Ficedula albicollis (collared flycatcher): 101815079
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Entry
101815079 CDS
T02815
Symbol
TPR
Name
(RefSeq) translocated promoter region, nuclear basket protein
KO
K09291
nucleoprotein TPR
Organism
fab
Ficedula albicollis (collared flycatcher)
Pathway
fab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101815079 (TPR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fab03019
]
101815079 (TPR)
Messenger RNA biogenesis [BR:
fab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101815079 (TPR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Intein_splicing
Motif
Other DBs
NCBI-GeneID:
101815079
NCBI-ProteinID:
XP_005049977
LinkDB
All DBs
Position
8:6388772..6422109
Genome browser
AA seq
2368 aa
AA seq
DB search
MAAVLQQLLERAELAKLPRAVQGKLERFLGDQQGEIDGLRARHERFKVDSEQQYFEVEKR
LAQSQERLVNETQECQTLREELKKLHEQLKMLNEKNKELEAAQDRNAAIQSQLSREKEEL
EAEKRDLVRTTERRSQEVEHLNEDVKRLNEKLTEANTERAKLQLKLDELQTSDVSMKYRE
KRLEQEKELLQNQNSWLNAELKAKTDELLHTAREKGNEILELKCSLENKKEEVSRMEEQV
NSLKQSNENLQKHVEELLNKLKEAKEQQASMEERFHNELNAHIKLSNLYKSAADDSEAKS
NELTGAVEELHKLLKEAGEANKAAQEHLAELEESKAAMEKELREKISKLEKELENANDLL
SATKRKGAILSEEELAAMSPTAAAVAKVVKPGMKLTELYNAYVETQDQLHMEKLENKRIN
KYLDEIVQEVEAKAPILKRQREEFERSQKAVASLSAKLEQAMKEIHRLQDSADQANKHAS
FFERESQRLEVRVKDLSQQTCVLLMELEEARGNHVIRDEAVSSADISSSSEVITQHLVSY
RNIQELQQQNQRLLVALRELGEAREKEEQETTSSKISELQSQLDEAVSELQQLRESRQHQ
LQLVESIIRQRDLFRILLTQTTGAIIPLQASGMLPEEICLTSTPKRPNLPQSMATPAPVS
MSESVETVEAKAALKQLQEVFENYKKEKAENDKLLNEQNEKLQEQVTDLRSQNAKISTQL
EFASKRYEMLQDNVEGYRREITSLHERTQKLTATTQKQEQIINTMTQDLRGANEKLAVAE
VRAENLKKEKDILKMSDVRLTQQRDSLLVEQRGQNLLLTNLRTIQGILERSETETKQRLN
NQIEKLEREISQLKKKLENEVEQRHSLTKNQEVHILDLKRQLETETNRHINTKELLKNAQ
KESAMLKQQLNNTEAQLTSQSSQRPSGKGQPSANEDVDDLVSRLRQAEEQVNDLRERLKT
SSSNVEQYRAMVLSLEESLNKEKLVTEEVRTTVETRLKESSEYQAQLEKKLMESEKEKQE
LQEEKRKAVENMEQQLSELKKSLSAVQSEVQEALQRASTALNNEQQARRDCQEQAMMASE
AQNKYERELMLHAADVEALQAIKEQVAKNAAVRQQLEEAAQKAESELLESKASWEERERM
IKDEASKLASRCEDLEKQNRLLHEQLESMSNKMVTSMKEAIPTAANVSLSEEGKSQEQIL
EILRFIRREKEIAETRFEVAQVESLRYRQRVEHLERELQELQDSLNAEREKVQVTAKTIA
QHEELMKKTETMNILIETNKMLREEKERLEQELQQIQAKVRKLEADILPLQESNAELSEK
SGMLQAEKKLLEEDVKRWKARTQHLLSQQKDTDLEEYRKLLSEKEANAKRVQQMSEETGR
LKAEVARTNASLTASQNLVQSLKDEVTKIRTEKDTLQKELDAKVADIQEKVKTITQVKKI
GRRYKTQYEELKAQHDKMVAEASALPLTEPQEDQVSAQEVQELKDTLSQAEVKTKNLETQ
VESLQKTITEKETEVRNLQEQIMQLQAELARFHQDLQEKTTQEEQLRQQIAEKEEKTRKT
LLAAKQKIAQLAGTKEQLTKENEEWKQKSSSLEEQKTELEVRMSALKSQYEGRICRLERE
LREQQERHHEQRDEPPESTNKAPEQQRQISLKSTPASGERGIASTSDPPTANIKPTPVVS
TPSKVTAAAIAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVETQEAMQSEGPVE
HVPVFGSASGSVRSTSPNVQTSLPQPILTVQQQTQATAFVQPTQQSHAQIEPAAQEPAPA
