDREDKSRGSCFKPNKNKSSKPSKGSIDQSVLKELPP
ELLAEIESTMPLCERVKMNKRKRSTVNEKPKYAEISSDEDNDSEEAFESSRKRHKKDRDE
AWEYEEHDRRSSGDHRRSGHYHEGRRISGSGRYRNRSPDDSDMDDYSSPPSLSEVARKMK
KKEKQKKRKAYEPKLTPEEMMDSSTFKRFTASIENILENLEDMDFTAFGDDDEIPQELLL
GKHQLSELGSESAKIKAMGIMDKLSTDKTVKVLNILEKNIQDGSKLSTLLNHNNDTEDEE
RLWRDLIMERVTKSADACLTAINIMTSPNMPKAVYIEDVIERVIQYTKFHLQNTLYPQYD
PVYRVDPHGGGVLSSKAKRAKCSTHKQRVIVMLYNKVCDIVSSLSELLEIQLLTDTTILQ
VSSMGITPFFVENVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNF
RLNSSDTDGEPMYIQMVTALVLQLIQCVVHLPSAEKDSNSEEESNKKVDQDVLITNSYET
AMRTAQNFLSIFLKKCGSKQGEEDYRPLFENFIQDLLSTVNKPEWPAAELLLSLLGRLLV
HQFSNKSTEMALRVASLDYLGTVAARLRKDAVTSKMDQGSLARILKQVSGGDDEIQQLQK
ALLDYLDENTEIDASLVFSRKFYVAQWFRDTTMETEKAIKSQKDEDSSEGTHHAKDVETT
GQIMHRAESRKKFLRSIIKTAPSQFSTLKMNSDTVDYEDACLIVRYLASMRPFAQSFDIY
LTQILRVLGENAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVREAAVE
LLGRFVLCRPQLAEQYYDMLIERILDTGISVRKRVIKILRDICIEQPTFPKITEMCVKMI
RRVNDEEGIKKLVNETFQKLWFTPTPHHDKEAMTRKILNITDVVAACRDTGYDWFEQLLQ
NLLKSEEDASYKPVKKACTQLVDNLVEHILKYEESLSDSDNKGVNSGRLVACITTLFLFS
KIRPQLMVKHAMTMQPYLTTKCSTQNDFMVICNVAKILELVVPLMEHPSETFLATIEEDL
MKLIIKYGMTVVQHCVSCLGAVVNKVTQNYKFVWACFNRYYGALSKLKNQHQEDPNSTIL
TANKPALLRSLFTVGALCRHFDFDHEDFKGNSKVNIKDKVLELLMYFTKHSDEEVQTKAI
IGLGFAFIQHPSLMFEQEVKALYNNILSDKNCSVNLKIQVLKNLQTYLQEEDTRMQQADR
DWKKVAKQEDLKEMGDISSGMSSSIMQLYLKQVLEAFFHNQSNVRHFALNVIALTLNQGL
IHPVQCVPYLIAMGTDPEPSMRNKADQQLVEIDKKYAGFIHMKAVAGMKMSYQVQQAINT
CPKDPVRGFRHDESSSALCSHLYSMIRGNRQHRRAFLISLLNLFDDTAKTEVNMLLYIAD
NLACFPYQTQEEPLFIMHHIDITLSVSGSNLLQSFKESMVKDKKKERKPLSDEETDSDSN
SGSGSESEEEASKPRRLRKRVDSDSDSDEENDINAVMKCLPENSAPLIEFANVSQGILLL
LMLKQHLKNLCGFSDSKIQKYSPSESAKVYDKAINRKTGVHFHPKQTLDFLRSDMANSKI
TEEVKRSIVKQYLDFKLLMEHLDPDEEEEDGEVSASTNARNKAITSLLGGGSPKNNAAET
EDDESDGEDRGGGTSGSLRRSKRNSDSTELAAQMNESVDVMDVIAICCPKYKDRPQIARV
VQKTSNGFSVQWMAGSYSGSWTEAKRRDGRKLVPWVDTIKESDIIYKKIALTSANKLTNK
VVQTLRSLYAAKDGTSS
NT seq
8334 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcacgactcttgcagggattgctagtcttaca
gaccttttgaaccagctgcctcttccatcacctttacctgctaccacaacaaaaagtctg
cttttcaatggacggatagctgaagaggtgaactgccttctggcttgcagggatgaaaat
ctggtttcacagcttgtccacagtctcaatcaggtgtccacagatcacatagagttgaaa
gataaccttggcagtgatgatccagaaggggatataccagtcttgctgcaggctattctg
gcaaggaatcctaatgttttcagggagaaaagcatgcaaaacagatacggggtacaaagc
gggatgatgatgtcacagtttaatatttctcagaattccatgcgtggtagtcctgcatct
tccaattatcaacaaaccactatctcacatagcccttccagccggtttgtgccaccacag
acaagctctggtaacagatttttggcgcaacaaaacagtccagtgcctagtccatatgct
cctcaaagccctgcaggatacatgccatattcacatcctccaagttatacagctcatcct
caaatgcagcaagcatccgtatccagccccattgtcacagctgggatgagaaatctccat
gaaaataaagtttcaagtcagttgtctggaagttcagctaatcatcatgctgataattct
