Ficedula albicollis (collared flycatcher): 101815137
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Entry
101815137 CDS
T02815
Symbol
MSH4
Name
(RefSeq) mutS homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fab03036
]
101815137 (MSH4)
Chromosome and associated proteins [BR:
fab03036
]
Eukaryotic type
Meiosis-specific proteins
Others
101815137 (MSH4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
nSTAND3
AAA_22
ATPase_2
AAA_28
AAA_30
IL2RB_N1
AAA_18
Motif
Other DBs
NCBI-GeneID:
101815137
NCBI-ProteinID:
XP_005048959
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All DBs
Position
6:37200823..37224890
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AA seq
915 aa
AA seq
DB search
GGTPGVGGRAEQTSRYTLGLLQTPHSSESTGVSSSRGAQLGGSGREDLAAGRAAGTSAAK
PAVSERGESYFGDKSSCVENANTLNLTSSSSVRDLSSTRIGKTPLSSGRSGCRSHTPLMG
YSVSSSSAVSAHSVASVIVAVVEGRGLARGEVGMASIDLKNPEMILSQFADNTTYAKVIT
KLKILTPLEIIMSNTACDAGNTTKLFSLVTEHFKNVTFTTVQRKYFNETKGLEYIEQLCA
SEFSTIFMEVQSKYYCLAAAAALLKYVEFIQNAVYAPKSLKVRFQGSEKTAMIDSSSAQN
LELVINNRDTRNGHTLLGVLNYTKTPGGSRRLRSNILEPPVDAETINTRLDCVQELLQDE
ELFFGLQAVISKFLDTEQLLSVLVQIPKQDTVKTAESKITNLIYLKHTLELVEPLKAALR
SCNTQLLKAYYSSLEDTRFGIILEKITSVINDDTRYTKGCLSMRTQKCYAVKPNINEFLD
IARRTYTEIVDDIAGMITQLAEKYSLPMKTSFSSARGFFIQMNADCSILPNGQLPSEFTK
ITKMKNTYSFTSADLIKMNERCQESLREIYHMTYLIVCKLLNEIYEHIHCLYKLSDIVSM
LDMLLSFAHACTLSDYVRPEFTDTLAIKQGWHPILEKIAMEKPVSNNTYLTEGNNFVIIT
GPNMSGKSTYLKQIALCQIMAQIGSYVPAEYCSFRIAEQIFTRIGMDDDIETNASTFMKE
MKEITYIIQNANDKSLIIIDELGRGTSAEEGIGICYAACEYLLNLKAFTLFATHFLELCH
IDALYPNVENYHFEVQHVRSSTGNKEKIAYSYTLSKGYTEEKNYGLKAAEVSSLPSSIIL
DAKEITNHIAEQILHRQKSTPEMMEQRAAYQLAMRLVQTARNSRLDPGSLRVYLKALKKK
YEASCPTARKNDKQQ
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
gggggcacgcccggtgtgggcgggcgggcggagcagacgtcccgctacaccctggggctt
ctgcagacgccgcacagctcggagagtaccggggtctcctcaagccgcggggcacagctg
ggcggctccggcagggaagacctcgcagccggccgtgctgccgggaccagcgcggcgaag
ccggcggtttccgaaaggggagaatcctattttggggacaaaagttcttgtgtagaaaat
gctaacactttgaatctcactagttcttcttctgtgcgagacctgagtagtacacgtata
ggaaaaacacctctctcttctggtagatctggctgcagaagccatacccctcttatggga
tattcagtttcatcctcctctgcagtttctgctcattctgttgcatcggttattgtagct
gtagtagaaggaagaggccttgccagaggtgaagtaggaatggccagtatagatttaaaa
aatcccgagatgatactatcacaatttgcagacaatacaacttatgccaaggttattact
aaactcaagattttaacaccactagaaataataatgtcaaatactgcttgtgatgcgggg
aatacaacaaaattgttcagtctggtaacagagcatttcaagaatgtgacttttacaact
gttcagagaaaatacttcaatgaaacgaagggtttggagtacattgaacaattgtgtgca
tctgaatttagcaccattttcatggaagtccaatcaaagtattactgtctcgcagctgct
gcagctttgctaaaatacgttgaatttattcaaaatgccgtttatgctcctaaatcactc
aaggtgcgtttccaggggagtgagaaaacagctatgatagattcatcatcagcacaaaat
cttgaactagtgattaataacagagatactcggaatggtcacacacttcttggtgtttta
aattacactaaaactcccggtggaagtcgaagacttaggtccaatatcctggaacctcca
gttgatgctgaaacaatcaacacacgactagactgtgttcaggaattactccaggatgag
gagctcttttttggtcttcaagcagttatctcaaaattcctggatacagaacaactactt
tcagttttggtacagattccaaagcaggatacagttaaaactgctgaatcaaaaataact
aatttaatctacctgaaacataccttagaacttgtggaacctctgaaagctgctttaaga
agctgtaacacacagctgctaaaggcttattacagttctcttgaagataccaggtttgga
attatacttgaaaagattacaagtgtaatcaatgatgatacaagatacacaaaaggatgt
ttgagtatgaggacccagaagtgctatgctgttaagcctaacatcaatgaattccttgac
atagctcgtagaacatacacggaaattgttgatgacatagcaggtatgataacacaactt
gcagaaaagtacagtctgccaatgaaaacaagtttcagctctgctcgtggattttttatc
cagatgaatgctgattgttcaatattacctaatggccagcttccttcagaatttacaaag
atcacgaaaatgaaaaacacgtacagcttcacttcagcagatttaataaaaatgaatgaa
agatgtcaggagtccctgagagaaatatatcacatgacctacttaatagtgtgtaaacta
ctgaatgagatctatgaacacattcattgcctgtacaagttgtctgacattgtgtctatg
ctggatatgctgctttcatttgcccatgcctgcactctgtccgattatgttcgtccagaa
tttactgatactttagcaatcaagcagggatggcatcccattcttgaaaagatagctatg
gaaaaacctgtgtctaacaacacgtacctgacagagggcaacaattttgtcattattaca
ggaccaaacatgagtggaaaatcaacatacctgaaacagattgctctctgtcaaattatg
gcacagattggttcttatgtcccagcagagtattgttcttttcgaattgcagagcagatt
tttaccagaataggtatggatgatgatattgaaacaaatgcatcaacgttcatgaaggaa
atgaaagagataacgtacatcatacaaaatgctaatgataagtcactcatcattatcgac
gagcttggcagaggtaccagtgccgaagaaggtattggcatttgttatgctgcctgtgaa
tatctgttgaacttaaaggcatttacactgtttgctacacatttcctcgaactatgtcat
atagacgctttatatcccaatgtggaaaactaccattttgaagtgcaacatgtgagaagc
agtactggaaataaggagaaaattgcttactcttacacactttctaaaggatatacagag
gaaaagaactatggactaaaagctgcagaagtgtcctccctaccatcatccataattttg
gatgcaaaggaaatcacaaatcacattgcggaacaaattttgcaccggcagaagagcact
cctgagatgatggagcagagagctgcataccagttagcaatgagattggttcagactgcc
agaaattctcgactggaccctggcagtttgcgtgtatatttgaaagccctgaagaaaaag
tatgaagccagttgtcctacagccagaaagaatgataagcaacagtaa
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