IVEVVQSSQIERPSTSTAVFGTVSATPSSSLSKRSREEEEDNTVENSDQISEETVDAPTS
KKLRIMQRVGPEEEVTAEESTDGEVEAQTYNQDSQDSIGEGVTQGEYVAMEDSEETSQSI
PIDLGSLQSDQQNTSSSQDGQSKRDDVIVIDSDDEDDDDEENEGEQEDYDDEEEEDEDDD
EDTGMGDEGDDSNEGTGSADGNDGYEADDAEGADGTDPGTETEESMGGAESNQRAADSQN
SGEGSTSAAESTFPHESLREQQPSSASERQGPRPPQSPRRPPHPLPPRLTIHAPPQELGP
PVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDGFAEAIHSP
QVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGRSVPTTPL
QVAAPVTVFTESASADASEHASQSVPMVTTSTGSLSTTTEPGAGDDADEVFAEAESEGIT
SEAGLEIDSQQEEESVQASDESDLPSTSQDPPSSSSADTSSTQPKSLRRVRLQPPTLRTG
VRGRQFNRQRGVTHAMGGRGGLNRGNIS
NT seq
7107 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtgctgcagcagctcctggagcgggccgagctcgccaagctgccccgcgcc
gtgcagggcaagctggagcgcttcctgggcgaccagcagggcgagatcgacgggctgcgg
gcccgtcatgagcgcttcaaggtggacagcgaacaacagtactttgaagtggaaaagcga
ctagctcagagtcaagaaagacttgtgaacgagacccaggaatgtcaaactctacgggag
gagcttaaaaagcttcatgagcagctgaagatgctcaatgagaagaacaaggagctggag
gctgcccaggaccggaatgctgccatacagagccagttaagtcgagagaaggaggaactc
gaggctgagaagagagacttggtccgaacaactgaaaggcgatctcaggaagttgaacat
ttaaatgaggatgttaaacgcttaaatgaaaagctcacagaggcaaacacagaaagggca
aaacttcagctgaagttggatgagcttcaaacatcagatgtttccatgaagtaccgggag
aaaaggctggagcaagaaaaagagctgctgcagaaccagaactcatggctgaatgctgag
ctgaaagccaaaacagatgaactgctccatactgccagggagaaaggcaacgaaatcctg
gagctcaaatgcagtctggagaacaaaaaggaggaggtttccagaatggaggaacaggtg
aacagcttgaaacagtcaaatgaaaacctccagaagcatgtcgaagaacttttgaataaa
ctgaaggaggcaaaagagcagcaggcaagcatggaagagagattccacaatgaactgaat
gcccacattaaattatctaacttgtataagagtgctgctgatgactcagaggcaaagagc
aatgagctgacaggagcagtggaagagctgcacaagctcctcaaggaagcaggtgaagct
aataaagcagcccaggagcatttggctgagttggaggagtcaaaagctgccatggagaag
gagctgagagagaagatcagtaagctggagaaggagctggagaacgccaatgatttactg
tcagctacgaagcgcaaaggagccatcctgtccgaggaggagctggcagccatgtctcct
actgctgcagcagtggccaaagtggtcaagcctggcatgaagttaactgaactgtacaat
gcctatgtagaaactcaggatcagttgcatatggagaagctggagaacaagagaattaat
aaatatttggatgaaatagtgcaggaagtagaagccaaagccccaatcttaaaacgtcag
cgtgaggaatttgagcgttcccaaaaagctgttgcaagtctgtctgcaaagcttgaacaa
gctatgaaggagatccatcgcttgcaggacagcgcagaccaagccaacaaacacgcctcc
ttctttgagagggagagccagagactggaagtgcgagtgaaggatctctcccagcagacc
tgtgtgctgttaatggaactggaagaagccagaggcaaccacgtgatccgagatgaagca
gtgagctctgctgacatcagcagctcttctgaagtgatcactcaacacctggtctcctac
agaaatatccaagagcttcagcagcagaatcagcgtctcctggtggctcttcgggagctg
ggggaggcaagagaaaaagaggagcaagaaacaacatcatctaagatctctgagctgcag
agccagctggatgaggctgtcagtgagctgcagcagctgcgggagtcgcggcagcaccag
ctgcagctcgtggaatccatcatccgccagcgggacttgttccgcatcctgctcacccag
accacgggggccatcattcctctgcaagcttcaggtatgttaccagaggagatctgtctt
acatctactccaaagcgtccgaatttacctcagtccatggcaactcctgctccagtgtcc
