Ficedula albicollis (collared flycatcher): 101815187
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Entry
101815187 CDS
T02815
Symbol
FAM188A
Name
(RefSeq) family with sequence similarity 188 member A
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
fab
Ficedula albicollis (collared flycatcher)
Brite
KEGG Orthology (KO) [BR:
fab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fab04121
]
101815187 (FAM188A)
Enzymes [BR:
fab01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101815187 (FAM188A)
Ubiquitin system [BR:
fab04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
101815187 (FAM188A)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
101815187
NCBI-ProteinID:
XP_005040873
LinkDB
All DBs
Position
2:21835459..21906024
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AA seq
591 aa
AA seq
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MKELTAALTRRILGTLVDERLDITCQCALAVQKANCILGCITSTAARKFRKVIQPLYSNL
VRPHPQCCIQLWSAQCRKDMDVLKQVQRRATEMISRLSREDTVDAPLAEPLTRRSFECLS
SISAAHDRKDSKREHTPIRAGERPGPKADRSGNSPLPKPEEYEANSRFLKCGLVIPHSRF
VFSDSESTALEQFEGGPCAVIAPVQAFLLKRLFTSEKSTWRVCPEEEQKNLLCHTLCDIL
EMACSDNSESYCLATWIRGKTTEETASISESPAESSRQEEQPSALAVEELGFERFHALIH
KRAFKSFPELKDAVWDQYSAWTNRFGVLLFLYSVILTKGIENIKNEIEDATEPLIDPVYG
HGSQSLINLLLTGHAVSNVWDGDRECSGMKLLGIHKQATVGFLTLMESLRYCKVGSYLKS
PKFPIWILGSETHLTVFFAKDMALVAPEAPSEQARRVFQTYDPEDNGFIPDTLLEDVMKA
LDLVSDPEYVNLMKTKLDPEGLGIILLGPFLQEFFPEQDSRVSESFTVYHYNGLKQSNYN
EKVMYVEGTAVVMGFEEPMLQTDDTPVKRCLQTKWPYIELLWSTDRSPSLN
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaactgacagcagccttgacaagaaggattttggggacgctggtggatgagagg
ctggacataacgtgccaatgtgcccttgcagttcagaaagccaattgtatcttgggttgc
atcaccagcactgcagccagaaagttcaggaaggtgattcagcctctctactccaacctg
gtgagaccccacccacagtgctgcatccagctctggagtgcccagtgcaggaaggacatg
gatgtgctgaagcaggtccagagaagggccacagaaatgatcagcaggctgagcagggaa
gacacagtagatgcaccgttagctgaacccctgacacggcggtcttttgaatgccttagc
tccatttcggctgcacacgacaggaaggactccaaacgcgaacacacaccaatccgagct
ggggaacgtccaggcccaaaggctgaccgctcagggaacagccccctccccaagcctgaa
gaatatgaagcaaattcaagatttcttaaatgtggtttagtgataccacattcaagattt
gtctttagtgactctgaatcaactgcattagaacaatttgaaggtggcccttgtgcagtg
atagcacctgtgcaggcattccttttgaagaggctttttaccagtgaaaagtctacttgg
agagtctgtccagaagaggaacagaagaaccttctctgtcatacattatgtgatattttg
gaaatggcttgctctgataattctgagtcatactgtctggcaacatggataagaggaaaa
acaactgaagaaactgctagtatttctgaaagtcctgcagaatctagtcgtcaagaggaa
caaccttctgccttggctgtcgaagagcttggctttgagcgatttcatgcattaattcac
aaacgagcattcaaaagcttccctgaactgaaggatgcagtttgggatcaatattcagca
tggacaaacagatttggagtattgctctttctgtattctgtaatactgacaaagggtatt
gaaaacataaaaaatgaaattgaagatgcaactgagccattgatagatcctgtttatggt
catggaagccaaagtttgattaacctgttgttgacggggcatgctgtttctaacgtgtgg
gatggagacagagaatgttcaggaatgaaacttcttggcatacacaaacaggcaacagta
ggctttttgacattgatggaatctctgagatattgtaaggttggctcctatttgaaatct
ccaaaatttcccatttggatacttggcagtgaaacgcatctcacagtcttctttgccaag
gacatggcccttgttgctcctgaagcaccttcagaacaagcaagaagagttttccagaca
tatgaccctgaggataatgggtttatacctgacacactgctagaagatgtaatgaaggct
ctggaccttgtttcagatcctgaatacgtaaacctcatgaagaccaaattagacccagaa
gggctgggcatcatactactgggtccctttctgcaagaatttttccctgagcaggactcc
agggtttcagagtcattcactgtttaccattacaatggactgaagcaatctaattataat
gaaaaggtcatgtatgtagaaggcacagcagttgtcatgggctttgaagagcccatgctg
cagacggacgacactcctgtgaaacgctgcttgcagaccaaatggccgtacatagaactg
ctctggagcacagatcgatctccttccctgaactga
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