agacatggctcaagtgaagactacctacagatggtgcacaggctcagtagtgatgatggc
gatccttcaataaggaatgctgcgtctttttccttgaggtcaccacagtcagtctgctct
ccagctggaagtgatggagcccttaaaggatcaagacaacctttaatccaacaatctcag
cctccaccttattcatcacctagagatgttcccccagacatattgttagattctccagaa
agaaagcaaaagaaacaaaagaaaatgaagttaggcaaggatgaaaaagaccagactgaa
aaagctgcaatgtatgatatcattagctctccttccaaggactccactaagcttacatta
agactgtctcgtgtaagatcttcggatatggaccagcaggatgatatgctttctggtttg
gaaaacagcagtgtgtcagagggtgatattccttttaatgtgcagtacccaggacagact
tctaaaacacccgttactccacaggatgttaaccgcccactaaacgctgctcagtgtttg
ccgcagcatgaacagacagctttccttcaggcacaacaagtgcctgttttacaacagaac
acttcagttgctgcaaaacagcctcaaactcctgtggtacagacacagcaacaggtttcg
caacaaggagctataacgtcatatgatgaagtagaattggatgcattggctgaaattgag
cggatagaacgtgaatcagctattgaaagggagcgattttcaaaagaagtgcaagataaa
gataagcctctgaagaagcgaaaacaagaaaacaaaccaccagaggctggaggtgctact
ggaggaaatagagcagcttctcaggagacaggttctgcaggaaatggggcaaggccagca
ttgatggttagtattgatctgcagcaagcaggaagagcagactctcaggcaacagtaact
caggatttggataccatcaaaaaaccggaagaaattaagcagtataatgatgggtttgtg
tgcattccccaagaagacactgttggagttcttaagtttaaacctgaaaaccatccagaa
atttttaggaaaaagtcagactttgaaagtcaaaagacagatatccagcaaaatgaaaac
agacaaatggaattccagcaaaatgagaccagacggttggaaactaaatacaatgaaggc
aagcagttagaagtgaaacatgaaagcagacaaatggaaatgaaacaaagtgagaccaga
cagatagaatcgaaacaaaacgagagcagacaaatggagatgaaacacaatgagggaaaa
caaaacaatggcaaacaggaaatacggcagaggccagaaacgccgaaacagaagagtgaa
ggcagacctgaaacaccaaaacagaagagtgaagggaggcctgaaacaccaaaacacaaa
catgataataggagggactccagtaaacctttgtcagacaagaagattgaaatatctagg
cacaaactagatgtgaaatctgatccttcaagggtgaagcctgaaagtcgacctgatcca
acaaaaccgaggcctgatgggcgctcagtttctgatacaccaaggcgtgaccatgatagc
cttaaacaaagatctgaggacaggggagagtcagagagatacagaggcgatccatccaag
attagaaggccagaatatttgagatcctcaaacaaaaatgagcatgattctaagcatggt
attaaatctgatggttcaaaacctgagaaatttgaaaggaaatataggcatgagtctggt
gattcaaggttttcttctggggatcaaaaatcaagacctgacagccctcgtattaaacag
gaaggtaaaggggattctagcaaatcaagacctgataaacctggttttaagtcacctaac
agcaaggatgaacgaaggacagatggtaataagagtaaagtggatagtaataaagcacat
ggtgacaataaagcagagtttcccagttatttgttggggggaagatctggcgcattaaaa
cattttgtcattccaaaaatcaagcgtgataaagatggcaatgttactcaggagtcaagg
aaaactgaatttagaggtgaacataaggacaaagtagagaagattgggctagttgaagat
ctaaataaaggagctaagcctgtagttgtccttcaaaagctttccttggatgatgtgcag
aaatttattaaggacagagaagataaatcaaggggctcttgttttaaacctaacaagaac
aagtcatccaaacctagtaaaggtagcatagatcagtcagtgttaaaggagttgcctcct
gagctcctggcagaaattgaatccaccatgccactttgtgaacgtgtgaaaatgaacaag
cgcaaacgtagcacagttaatgagaaaccaaaatatgctgaaatcagttctgatgaagat
aatgacagtgaagaagcttttgaatcttctcgtaagagacacaaaaaggatagagatgaa