atgagtgagtccgtggagactgtggaggccaaggctgctcttaagcagttgcaggaagtt
tttgagaactataaaaaagagaaggcagaaaatgacaaacttctgaatgaacagaatgaa
aagcttcaggagcaggtcacagacttgaggtcacaaaatgccaagatatccacacagctg
gaatttgcctccaaaaggtacgagatgttgcaggataacgtggaaggctatcgccgggaa
atcacctccctgcacgagagaacccagaaactcacagcaaccactcagaagcaggagcag
atcattaacaccatgactcaagacctgaggggagctaatgaaaaactggcagtggcagag
gtgagagcagaaaatctgaagaaagagaaggatatcttgaagatgtcagatgtgcgcctg
actcagcaacgtgactctctgctggttgaacagagaggacagaacttgctgctcaccaat
ttgagaacaattcagggaatacttgagagatctgagacagaaacaaagcagagactcaat
aatcagatagaaaagctggagcgtgagatatctcagctgaagaagaaactggaaaatgag
gtggaacaaagacattcccttaccaagaatcaagaggttcatatcctggacctgaagagg
cagctggagacagagaccaaccgtcacatcaacacaaaggagctgctgaagaacgcccag
aaagaaagtgccatgctgaaacagcagctgaacaacactgaagcccagctcacatcccag
tcctcacaaaggccttcagggaaaggtcagcctagtgcaaatgaagatgtggatgatctt
gtaagtcgactgagacaagctgaggaacaagtcaatgacctgagagagaggctcaagact
agctccagtaatgtggagcagtacagggccatggttcttagcctggaggaatccctcaat
aaggaaaaactagtgacagaggaagttcgtacaacagttgaaactcgtctgaaggagtct
tcagaatatcaggcacagctggaaaagaagttgatggagtcagaaaaagaaaaacaagag
ttgcaggaggagaagcgtaaagctgtggagaatatggagcaacagctttcagaactgaag
aaaagcctgtcagctgtgcagtcagaagttcaggaagctcttcagagagccagcacagct
ctgaataatgaacaacaggccaggagggactgccaggaacaagctatgatggcttctgaa
gctcagaacaaatatgagcgggaactgatgcttcatgctgctgatgtggaggcactacag
gccatcaaagagcaagtcgctaagaatgcagcagtgaggcagcagctggaggaggctgct
cagaaagcagagtctgagctcttagaatccaaggcctcctgggaagagagagagagaatg
atcaaggatgaagcttcaaaacttgcgtcccgctgtgaggatctggaaaaacaaaatcgg
ttattacatgagcagctggagagcatgagcaataagatggtgacttccatgaaagaagcc
atcccaactgcagcaaatgtttctcttagtgaggaaggcaaatcccaggagcaaatcttg
gaaattcttaggtttatccgtcgggagaaggagattgcagagacgaggttcgaggtggcg
caggtggagagcctgcggtaccgccagagagtggagcacttggagagggagctccaggag
ctgcaggacagcctcaatgctgagagggagaaggtgcaggtaacagcaaaaaccattgca
cagcatgaagaattaatgaagaaaactgagaccatgaacatactcatagaaaccaacaag
atgttaagggaggagaaggagaggctggagcaagagctacagcagatacaagcaaaggta
cgcaagctcgaggcagacatcctgcctctgcaagagtcgaatgctgagctcagtgagaag
agtgggatgctgcaggcagagaaaaagctcttggaagaggatgttaaacgctggaaagcc
cgcactcagcacttactgagccagcagaaagacaccgatcttgaggagtatcgaaagctg
ctctctgagaaggaggcaaatgccaagcgtgtccaacagatgagtgaagaaacaggcaga
ctgaaagcagaagttgccagaactaatgcatctttgactgcaagccagaatcttgttcag
agcctgaaggatgaagtaactaaaataagaacagaaaaggacactttgcagaaagaactg
gatgctaaagtggctgacatacaggaaaaagtgaaaactataacacaggtcaagaaaatt
ggtcgcaggtacaagactcagtatgaggagctgaaagcacagcatgataagatggttgct
gaagcatcggctctgcctttgacagaaccacaagaagaccaggtttctgcccaggaagta
caagagctaaaagatactctcagtcaagctgaagtgaagacaaagaatttggagactcag
gttgaaagcttacaaaagacaataacagaaaaagaaactgaagttagaaatctccaggag
cagataatgcagctacaggcagaactggcccgtttccatcaagatctgcaagagaagaca
