Ficedula albicollis (collared flycatcher): 101815049
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Entry
101815049 CDS
T02815
Symbol
CNOT2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101815049 (CNOT2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fab03019
]
101815049 (CNOT2)
Messenger RNA biogenesis [BR:
fab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101815049 (CNOT2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101815049 (CNOT2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
101815049
NCBI-ProteinID:
XP_005039499
LinkDB
All DBs
Position
1A:35873356..35923319
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AA seq
526 aa
AA seq
DB search
MQVTNSMFGASRKKFVEGVDGDYHDENMYYSQSSMFPHRSEKDMLASPSTSGQLSQFGAS
LYGQQSALGLPMRGMSNNTPQLNRSLSQGTQLPSHVTPTTGVPTMSLHTPPSPSRGILPM
NPRNMMNHSQVGQGIGIPSRTNSMSSSGLGSPNRSSPSIICMPKQQPSRQPFTVNSMSGF
GMNRNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRNRREGSGNPTPLINPLAG
RAPYVGMVTKPASEQSQDFSIHNEDFPALPGSSYKDPTSSNDDNKSNLSTSGKTSSSTDG
PKFPGDKSSTTQNNNQQKKGIQVLPDGRVTNIPQGMVTDQFGMIGLLTFIRAAETDPGMV
HLALGSDLTTLGLNLNSPENLYPKFASPWASSPCRPQDIDFHVPSEYLTNIHIRDKLAAI
KLGRYGEDLLFYLYYMNGGDVLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTMKTNTY
ERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHLPSTFNYNPAQQAF
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgacaaacagcatgtttggtgcttcaaggaagaagtttgtagagggggttgat
ggtgactaccatgatgaaaacatgtactacagccaatcatcgatgttcccacatcggtca
gaaaaagatatgctggcatcaccatcaacatcaggtcagctgtctcagtttggggcaagt
ttatacgggcaacaaagtgcactaggccttccaatgaggggaatgagcaacaatacccct
cagttaaatcgcagcttatcacaaggcactcagttaccgagccacgtaacgccaacaaca
ggggtaccaacaatgtcacttcacacgcctccatctccgagcagggggatattgcctatg
aatcctaggaatatgatgaaccactcccaggttggtcagggcattggaattcccagcagg
acaaacagcatgagcagttcagggttaggcagccccaacagaagctctccaagcataata
tgtatgccaaagcagcaaccctctcgacaaccttttactgtgaacagtatgtctggattt
gggatgaacaggaatcaggcatttggaatgaataactccttatcaagtaacatttttaat
ggaacggatggaagtgaaaatgtgacaggactggacctctcagattttccagcactagca
gacagaaacagaagggaaggaagtggcaatccaactccattaataaaccctttagctgga
agggcaccctatgttggaatggtgacaaaaccagcaagtgagcagtcccaggacttttca
atacacaatgaagattttccagcattaccaggctccagctacaaagatccaacatcgagt
aatgatgacaataaatctaatttgagtacatcaggcaaaacatcatccagcacagatggg
cccaagtttcctggagataaaagttcaactacgcaaaacaacaaccagcagaaaaaaggg
atccaggtgttacctgatggtcgggttaccaacattcctcaagggatggtgacggaccag
tttggaatgattggcttgttaacattcatcagggcagcagagacagatccaggaatggta
catcttgcgttaggaagtgatttaacaacactaggtctcaatctcaactctcctgaaaat
ctttatcccaaatttgcatccccgtgggcatcatcaccttgtcgacctcaagacatagac
ttccatgttccatctgaatacttaactaacattcacattagggataagctggctgcaata
aaacttggccgatatggagaagatctcctgttttatctctattacatgaatggaggagat
gtattacagctattagcagcagtagagctatttaaccgggattggagataccacaaagaa
gaacgagtatggatcaccagggcacccggcatggagccaacaatgaaaaccaatacgtac
gagaggggaacatattacttctttgactgtcttaactggaggaaagtagctaaggagttc
cacctggaatatgacaaattagaagaaaggcctcatctgccatcaaccttcaactacaac
cctgctcagcaagccttctaa
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