gcttgggagtatgaagaacatgacagaagaagttctggtgaccacaggagaagtggtcac
tatcatgaaggaaggaggatctctggtagtggccgttaccgtaatcgcagtcccgatgac
tctgatatggatgattattcttctcctcctagcctcagtgaggtggctagaaaaatgaag
aagaaagaaaaacaaaagaagaggaaagcttatgaacctaaactaacacctgaagaaatg
atggattcttcaaccttcaaaaggttcactgcttcaatagagaatattttggaaaatctg
gaagacatggattttacagcttttggtgatgatgatgaaattccacaggaattgctactg
ggcaaacatcagcttagtgagttgggtagtgaatctgcaaaaatcaaggcaatgggcatt
atggacaagctctcaacagataaaacagtaaaagtcctaaatattttggagaagaatatt
caagatggatcaaagctgtctactttacttaatcacaataacgacactgaagatgaggag
agattatggcgagatcttattatggaaagagtgacaaaatctgctgatgcttgtcttact
gctatcaatattatgacatcaccaaatatgcctaaagctgtatatattgaggacgtaatt
gaaagagttattcagtacacaaaatttcatttgcagaacactctctatcctcagtatgat
cctgtgtatagagtggatcctcacggtggtggtgttttaagttcaaaagcaaagcgtgcc
aagtgttccactcacaaacaaagagttatagtgatgttgtataacaaagtttgtgacatt
gtcagcagtttgtcagagttgctagagatacagcttctcacagatacaactattcttcag
gtgtcatcgatgggaataacacctttctttgtggaaaatgtcagtgaactacagttatgt
gccatcaaattagtgactgcagtgttctcccggtatgaaaaacacagacaactaatacta
gaagaaattttcacttcccttgcaagactaccaactagcaagaggagtttgagaaacttc
aggttaaacagcagtgacactgatggagagcctatgtacattcagatggtaacagcacta
gttctgcaacttattcagtgtgtggtgcacttaccatcagcagaaaaggattctaattca
gaggaggaatcgaacaagaaagtggatcaagatgtgcttattactaactcatatgaaaca
gccatgagaacagcacaaaacttcctttctatttttcttaagaagtgtggcagtaaacaa
ggggaagaagattacaggccactatttgagaactttattcaagatctactttcaacagtc
aataaaccagaatggccagctgcagagttactacttagcttactgggaaggctattggtt
caccagttcagtaacaaatctacagaaatggcattaagagttgcatcacttgactatctt
ggaactgttgcagcaagactgaggaaagatgcagtcactagcaaaatggatcaaggatct
ttagccagaatcctcaaacaggtttcaggtggagatgatgaaattcaacagctgcaaaag
gctttactagattatctggatgagaacacagaaattgatgcatcattagtgttttctcgg
aagttttatgtagctcagtggttccgtgatacaactatggagacagaaaaagcaattaaa
tctcagaaggatgaggattcatctgaaggaactcatcatgcaaaagatgttgaaaccaca
ggacaaatcatgcatagagcagaaagtcgcaaaaagtttcttcgcagcatcattaaaact
gctccatctcagttcagtacattaaagatgaattctgatactgtggactatgaagatgca
tgtttgattgttcgctacttggcctctatgaggccgtttgcccagagcttcgatatttat
ttgacacagattctgcgtgtacttggtgaaaatgcaattgctgttcgaacaaaagccatg
aagtgtttgtctgaggttgttgctgtagaccccagtattctagccaggctggatatgcag
cgaggagttcatgggcggctaatggataactccactagtgtacgagaagcagctgtggag
ctgcttggacgatttgtgctctgtcgtccccagcttgctgagcagtattatgacatgctg
attgaaagaatattggatactggtatcagtgtcagaaaaagagtaataaaaatacttaga
gatatctgcattgaacaaccaacctttcccaagattacagaaatgtgtgtgaaaatgatt
cggcgagtcaatgatgaagaaggcattaagaaattagtaaatgagacattccagaagctc
tggtttactccaactccgcaccatgacaaagaagcaatgacaaggaaaatactaaatatc
actgatgtggttgcagcttgtagagatacagggtatgattggtttgaacagcttcttcaa
aatctgttgaagtcagaggaggatgcctcatataaacctgtgaagaaagcctgtactcaa