acgcaggaagaacagctcaggcaacagatcgctgagaaggaagagaaaacgaggaagacc
ttgcttgcagccaaacagaaaattgcacagttagctggtacaaaggagcagctcacaaag
gaaaatgaggagtggaagcagaagagcagctccctggaggagcagaagacggagctggag
gtgcggatgagcgccctgaagtcccagtacgaggggcggatctgccgcctggagagagag
ctccgggagcagcaggagcggcaccacgagcagcgggatgagccccccgagtccacaaac
aaggccccagaacagcagaggcaaatctcactcaagtctacaccagcttcaggtgaaaga
ggaattgccagcacttcagatcccccaacagcaaacattaaaccaactcctgttgtgtca
actcccagtaaagtgactgctgctgcaatagctgggaataagtctactccaagggccagc
atccgtccaatggtgactcctgccacagtaactaatcccaccactacccccacagccaca
gttatgccaacaacacaggtggagactcaggaagccatgcagtcagaaggacccgtggag
cacgtcccggtgttcgggagcgccagcggctccgtgcgctccaccagccccaacgtgcag
acatccttgccccagcccatcctgactgtgcagcagcagacacaggccactgcctttgtg
cagcccacccagcaaagccacgctcagatcgagcctgcagctcaggagccagcccctgcc
atcgtggaggtggtgcagagctcccagatagagaggccctccacctccacagccgtgttt
ggcacagtttcagctacccccagttcctcactgtctaaacgctcccgagaggaggaggag
gacaacactgtggagaactcagaccagatctctgaggaaacagtggatgcacctacttca
aagaaactgagaatcatgcagagagttgggcctgaggaggaagtgacagcagaagagagc
actgatggagaggtggaggcacaaacatacaatcaagactcacaagactccattggagaa
ggtgtgacacagggggagtacgtggccatggaggacagcgaggagacttcccagtctatc
ccaatagatctcggatcccttcagtcagaccaacaaaacacatcttcatctcaggatggc
cagtccaagagagatgatgtgattgtaattgatagcgatgatgaagatgacgatgatgaa
gaaaatgaaggggagcaggaagattatgatgatgaggaagaggaggatgaggatgatgat
gaagacacagggatgggagatgaaggagatgacagcaatgaaggaactggtagtgctgat
ggcaatgatggatatgaagcagatgatgctgagggtgctgatggtacagatcctggaaca
gagactgaagagagcatgggaggagctgaaagcaaccagagggcagcagattcccaaaac
agtggagaagggagcacgagtgctgcagagtccacgtttccccacgagagcctgagggag
cagcagccgtcgtcggcgtcggagcggcagggcccgcggcccccgcagtccccgcgcagg
ccaccgcaccccctgcccccccggctcaccatccacgcccctccccaggagctggggccc
ccagtgcagagaatccagatgactcgaagacagtcagtggggcgaggacttcagctgacc
cctgggataggtggaatgcagcagcacttctttgatgatgaggacagaacagttccaagc
acaccaactcttgtagttccacatcgtacagatggatttgcagaagccattcattccccc
caggtagctggagttcctcggttcagatttgggccccctgaagatatgccacaaaccagc
tccagtcactctgatcttgggcagctggcatcacaaggaggtttagggatgtatgaaacc
ccactattccttgcccacgaggaggaatcgggaggtcgtagcgtccccacaactccacta
caagtggcagcaccggtgacagtgttcacggagagcgcctcggccgatgcgtcggagcac
gcgtcccagtccgtgcccatggtcaccacctccaccggcagcctgtccaccaccaccgag
cctggcgccggcgacgatgccgacgaggtcttcgcagaggcagagtccgagggcattact
tcagaagcaggtctagaaattgatagccagcaagaagaagaatctgttcaagcatctgat
gagtcagatcttccttcaactagtcaggatcctccttcaagttcatctgcagacacgagc
agcactcagcccaagtccctgcgccgtgtgcgcctgcagcccccgacgctgaggacgggc
gtgcgtggccggcagttcaacaggcagaggggtgtaactcatgccatgggaggcagagga
ggcctgaacagaggaaacatcagttaa
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integrated database retrieval system
