Ficedula albicollis (collared flycatcher): 101815135
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Entry
101815135 CDS
T02815
Symbol
LRRTM1
Name
(RefSeq) leucine rich repeat transmembrane neuronal 1
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
101815135 (LRRTM1)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
LRR_NXF1-5
LRRNT
LRR_12
UL97
HemY_N
Motif
Other DBs
NCBI-GeneID:
101815135
NCBI-ProteinID:
XP_005045685
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Position
4:68379753..68382183
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AA seq
521 aa
AA seq
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MDFLLIGLCLNWLLRKPPGLILCTLGIFSKMLPAVNSGCPQLCRCEGRLLYCESLNLTEM
PRNLSGMMGLSLRYNSLSELHDGQFTGLMQLTWLYLDHNHICSVEGNAFQKLRRVKELTL
SSNKITQLPNTTFRPMPNLRSVDLSYNNLQSLEPDLFHGLRKLTTLHMRSNAIKFVPVRI
FQDCRSLKFLDIGYNQLKSLARNSFAGLFKLTELHLEHNDLVKVNLAHFPRLISLHSLCL
RRNKVTIVVNTLDWIWQLEKMDLSGNEIEYIEPHVFESVPHLKSLQLDSNRLTYIDSRVL
DSWKSLTSISLSANAWDCSRNVCALASWLSNFQGRYDSNLLCATPEYAQGEDVLDAVYAF
HLCEDDADPTSVNTFSPVTNNSEQTPGYGSATATYDAPDGDEDRTTYAVTITMPGENSEN
AVQIHKVVTGTMALIFSFLIVVLVLYVSWKCFPAGLRQLRQCFVTQRRKQKQKQTMHQMA
AMSAQEYYVDYKPNHIEGALVIINEYGSCSCHQQPARECEV
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggatttccttcttattggtctctgtttaaactggctgctgaggaagcccccggggttg
atattgtgtacgctgggtatcttttctaaaatgcttccagctgtgaatagtgggtgtcca
cagctctgtcggtgtgagggcaggcttttgtactgtgaatcactgaatctcacagagatg
cctcgcaacctgtcgggcatgatgggcttgtctctgcggtacaacagcctttcagagctg
catgatggacagttcacagggttaatgcagctcacgtggctctatctggatcacaatcac
atttgctcagtggaggggaatgcctttcaaaaattgcggcgagttaaagagctcaccctg
agttccaacaaaataacccaactgcccaacaccactttccgccccatgccaaacttgcgc
agtgtggatttatcgtacaacaacctacagtctttggagcctgacctgttccacgggctg
agaaaactgacaactttgcacatgaggtccaacgccatcaagttcgtgccagtgagaatt
tttcaggactgtcgcagcctgaagtttctagacataggatacaatcagttaaagagcctg
gctcgaaactcttttgcaggcttgttcaaactcactgagctgcacctcgagcacaatgac
ttggtgaaagtgaatttagcccattttcccaggctcatctccctgcactccctctgcttg
cgaaggaataaagttaccatcgtagtaaacactttggactggatatggcaactcgaaaag
atggatctctccggcaacgaaatcgaatacatcgaacctcacgttttcgaaagtgtacct
catctcaaatccctgcagctggactccaaccggctgacctacatcgactcccgagtcctg
gactcctggaagtccctgacgagcatcagcctgtccgccaacgcctgggactgcagccgg
aacgtctgcgccctggcctcctggctgagcaacttccagggtcgctacgacagcaacctg
ctgtgtgccacccccgagtacgcccagggagaggatgttttggatgccgtgtacgccttc
cacttgtgcgaggacgacgccgaccccacgagcgtcaacaccttctcgccggtgaccaac
aacagcgagcagacgccgggctatggctcggccaccgccacctacgacgcgcccgacggc
gacgaggaccggaccacgtacgccgtcaccatcaccatgcccggcgagaactccgagaac
gccgtgcagatccacaaggtggtgacgggcaccatggcgctgattttttccttcctcatc
gtggttttggtgttgtacgtctcctggaagtgcttcccagccggcttaaggcaactaaga
cagtgctttgtcacacagcgcaggaagcagaagcagaaacagaccatgcaccaaatggct
gccatgtcagcccaggagtattatgttgattacaaacccaaccacattgagggagccctg
gtgatcattaatgagtacggatcttgctcctgtcaccagcagccagcgagggaatgcgag
gtgtga
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