cttgttgacaatttggttgagcacattcttaagtatgaagaatctttatcagattctgac
aacaaaggtgtgaattctggtcgcttggttgcttgcataaccactttgttcttattcagc
aaaataaggccccagctaatggtcaaacatgccatgaccatgcagccatacctgaccact
aaatgtagtacccagaatgatttcatggtgatctgcaatgttgcaaaaatcttagagctt
gtagtaccgctaatggagcacccaagtgagacctttcttgccactattgaggaagacctc
atgaaactcatcatcaaatatggcatgacagttgttcagcactgtgtgagctgtcttggg
gctgttgtgaacaaggtcacccagaactataaatttgtgtgggcctgttttaacagatac
tatggtgcactttctaaattaaaaaatcaacaccaagaagaccccaacagtactatactc
actgccaataagccagcactccttagatcacttttcactgttggagcactgtgtcggcat
tttgattttgatcatgaagattttaagggcaacagtaaggttaacattaaggataaagta
cttgaactgctgatgtattttacaaagcattcagatgaagaagtacaaacaaaagccatt
attggtcttggatttgcatttattcagcacccaagtttaatgttcgaacaagaagtgaag
gctctgtacaacaacattctttcagataagaactgttcagtaaacttaaaaatccaggta
ttaaaaaacctccagacctacttgcaggaggaggatacccgtatgcagcaggcagacaga
gactggaaaaaagtagcaaaacaggaagacctgaaagaaatgggtgatatttcctcaggg
atgagtagttccatcatgcagctatatctcaaacaggtccttgaggctttctttcataac
cagtccaatgtacgccactttgccctaaatgtcattgcactgacattaaaccaaggtctc
atccatcctgttcagtgtgtgccgtacttaattgctatgggcacagatccagagccctct
atgcgaaataaagctgatcaacagttggtggaaatagacaaaaaatatgctggattcatt
catatgaaagcagtggctggtatgaagatgtcttaccaagtacagcaggcaattaatacc
tgcccaaaagatcctgtgagaggttttagacatgatgaatcatccagtgcactgtgttca
cacctctactccatgattcgagggaaccgtcaacacagacgagcctttctaatttcttta
ctcaacctctttgatgatactgcaaaaacagaggtgaatatgcttttgtacatagcagac
aatctagcctgttttccttaccaaacacaggaagagccactgtttataatgcatcatata
gacattacactatcagtttctggtagcaacctactacagtcatttaaagagtctatggtg
aaagacaaaaaaaaggaaagaaagcctttatcagatgaggagactgacagtgacagtaac
agtggaagtgggagtgaaagtgaggaggaagcttctaagcctcggaggttacggaaacga
gtggactctgattcagattctgatgaagaaaatgatataaatgcagtgatgaagtgttta
cctgaaaattcagctcctttaattgaatttgctaatgtctcccaaggcatattattactt
ctgatgctgaaacagcatctaaagaacctctgtggattctctgatagtaaaattcaaaaa
tattctccatctgaatctgcaaaagtttatgataaagctataaacaggaagacgggagtg
catttccatccaaaacaaactttggattttctgcggagtgatatggctaattccaagatc
acggaagaggtgaagaggagtatagtaaaacagtacttagattttaagctccttatggaa
catttggatcctgatgaagaggaggaagatggagaggtgtcagctagcacaaatgctcgg
aacaaagcaattacctcgctgcttggaggaggcagccctaaaaacaatgcagctgagaca
gaggacgatgaaagtgatggggaggatagaggaggaggcacttcagggtcattgagaagg
tcaaaacgaaattcagactctacggagttggcagcacagatgaatgaaagtgttgatgtc
atggatgtcatcgctatttgctgtccaaagtacaaagaccgaccacaaattgcaagagta
gtacagaaaaccagcaatggcttcagtgttcagtggatggcaggctcctacagtggctcc
tggactgaggctaagcgccgtgatggccgcaaactggtgccttgggtagacactattaaa
gagtcagacattatttacaaaaaaattgctctaacgagtgctaataagctgactaataaa
gttgtgcagactttacgatcgctgtatgccgccaaggatggaacttccagctaa
DBGET
integrated database retrieval system
